| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,021,050 | A→C | N322H (AAC→CAC) | fliM → | flagellar motor switching and energizing component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,021,050 | 0 | A | C | 98.7% | 250.1 / NA | 76 | N322H (AAC→CAC) | fliM | flagellar motor switching and energizing component |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (35/40); minor base T (1/0); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTG > NC_000913/2020818‑2021279 | gAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCAcc > 1:158605/1‑236 (MQ=255) aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGACCATTTGATTCACCCGATTTTaaa > 1:307592/1‑235 (MQ=255) aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTTCACCGATTTTCAAt > 2:671898/1‑236 (MQ=255) aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTaaa > 1:302345/1‑235 (MQ=255) cctgggccccaaGGTGCAGCATTCCCAGCTGGAGCGGGTCGCCAACTTGGCAGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATtct < 2:307592/224‑1 (MQ=255) ccTGGTGCCCCAGGTTCAGCATTCCCAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATtct < 1:610566/235‑1 (MQ=255) cTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGACGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTctct < 1:379942/236‑1 (MQ=255) cAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTAAGTATGCGTTACGGTATGACCATTTGTTTCACACGCATTTAAACTCTCTGAACGAgg > 2:386158/1‑235 (MQ=255) agcatgcaactctggaggtggTCGCCAACTTTGCCAATATCTCGCTACGCCTGTCGCAGATTTTAAACCTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc < 2:158605/224‑1 (MQ=255) agcaTTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGccc > 1:272411/1‑236 (MQ=255) atttcgcggtaggagctggTCGCCAACTTTGCCTATATCTGCCTCCGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCa < 2:555867/224‑1 (MQ=255) cacaGCTGGAGCTGGTCGCCAATTTGGCCGATTCCCCGCTACGCCTGTCGCAGATTTGAAAACTGACCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGa < 2:359212/236‑1 (MQ=255) acaGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATgcg > 1:223940/1‑234 (MQ=255) caGTTGGAGCTGGTCGCCAACTTTGCCGATACCTCGCTACGCCTGTCGAAGATTTTAAACCTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTTAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGt < 2:64876/236‑1 (MQ=255) tggagctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATTAGTGACa > 1:565054/1‑236 (MQ=255) gagctggTCACCAACTTAGCCGATACCCCGCTACGCCTGCCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGa < 2:245677/232‑1 (MQ=255) agctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGAc < 1:81346/232‑1 (MQ=255) gctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACTAGGAACAGCCCAAATGAGTGACATGa > 2:607341/1‑235 (MQ=255) tCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGaat > 1:245677/1‑232 (MQ=255) ccccactttcgCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGACCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc < 2:302345/225‑1 (MQ=255) cAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCgg < 1:380816/235‑1 (MQ=255) ttGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATg > 2:17761/1‑236 (MQ=255) tttcgcgttACGCCTGTCGGAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGGCGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGAcaacaa < 1:671898/228‑1 (MQ=255) tctcGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACg < 1:401654/236‑1 (MQ=255) cGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGGGACATGAATAATCCGGCCGATGCCAACAAAGGCGCACTg > 2:159081/1‑236 (MQ=255) cTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGAc < 1:221702/236‑1 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc > 1:767307/1‑182 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc < 2:767307/182‑1 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACCACAACGGCGCAATGGa > 1:366236/1‑232 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGa > 1:306580/1‑232 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGAt > 2:637823/1‑236 (MQ=255) tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAAAAGCCCAAATGAGTGACATGAATAATCCTGCCGATGACAACAACGGCGGAATGGACGaa > 2:489837/1‑235 (MQ=255) gCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCGGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCt < 1:548678/236‑1 (MQ=255) tGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTTGCGGCTGAATCGt > 2:588647/1‑236 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc < 2:755590/186‑1 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc > 1:755590/1‑186 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCt > 1:692838/1‑227 