BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,142,253	A→C	intergenic (‑38/+54)	dcd ← / ← udk	deoxycytidine triphosphate deaminase; dCTP deaminase/uridine/cytidine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,142,253	0	A	C	100.0%	707.6 / NA	198	intergenic (‑38/+54)	dcd/udk	deoxycytidine triphosphate deaminase; dCTP deaminase/uridine/cytidine kinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (108/90); total (108/90)

Only 100 of 198 total aligned reads displayed.

GTTGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCAATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATATCGATC  >  NC_000913/2142156‑2142349

gTTGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCAt                                                                                                <  2:3198292/100‑1 (MQ=255)

gTTGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCAt                                                                                                <  2:2001481/100‑1 (MQ=255)

  tGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTa                                                                                              >  1:5241606/1‑100 (MQ=255)

  tGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTa                                                                                              <  1:960575/100‑1 (MQ=255)

  tGATCGACAAACGGCCCTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTa                                                                                              <  2:4601029/100‑1 (MQ=255)

   naTCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTAc                                                                                             >  1:2602719/2‑100 (MQ=255)

    aTCGACAAACGGCCTTCATCAAGCCAGGCTTCAGTATCTCGGTCACACAGACGCATGGCATTTACTCCTTTCGCGCATCACTCCCTTAACGCCCATTACg                                                                                            >  1:5251031/1‑100 (MQ=255)

      cGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTc                                                                                          >  1:4518351/1‑100 (MQ=255)

      cGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTc                                                                                          >  1:4099852/1‑100 (MQ=255)

      cGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTc                                                                                          >  1:150528/1‑100 (MQ=255)

       gACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCa                                                                                         >  1:4777306/1‑100 (MQ=255)

        aCAAATGGCTTTGTTCAAGCCAGGCTTCAATATCACGGTCACACAGACGCATGGCATTGCTTCCTGGCGCGCATCACCGCCTTAAAGCCCAGTACGTaaa                                                                                        <  2:3973980/100‑1 (MQ=255)

         cAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAg                                                                                       <  2:5341018/100‑1 (MQ=255)

         cAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAg                                                                                       <  2:2049417/100‑1 (MQ=255)

           naCGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAggg                                                                                     >  1:4456246/2‑100 (MQ=255)

           aaCGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAggg                                                                                     <  1:2776810/100‑1 (MQ=255)

             cGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCa                                                                                   <  1:2163647/100‑1 (MQ=255)

             cGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCa                                                                                   <  1:2878086/100‑1 (MQ=255)

              ggCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCAt                                                                                  >  1:5207908/1‑100 (MQ=255)

               gCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATa                                                                                 >  2:5434664/1‑100 (MQ=255)

               gCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATa                                                                                 >  2:1960099/1‑100 (MQ=255)

                 cTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACt                                                                               >  1:4309625/1‑100 (MQ=255)

                 cTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACt                                                                               >  1:3016127/1‑100 (MQ=255)

                   tcatcaATCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCGTTCGCGCATCACTCCCTTAACGCCCATTACGTCATGGGCATACTAg                                                                             <  2:5107710/100‑1 (MQ=255)

                   tcatcaAGCCAGGCTTCAATATCTCGGTCACCCAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAg                                                                             >  1:2548003/1‑100 (MQ=255)

                    catcaAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAgg                                                                            <  2:61887/100‑1 (MQ=255)

                     atcaAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGt                                                                           <  1:325378/100‑1 (MQ=255)

                     atcaAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGt                                                                           <  2:1330361/100‑1 (MQ=255)

                          gCCAGGCTTCAATATCTCGGTCACACTGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCa                                                                      <  1:4577563/100‑1 (MQ=255)

                           ccAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCAc                                                                     <  1:671123/100‑1 (MQ=255)

                           ccAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCAc                                                                     <  1:1835792/100‑1 (MQ=255)

                            cAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACt                                                                    >  2:624767/1‑100 (MQ=255)

                              ggCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGa                                                                  >  2:1604634/1‑100 (MQ=255)

                                cTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAAc                                                                <  2:1747601/100‑1 (MQ=255)

                                cTTCAATATCTCGGTCACACAGACGCATGGCATTATCTCCATTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAAc                                                                <  2:5258058/100‑1 (MQ=255)

                                 ttCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACg                                                               >  1:1956781/1‑100 (MQ=255)

                                    aaTATCTCGGGCACACAGACTCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTa                                                            <  2:4413672/100‑1 (MQ=255)

                                     atatCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTac                                                           >  1:3914338/1‑100 (MQ=255)

                                     atatCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTac                                                           <  2:1935384/100‑1 (MQ=255)

                                     atatCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTac                                                           <  2:4770917/100‑1 (MQ=255)

                                      tatCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTaca                                                          >  2:1822696/1‑100 (MQ=255)

                                       atCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTacac                                                         <  2:4440235/100‑1 (MQ=255)

                                       atCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTacac                                                         >  2:2277718/1‑100 (MQ=255)

                                       atCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTacac                                                         >  1:5480953/1‑100 (MQ=255)

                                       atCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTacac                                                         >  1:1582332/1‑100 (MQ=255)

                                        tctcGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTAcaca                                                        >  2:855211/1‑100 (MQ=255)

                                          tcGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAAt                                                      <  2:2522909/100‑1 (MQ=255)

                                            ggTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAAttt                                                    <  2:1283741/100‑1 (MQ=255)

                                             gTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTa                                                   <  1:1113929/100‑1 (MQ=255)

                                                acacaGCCGCATGGCATTTTCTCCTTTCGCCCATCACTCCCTTAAGGCCCCTTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAAGTTATCa                                                <  2:5179433/100‑1 (MQ=255)

                                                 cacaGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCaa                                               <  2:4495460/100‑1 (MQ=255)

                                                 cacaGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCaa                                               <  1:3574954/100‑1 (MQ=255)

                                                 cacaGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCaa                                               >  1:3857958/1‑100 (MQ=255)

                                                  acaGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAg                                              >  2:2690976/1‑100 (MQ=255)

                                                    aGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCt                                            <  1:3103340/100‑1 (MQ=255)

                                                    aGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCt                                            <  1:4881704/100‑1 (MQ=255)

                                                     gACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCtt                                           >  2:1834997/1‑100 (MQ=255)

                                                       cGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTAt                                         >  2:3101497/1‑100 (MQ=255)

                                                       cGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTAt                                         >  1:4932775/1‑100 (MQ=255)

                                                         cATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTc                                       >  1:743337/1‑100 (MQ=255)

                                                         cATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTc                                       <  1:1699145/100‑1 (MQ=255)

                                                          aTGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCa                                      >  1:4176130/1‑100 (MQ=255)

                                                            ggCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCaaa                                    >  1:3407285/1‑100 (MQ=255)

                                                              cATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCGAGCTTATTCAAAGa                                  >  2:5020266/1‑100 (MQ=255)

                                                              cATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGa                                  >  1:3376546/1‑100 (MQ=255)

                                                              cATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCACTACGTCAAGGTCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGa                                  <  2:4987131/100‑1 (MQ=255)

                                                               aTTTTCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGaa                                 >  1:5401730/1‑100 (MQ=255)

                                                                 tttCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACt                               <  1:3584297/100‑1 (MQ=255)

                                                                 tttCTCCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACt                               <  2:3655183/100‑1 (MQ=255)

                                                                   tctcCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGa                             <  2:147931/100‑1 (MQ=255)

                                                                   tctcCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGa                             <  1:4225417/100‑1 (MQ=255)

                                                                    ctcCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGAc                            <  2:2731967/100‑1 (MQ=255)

                                                                    ctcCTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGAc                            <  2:2920182/100‑1 (MQ=255)

                                                                       cTTTCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTa                         >  2:1455468/1‑100 (MQ=255)

                                                                        tttCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTAt                        >  2:3454004/1‑100 (MQ=255)

                                                                         ttCGCGCATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTAtt                       <  1:5347131/100‑1 (MQ=255)

                                                                             cgcATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCg                   <  1:2263446/100‑1 (MQ=255)

                                                                               cATCTCTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCt                 <  2:4342257/100‑1 (MQ=255)

                                                                               cATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCt                 <  1:2406865/100‑1 (MQ=255)

                                                                               cATCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCt                 >  1:5543929/1‑100 (MQ=255)

                                                                                aTCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCtt                >  1:1385701/1‑100 (MQ=255)

                                                                                aTCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCtt                >  1:3669624/1‑100 (MQ=255)

                                                                                 tCACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCttt               >  2:4255931/1‑100 (MQ=255)

                                                                                  cACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTc              >  2:111053/1‑100 (MQ=255)

                                                                                  cACTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTc              >  2:5423869/1‑100 (MQ=255)

                                                                                  cACTCCCCTAACGCCCATTACGTCAACGGCATACTAGGTTATCACTGAACGGTACACACCTTACCCAACTTATTCCAAGCACTGACTTATTTTCGCCTTc              >  2:1016758/1‑100 (MQ=255)

                                                                                   aCTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCa             >  2:3724183/1‑100 (MQ=255)

                                                                                    cTCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCaa            <  1:2466096/100‑1 (MQ=255)

                                                                                     tCCCTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAat           <  1:2086362/100‑1 (MQ=255)

                                                                                      cccTTAACGCCCATTACGTCAAGGGCATACTCGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGATTTCAata          <  1:4724748/100‑1 (MQ=255)

                                                                                      cccTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAata          >  1:749231/1‑100 (MQ=255)

                                                                                       ccTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAatat         >  1:1131735/1‑100 (MQ=255)

                                                                                        cTTAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAatata        <  1:3044476/100‑1 (MQ=255)

                                                                                          tAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTGTTCAAAGAACTGACTTATTTTCGCTTTCAATATatc      <  2:5162228/100‑1 (MQ=255)

                                                                                          tAACGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATatc      >  2:4073135/1‑100 (MQ=255)

                                                                                           ctcGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATatcg     <  2:3088611/98‑1 (MQ=255)

                                                                                           aaCGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTGTCAAGCTTATTCAAAGAACTCACTTATTTTCGCTTTCAATATatct     >  1:5167769/1‑99 (MQ=255)

                                                                                             cGCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTCTTCAAAGAACTGACTTATTTTCGCTTTCAATATatcgag   >  1:3117769/1‑99 (MQ=255)

                                                                                              gCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATatcgatc  >  1:3168998/1‑100 (MQ=255)

                                                                                              gCCCATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATatcgatc  >  2:2468971/1‑100 (MQ=255)

GTTGATCGACAAACGGCCTTCATCAAGCCAGGCTTCAATATCTCGGTCACACAGACGCATGGCATTTTCTCCTTTCGCGCATCACTCCCTTAACGCCAATTACGTCAAGGGCATACTAGGTTATCACTGAACGGTACACAATTTATCAAGCTTATTCAAAGAACTGACTTATTTTCGCTTTCAATATATCGATC  >  NC_000913/2142156‑2142349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`