Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,445,1900AC41.1% 177.8 / 278.9 236F124C (TTC→TGC) yfcATauE/TSUP family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (72/67);  new base C (47/50);  total (119/117)
Fisher's exact test for biased strand distribution p-value = 6.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 238 total aligned reads displayed.

CATCATAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCGACA  >  NC_000913/2445092‑2445288
                                                                                                  |                                                                                                  
catcatAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGaa                                                                                                   >  1:3116913/1‑100 (MQ=255)
  tcatAAAAACCGACGCAGCCACCGGCTATTAACGCGAATGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAAt                                                                                                 <  1:3846903/100‑1 (MQ=255)
   catAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATa                                                                                                >  2:2904675/1‑100 (MQ=255)
     tAAAAACCGACGCAGCCACCGGCTATTAACGCGAATGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATaga                                                                                              >  1:418675/1‑100 (MQ=255)
     tAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATaga                                                                                              <  2:2463787/100‑1 (MQ=255)
     tAAAAACAGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATaga                                                                                              >  1:4890947/1‑100 (MQ=255)
      aaaaaCCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATTCGGCGCTGACGGGCTGCTTCCCCTGGCTTACGCATCAGCAAGAAATagag                                                                                             <  2:2154543/100‑1 (MQ=255)
           ccGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGa                                                                                        <  2:401549/100‑1 (MQ=255)
            cGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGAt                                                                                       <  1:526091/100‑1 (MQ=255)
             gACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATa                                                                                      >  1:3272240/1‑100 (MQ=255)
             gACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCGTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGAtn                                                                                      <  2:4493452/100‑2 (MQ=255)
                  aGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAAt                                                                                 <  2:491270/100‑1 (MQ=255)
                    ccACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTa                                                                               <  2:1421200/100‑1 (MQ=255)
                      aacGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTAcc                                                                             <  1:3057715/98‑1 (MQ=255)
                            tATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATg                                                                       >  2:1597521/1‑100 (MQ=255)
                            tATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATg                                                                       <  2:4348672/100‑1 (MQ=255)
                             aTTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTGGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATgg                                                                      >  1:185872/1‑100 (MQ=255)
                              ttAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATggg                                                                     >  2:3555910/1‑100 (MQ=255)
                              ttAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATggg                                                                     <  1:4335997/100‑1 (MQ=255)
                              atAAAGCGAAGGGTAACCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATggn                                                                     <  1:4455324/99‑2 (MQ=255)
                                aaCGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCa                                                                   >  2:195939/1‑100 (MQ=255)
                                   gcgAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCaaaa                                                                >  1:5465801/1‑100 (MQ=255)
                                      aaGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTTACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCt                                                             >  2:5427505/1‑100 (MQ=255)
                                       aGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATACAGGCCGATACAAATTACCAGAATGGCCAGAACCTg                                                            >  2:2859180/1‑100 (MQ=255)
                                         ggTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGcc                                                          <  1:3589073/100‑1 (MQ=255)
                                         ggTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGcc                                                          <  2:1049707/100‑1 (MQ=255)
                                         ggTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGcc                                                          <  2:3284398/100‑1 (MQ=255)
                                         ggTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGcc                                                          >  2:3789195/1‑100 (MQ=255)
                                          gTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCg                                                         <  2:339005/100‑1 (MQ=255)
                                          gTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGCGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCg                                                         <  2:144727/100‑1 (MQ=255)
                                          gTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCg                                                         >  1:2360066/1‑100 (MQ=255)
                                          gTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCg                                                         >  2:2628417/1‑100 (MQ=255)
                                             aaCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCTGAATGGGCAAAATCTGCCGTaa                                                      >  2:4095502/1‑100 (MQ=255)
                                             aaCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTaa                                                      >  1:668296/1‑100 (MQ=255)
                                              aCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAg                                                     <  2:417650/100‑1 (MQ=255)
                                              aCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAg                                                     >  2:110598/1‑100 (MQ=255)
                                              aCCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAg                                                     <  1:852684/100‑1 (MQ=255)
                                               ccGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGa                                                    >  2:686551/1‑100 (MQ=255)
                                                cGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGAc                                                   >  1:112149/1‑100 (MQ=255)
                                                 gTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACACATTACCAGAATGGGCAAAATCTGCCGTAAGACa                                                  <  2:4554298/100‑1 (MQ=255)
                                                 gTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACa                                                  <  2:3055514/100‑1 (MQ=255)
                                                  tACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACAt                                                 <  1:2010135/100‑1 (MQ=255)
                                                   aCATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATc                                                <  2:1607568/100‑1 (MQ=255)
                                                    cATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCa                                               >  2:2379710/1‑100 (MQ=255)
                                                      tCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGc                                             >  1:1017999/1‑100 (MQ=255)
                                                      tCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGc                                             >  2:1718174/1‑100 (MQ=255)
                                                       ccGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAGATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGcc                                            <  1:4866839/100‑1 (MQ=255)
                                                       ccGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGcc                                            <  2:4523421/100‑1 (MQ=255)
                                                       ccGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGcc                                            <  1:910479/100‑1 (MQ=255)