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTg > 2:509467/1‑236 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGAAATGGACGATTGGTGGGCTGAAGCGTTg > 1:115580/1‑236 (MQ=255) aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAATGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCt < 2:692838/227‑1 (MQ=255) ggCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGaa < 1:489837/236‑1 (MQ=255) gcGTCCTGCCGATAGAAAAACCCGATCGCATCAGCGCCCATGTTGACGGCGTCCCGGTGCTGACCATTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACaaa < 2:375771/235‑1 (MQ=255) tCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATACGGCCGATGACAACAACGGCGCAATGGACGATCTTTGGGCTGAAGCGTTGAGTGAAGaaaaa > 2:114943/1‑235 (MQ=255) tCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGAAATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGAACTGTGGGCTGAACCGTTTAGCGAATcaaaa > 2:54782/1‑235 (MQ=255) aGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGCCAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACcagcag > 2:207928/1‑236 (MQ=255) cGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAgcgc < 1:114943/236‑1 (MQ=255) tcatcGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCgaga < 1:637823/236‑1 (MQ=255) catcGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGAc < 2:306580/236‑1 (MQ=255) tGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCa > 2:32644/1‑236 (MQ=255) gTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCTCCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCCCCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAg < 1:470481/236‑1 (MQ=255) agtATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGaa < 1:54782/236‑1 (MQ=255) tatgcgaCCCTAAACGGTCAGTATGCGTTACGGATAGAACCTTGGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCgg < 2:565054/226‑1 (MQ=255) tATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCgg < 1:17761/232‑1 (MQ=255) aTGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGt > 1:393402/1‑236 (MQ=255) cACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCa < 1:32644/236‑1 (MQ=255) cACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGCCGGGGGGGATGTCGACGGACCGtatc > 2:547699/1‑232 (MQ=255) tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAg > 2:225215/1‑147 (MQ=255) tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAg < 1:225215/147‑1 (MQ=255) tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGGGTTCCAGCAATTTGGCGGTGGGGATGTCAGCGGAAAGTTGCAGGag > 2:51055/1‑234 (MQ=255) tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGAAAAAGGGCTGCGGGGACGGGGTTCCAGCAATTTGCCGGCGGGGATGTTAGCGGACAATTGCAGGata > 2:693796/1‑236 (MQ=255) ggTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGAc < 2:366236/236‑1 (MQ=255) atatgacttAAGGACAGAACGTTTGAGTCACCCGATTGTAAATTCTCTGAACGGGGAACAGCCCAACGGAGTGACATGAATAATCCGGCCGATGACAACAAAGGCGCAATGGACGAGCTGTGGGCTGAAGCGTTGAGCGGACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGAcc < 2:93443/225‑1 (MQ=255) tATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACTAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:38620/235‑1 (MQ=255) tATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCAGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCt < 1:207928/232‑1 (MQ=255) aTGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAAc > 2:338595/1‑140 (MQ=255) aTGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAAc < 1:338595/140‑1 (MQ=255) cGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:693796/231‑1 (MQ=255) cGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTAt < 2:393402/234‑1 (MQ=255) caggATAGAACATTGGATCCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAAGCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGatat < 2:380155/234‑1 (MQ=255) aCGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGatat < 1:402943/236‑1 (MQ=255) ggATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTTGTGAGTGCAGCGGAACGTTGCAGGGAGTCGCACTGATAATGGac > 2:738500/1‑231 (MQ=255) aaCATTTGATTCACCCGATTTTAAATTCTCTGAACGAgg > 1:42637/1‑39 (MQ=255) aaCATTTGATTCACCCGATTTTAAATTCTCTGAACGAgg < 2:42637/39‑1 (MQ=255) ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt > 2:450784/1‑214 (MQ=255) ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:450784/214‑1 (MQ=255) ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGGGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTg > 2:519224/1‑236 (MQ=255) | GAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTG > NC_000913/2020818‑2021279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |