| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 683103 = | 183 (0.840) | 62 (0.290) | 30/194 | 15.1 | 25.5% | coding (291/1671 nt) | hscC | Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor |
| ? | NC_000913 | = 2067353 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/683202‑683103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA < NC_000913/2067353‑2067254 TCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTG < 1:4341650/100‑1TCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTG < 2:3229192/100‑1TCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTG > 2:1141883/1‑100 CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG < 2:607193/100‑1 CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG < 1:4852844/100‑1 CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG < 2:2508673/100‑1 CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG < 1:663968/100‑1 CCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG > 1:879447/1‑100 CCGGATAAAACGGCAGCGTGATTTAAACGTGCAATGTGCAGTAATACCAACTTGCGTTTAGGTAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGG < 2:2456901/100‑1 CGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGG > 1:2521518/1‑100 GGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGA > 2:1339044/1‑100 GGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGA > 2:2551456/1‑100 TAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGG > 2:1143978/1‑100 TAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGG < 1:3819618/100‑1 AAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGT > 1:5418439/1‑100 ACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCG < 1:1233440/100‑1 CGGCAGCGTTATTTAAACGTGCAATGGGCAGTAAGACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGA < 2:3842070/100‑1 GGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAA < 1:310563/100‑1 CAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACA < 2:3590229/100‑1 GCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAG > 1:4182247/1‑100 CGTTATGTAAACGTGCAATGGGCAGTAATACCAACTTGCGGTTAGGCAGCGACACAGTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCTAACAAGg > 2:2491396/1‑99 GTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTC > 2:4625504/1‑100 TTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTG < 2:62821/100‑1 TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT > 1:1572435/1‑100 TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT > 2:389787/1‑100 TAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGAT < 1:5471757/100‑1 AAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATA < 2:4237285/100‑1 AAACGTGCAATGGGCAGGAATACCAACTGGCGGTTAGGCAGCGACACAGTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATA < 1:200845/100‑1 ACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATG < 1:2034920/100‑1 CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGCACTGTCCTCTTTGGGAAGGTGCGACCAAGTCCCTGATATGA > 2:2833731/1‑100 CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGA > 2:4771304/1‑100 CGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGA > 1:202907/1‑100 TGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGA > 1:5495840/1‑100 ATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT < 1:4839681/100‑1 ATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT < 1:1718610/100‑1 GGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT > 2:5403588/1‑100 GGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 1:3765507/100‑1 GGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT > 1:4695497/1‑100 gctGTAATACCGACTGGCGGTTAGGCAGCGACACATTTAACGGGTGAGAACTGTCCTCTTCAGGAAGGTGCGAACAAGTCCCTGATATGAGATCCCGTTT < 2:1680072/97‑1 CAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG < 2:4830799/100‑1 CAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG < 1:3247518/100‑1 AGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 1:4778712/1‑100 AATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAT > 2:2609839/1‑100 ATACCAACTGGCGGTTAGGCAGCGACACATGTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGCTATGAGTTCATGTTTGTCATC > 2:3437633/1‑100 GGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT > 1:3243825/1‑100 GCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATa < 1:1159419/100‑2 CGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATag > 1:2174752/1‑98 CGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGG < 1:1249341/100‑1 GGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATaga > 1:1141096/1‑97 GGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATAGGAGATCATGTTTGTCATCTGGAGCCATaga > 2:3310656/1‑97 GGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG > 2:1336187/1‑100 GCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:3341754/100‑1 CAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 2:2152089/100‑1 GCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTC < 1:1417825/100‑1 GACACATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCAT > 1:3960780/1‑100 CATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG > 2:1811580/1‑100 ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA < 2:926427/100‑1 ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA > 2:2745061/1‑100 ATTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA > 2:2157847/1‑100 TTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG < 2:3088384/100‑1 TTTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG < 2:1553063/100‑1 TTAACGCGCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT < 2:1862186/100‑1 GCCAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCCTCATGAGTAATCAAC > 2:1984343/1‑100 CAGAACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT > 2:7492/1‑100 AACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC < 2:2049211/100‑1 AACTGTCCTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC < 1:631884/100‑1 CTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:2308835/1‑100 CTCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:4258484/1‑100 TCTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACATTCGCCGA > 2:5010322/1‑100 CTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC < 1:2006978/100‑1 CTTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACCTACCTTCGCCGAC < 2:4105448/100‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG < 2:4554145/100‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG < 1:1230706/100‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG > 1:5152243/1‑100 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG < 2:1867696/100‑1 GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA < 2:3928115/100‑1 GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > 1:2580039/1‑100 GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > 2:1513229/1‑100 GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > 2:3469326/1‑100 GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGACCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCCGCGCCGACAGTca > 2:5467362/1‑98 TCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/683202‑683103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA < NC_000913/2067353‑2067254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |