New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 683103 =183 (0.840)67 (0.310) 51/196 8.6 26.8% coding (291/1671 nt) hscC Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
?NC_000913 = 689045 NA (NA)noncoding (1/1195 nt) IS5 repeat region
Rejected: Coverage evenness skew score above cutoff.

CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/683201‑683103
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  NC_000913/689045‑688946
                                                                                                                                                                                                       
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     <  2:2508673/100‑1
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     <  1:663968/100‑1
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     <  2:607193/100‑1
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     <  1:4852844/100‑1
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     >  1:879447/1‑100
CCGGATAAAACGGCAGCGTGATTTAAACGTGCAATGTGCAGTAATACCAACTTGCGTTTAGGTAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG                                                                                                     <  2:2456901/100‑1
 CGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGG                                                                                                    >  1:2521518/1‑100
  GGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGA                                                                                                   >  2:1339044/1‑100
  GGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGA                                                                                                   >  2:2551456/1‑100
     TAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGG                                                                                                >  2:1143978/1‑100
     TAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGG                                                                                                <  1:3819618/100‑1
      AAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGT                                                                                               >  1:5418439/1‑100
         ACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCG                                                                                            <  1:1233440/100‑1
          CGGCAGCGTTATTTAAACGTGCAATGGGCAGTAAGACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGA                                                                                           <  2:3842070/100‑1
           GGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAA                                                                                          <  1:310563/100‑1
             CAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACA                                                                                        <  2:3590229/100‑1
               GCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAG                                                                                      >  1:4182247/1‑100
                CGTTATGTAAACGTGCAATGGGCAGTAATACCAACTTGCGGTTAGGCAGCGACACAGTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCTAACAAGg                                                                                     >  2:2491396/1‑99
                 GTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTC                                                                                    >  2:4625504/1‑100
                     TTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTG                                                                                <  2:62821/100‑1
                       TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT                                                                              >  2:389787/1‑100
                       TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT                                                                              >  1:1572435/1‑100
                       TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT                                                                              <  1:5471757/100‑1
                        AAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATA                                                                             <  2:4237285/100‑1
                        AAACGTGCAATGGGCAGGAATACCAACTGGCGGTTAGGCAGCGACACAGTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATA                                                                             <  1:200845/100‑1
                          ACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATG                                                                           <  1:2034920/100‑1
                           CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGCACTGTCCTCTTTGGGAAGGTGCGACCAAGTCCCTGATATGA                                                                          >  2:2833731/1‑100
                           CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGA                                                                          >  1:202907/1‑100
                           CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGA                                                                          >  2:4771304/1‑100
                             TGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGA                                                                        >  1:5495840/1‑100
                                 ATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT                                                                    <  1:4839681/100‑1
                                 ATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT                                                                    <  1:1718610/100‑1
                                   GGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT                                                                  >  2:5403588/1‑100
                                    GGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT                                                                 <  1:3765507/100‑1
                                    GGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT                                                                 >  1:4695497/1‑100
                                     gctGTAATACCGACTGGCGGTTAGGCAGCGACACATTTAACGGGTGAGAACTGTCCTCTTCAGGAAGGTGCGAACAAGTCCCTGATATGAGATCCCGTTT                                                                <  2:1680072/97‑1
                                      CAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG                                                               <  2:4830799/100‑1
                                      CAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG                                                               <  1:3247518/100‑1
                                       AGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT                                                              >  1:4778712/1‑100
                                          AATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAT                                                           >  2:2609839/1‑100
                                           ATACCAACTGGCGGTTAGGCAGCGACACATGTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGCTATGAGTTCATGTTTGTCATC                                                          >  2:3437633/1‑100
                                                    GGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT                                                 >  1:3243825/1‑100
                                                     GCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA                                                <  1:1159419/100‑1
                                                      CGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATgg                                               <  1:1249341/100‑3
                                                      CGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAG                                               >  1:2174752/1‑100
                                                       GGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA                                              >  1:1141096/1‑100
                                                       GGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATAGGAGATCATGTTTGTCATCTGGAGCCATAGA                                              >  2:3310656/1‑100
                                                            GGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG                                         >  2:1336187/1‑100
                                                             GCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG                                        <  1:3341754/100‑1
                                                              CAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT                                       <  2:2152089/100‑1
                                                                GCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTC                                     <  1:1417825/100‑1
                                                                  GACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCAT                                   >  1:3960780/1‑100
                                                                      CATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG                               >  2:1811580/1‑100
                                                                       ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA                              >  2:2745061/1‑100
                                                                       ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA                              >  2:2157847/1‑100
                                                                       ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA                              <  2:926427/100‑1
                                                                        TTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG                             <  2:1553063/100‑1
                                                                        TTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG                             <  2:3088384/100‑1
                                                                         TTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT                            <  2:1862186/100‑1
                                                                                GCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCCTCATGAGTAATCAAC                     >  2:1984343/1‑100
                                                                                  CAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT                   >  2:7492/1‑100
                                                                                     AACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC                <  2:2049211/100‑1
                                                                                     AACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC                <  1:631884/100‑1
                                                                                            CTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG         >  1:2308835/1‑100
                                                                                            CTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG         >  1:4258484/1‑100
                                                                                             TCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACATTCGCCGA        >  2:5010322/1‑100
                                                                                              CTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC       <  1:2006978/100‑1
                                                                                              CTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACCTACCTTCGCCGAC       <  2:4105448/100‑1
                                                                                                taGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAG     <  2:920718/98‑1
                                                                                                TTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAG     <  1:1622766/100‑1
                                                                                                TTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAG     <  2:1547755/100‑1
                                                                                                 TGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT    >  1:1233956/1‑100
                                                                                                  GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG   <  1:2287126/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGCCAGTGA  >  1:3012464/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:1588904/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:1570391/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:4916991/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:1445615/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  1:1879911/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:913964/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  2:4426345/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:3012962/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  1:2854844/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:1773949/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:705340/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:2383643/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:4914965/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:4913784/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  1:4828294/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:2633415/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  2:281833/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  2:3104854/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  1:3161243/100‑1
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:408967/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTGACCTTCGCCGACAGTGA  >  1:5122418/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATAATGAGTCATCAACTTACCTTCGCCGACAATGA  >  2:4521374/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTAGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  2:5373208/1‑100
                                                                                                   GGAAGGTGCGAACAAGTCCCTGATATGAGATCAGGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:3640251/1‑100
                                                                                                   GGAAGGAGCGAACAAGTCGCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  1:4648448/1‑100
                                                                                                                                                                                                       
CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/683201‑683103
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  <  NC_000913/689045‑688946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.