                                                       ccGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGcc                                            <  1:346334/100‑1 (MQ=255)
                                                           cgcTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGaa                                        <  1:1294398/100‑1 (MQ=255)
                                                             cTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACg                                      <  1:2150161/100‑1 (MQ=255)
                                                                 cGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTAtt                                  >  2:1217805/1‑100 (MQ=255)
                                                                 cGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTAtt                                  <  1:4109855/100‑1 (MQ=255)
                                                                 cGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTAtt                                  <  1:2889334/100‑1 (MQ=255)
                                                                 cGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTAtt                                  <  2:1886915/100‑1 (MQ=255)
                                                                   gTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGc                                <  1:2654212/100‑1 (MQ=255)
                                                                     cttcttCACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCAc                              >  1:1942983/1‑100 (MQ=255)
                                                                      ttcttcACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCAcc                             <  1:3989457/100‑1 (MQ=255)
                                                                       tcttcACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACca                            >  1:723608/1‑100 (MQ=255)
                                                                        cttcACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcag                           <  1:609669/100‑1 (MQ=255)
                                                                         ttcACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcagc                          <  2:938830/100‑1 (MQ=255)
                                                                         ttcACCTAGCTTTGGCATCAGCAAGAAATAGAGACCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcagc                          >  1:3554279/1‑100 (MQ=255)
                                                                           cACCTAGCTTTGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcagcag                        <  2:857883/100‑1 (MQ=255)
                                                                           cACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcagcag                        >  1:4761297/1‑100 (MQ=255)
                                                                           cACCTAGCTGTGGCATCAGGAAGCAATAGAGGCCGATACAAATTACCATAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACcagcag                        <  2:350549/100‑1 (MQ=255)
                                                                             ccTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTg                      >  2:30241/1‑100 (MQ=255)
                                                                                 gCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgcc                  >  1:5124049/1‑100 (MQ=255)
                                                                                 gCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgcc                  <  1:4510699/100‑1 (MQ=255)
                                                                                  cTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgccg                 <  1:2811921/100‑1 (MQ=255)
                                                                                  cTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgccg                 >  1:5515402/1‑100 (MQ=255)
                                                                                  cTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgccg                 >  2:2056567/1‑100 (MQ=255)
                                                                                  cTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACATATTGCACCAGCAGTGcgccg                 <  1:5006894/100‑1 (MQ=255)
                                                                                   tttGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGcgccgc                >  2:4810509/1‑100 (MQ=255)
                                                                                    ttGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCt               <  2:3129500/100‑1 (MQ=255)
                                                                                    ttGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCt               >  1:1374478/1‑100 (MQ=255)
                                                                                     tGGCATCAGGAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTc              <  2:2070927/100‑1 (MQ=255)
                                                                                     tGGCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTc              <  2:230871/100‑1 (MQ=255)
                                                                                      ggCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCa             >  1:1437218/1‑100 (MQ=255)
                                                                                      ggCATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCa             >  2:2517058/1‑100 (MQ=255)
                                                                                      ggCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCa             >  2:2360306/1‑100 (MQ=255)
                                                                                        cATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCAtt           >  2:1282641/1‑100 (MQ=255)
                                                                                        cATCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCAtt           >  2:2277369/1‑100 (MQ=255)
                                                                                        cATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCAtt           >  1:599686/1‑100 (MQ=255)
                                                                                        cATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCAtt           >  2:1331608/1‑100 (MQ=255)
                                                                                        cATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCAtt           >  1:2536299/1‑100 (MQ=255)
                                                                                          tCAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGa         <  1:3076087/100‑1 (MQ=255)
                                                                                           cAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAg        <  2:5465695/100‑1 (MQ=255)
                                                                                           cAGCAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAg        <  2:414550/100‑1 (MQ=255)
                                                                                           cAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAg        <  1:1253655/100‑1 (MQ=255)
                                                                                           cAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAg        <  2:2682462/100‑1 (MQ=255)
                                                                                            aGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGc       >  2:5211138/1‑100 (MQ=255)
                                                                                            aGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGc       <  1:3404161/100‑1 (MQ=255)
                                                                                             gCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGcc      <  1:4658515/100‑1 (MQ=255)
                                                                                              cAAGCAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCCGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCg     <  2:3912707/100‑1 (MQ=255)
                                                                                              cAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCg     >  1:1671549/1‑100 (MQ=255)
                                                                                               aaGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCGa    >  2:4966392/1‑100 (MQ=255)
                                                                                                aGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCgtc   <  2:5094754/100‑3 (MQ=255)
                                                                                                aGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCGAc   <  2:2965010/100‑1 (MQ=255)
                                                                                                 gAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCGACa  >  2:4395673/1‑100 (MQ=255)
                                                                                                  |                                                                                                  
CATCATAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAACCGTACATCCGGCGCTGGCGGTCTTCTTCACCTAGCTTTGGCATCAGCAAGAAATAGAGGCCGATACAAATTACCAGAATGGGCAAAATCTGCCGTAAGACATCAGCCTGAACGTATTGCACCAGCAGTGCGCCGCTCATTGAGCCGACA  >  NC_000913/2445092‑2445288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