| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,155,954 | G→A | G231D (GGC→GAC) | mdtB → | multidrug efflux system, subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,155,954 | 0 | G | A | 98.6% | 725.8 / ‑3.3 | 219 | G231D (GGC→GAC) | mdtB | multidrug efflux system, subunit B |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (107/106); total (109/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
AACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAA > NC_000913/2155857‑2156049 | aaCGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGAcc < 1:2199546/100‑1 (MQ=255)aaCGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGAcc < 1:5491771/100‑1 (MQ=255) aCGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGAccc > 2:1763423/1‑100 (MQ=255) tCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTcc < 2:3079861/100‑1 (MQ=255) tCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTcc < 2:4670836/100‑1 (MQ=255) ggCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGt > 1:3151395/1‑100 (MQ=255) gCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTg < 2:4989693/100‑1 (MQ=255) gCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTg < 1:2931898/100‑1 (MQ=255) cGATTGCCGCCCTCGGCCTGACCAGCGAAAGCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGc < 1:5304992/100‑1 (MQ=255) cGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGc < 2:3691746/100‑1 (MQ=255) aTTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCgg < 1:2434103/100‑1 (MQ=255) gccgccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCa > 1:3735711/1‑100 (MQ=255) gccgccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCa > 1:1331419/1‑100 (MQ=255) ccgccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAACAGGTAGCCTCGACGACCCTTCCCGTGCGGTCAc > 1:2722425/1‑100 (MQ=255) cgccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACg > 2:4241927/1‑100 (MQ=255) cgccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACg < 2:3271498/100‑1 (MQ=255) gccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGc < 1:259895/100‑1 (MQ=255) gccCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGc < 1:116497/100‑1 (MQ=255) cccTCGTCCTCACCAGCGAACCCGTGCTCACCGCCATTACCGGCGCCAACGTTAACTCGGAAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCt > 2:4919519/1‑100 (MQ=255) tCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTc < 1:1123263/100‑1 (MQ=255) ccTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCcgcg < 1:287201/100‑1 (MQ=255) ccTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCcgcg < 1:663043/100‑1 (MQ=255) cTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGa > 1:2131469/1‑100 (MQ=255) tGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGaa > 2:3991591/1‑100 (MQ=255) gACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAAc < 2:4363544/100‑1 (MQ=255) gACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAAc > 1:4969862/1‑100 (MQ=255) aCCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACg > 1:2757942/1‑100 (MQ=255) aCCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACg < 1:2833050/100‑1 (MQ=255) aCCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACg < 1:3583480/100‑1 (MQ=255) ccAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGa > 1:5076469/1‑100 (MQ=255) ccAGCGAAACCGTGCCCACCGCCATTACCGACGCTAACGTTAACTAGGCAAAAGGTAGCCTCGACGACCCTTCCCGAGCGGTCACGCTTTACGCGAACGa > 1:4843259/1‑100 (MQ=255) cAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAc < 2:388984/100‑1 (MQ=255) cAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAc < 2:117720/100‑1 (MQ=255) tgCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGCCGACCCTTCAAGAGCGGTCCCGCTTTCCGCGCACGAcc > 2:105026/2‑100 (MQ=255) aGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAcc > 2:5424183/1‑100 (MQ=255) aGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAcc < 1:3967473/100‑1 (MQ=255) aGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGAcc < 1:5051357/100‑1 (MQ=255) gCGAAGCCGTGCGCACCGCCAGTACCGGCGCTGACTTTAACTGGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCa < 2:1153753/100‑1 (MQ=255) gAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGa > 1:766540/1‑100 (MQ=255) gAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGa < 2:48570/100‑1 (MQ=255) aaaCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGAt < 1:5257599/100‑1 (MQ=255) aaCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATg < 2:1567569/100‑1 (MQ=255) aCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGc > 1:2280599/1‑100 (MQ=255) aCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGc < 2:1984887/100‑1 (MQ=255) aCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGc > 2:1242350/1‑100 (MQ=255) aCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCGTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGc < 2:2913212/100‑1 (MQ=255) aCCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGAAGCCTCGACAACCCTTCCCGTGCGGTCACGCTTGCCGCGAACGACCAGATGc < 1:1896984/100‑1 (MQ=255) ccGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCa < 2:107047/100‑1 (MQ=255) cGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCaa > 2:5352134/1‑100 (MQ=255) gTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAAt > 1:3297706/1‑100 (MQ=255) gcACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATccgc > 1:4377437/1‑100 (MQ=255) cACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATccgcc < 2:2731571/100‑1 (MQ=255) aCCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATccgccg < 2:660021/100‑1 (MQ=255) gCCATTACCGGCGCTTACGTTAACTCCGCAAAATGTAGCCTTGATGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCTCCGAag < 2:5239141/100‑1 (MQ=255) gCCATTACCGGCGCTAACGTTAACTCGGCAAAGGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAag > 2:4519232/1‑100 (MQ=255) gCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAag < 2:1367598/100‑1 (MQ=255) ccATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAaga > 1:2532235/1‑100 (MQ=255) cATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAagag < 2:756652/100‑1 (MQ=255) cATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAagag > 2:3448349/1‑100 (MQ=255) aTTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGt > 1:560922/1‑100 (MQ=255) aTTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGt > 1:2637805/1‑100 (MQ=255) aTTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGt > 2:5080582/1‑100 (MQ=255) aTTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGt > 2:4025937/1‑100 (MQ=255) tACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTAt < 2:3900629/100‑1 (MQ=255) tACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTAt > 2:3501434/1‑100 (MQ=255) aCCGGCGCTAACGTTAACGCGGCAAAAGGTAGCCTCGTGGTCCCTTCCCGTGCTGTCACGCTTTCCGCGAACGAGTAGATGCAATCCGCCGAAGTGTATc < 2:1905031/100‑1 (MQ=255) ccGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCg > 2:63033/1‑100 (MQ=255) ccGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCg < 2:3603330/100‑1 (MQ=255) cGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGc > 2:1864571/1‑100 (MQ=255) ggCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGcc > 2:1406485/1‑100 (MQ=255) gcTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGc > 2:4115253/1‑100 (MQ=255) gcTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGc < 2:4292626/100‑1 (MQ=255) gcTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGc > 2:4162501/1‑100 (MQ=255) cTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCt > 1:1060658/1‑100 (MQ=255) cTAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCGTTCCGCGAACGACCAGATGGAATCCGCCGAAGAGTATCGCCAGCt < 2:3813726/100‑1 (MQ=255) tAACGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTa > 1:2985236/1‑100 (MQ=255) aCGTTAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAat > 2:3666971/1‑100 (MQ=255) cGTTAACTCGGCAAAAGGCAGCGTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAatc > 1:4651707/1‑100 (MQ=255) ttAACTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAatcat > 2:2272854/1‑100 (MQ=255) aCTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGc > 1:3921926/1‑100 (MQ=255) cTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGcc < 1:3385663/100‑1 (MQ=255) cTCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGcc < 1:4502337/100‑1 (MQ=255) tCGGCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCt > 1:2403870/1‑100 (MQ=255) gCAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTAcc < 1:1259073/100‑1 (MQ=255) cAAAAGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCa < 1:1762616/100‑1 (MQ=255) aaaGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGa > 2:1615119/1‑100 (MQ=255) aaaGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGa < 1:5497612/100‑1 (MQ=255) aGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGaan < 1:4434968/100‑2 (MQ=255) aGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAAc < 2:3178249/100‑1 (MQ=255) aGGTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAAc > 2:1948025/1‑100 (MQ=255) gTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACgg > 1:3773280/1‑100 (MQ=255) gTAGCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACgg < 1:1447787/100‑1 (MQ=255) gCCTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgc > 2:2592255/1‑100 (MQ=255) ccTCGACGAGCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcg < 1:147694/100‑1 (MQ=255) ccTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcg > 1:1626139/1‑100 (MQ=255) cTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcgc > 1:4175174/1‑100 (MQ=255) cTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcgc > 1:3843615/1‑100 (MQ=255) cTCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGgcgcgc > 2:2713919/1‑100 (MQ=255) tCGACGCCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGcc < 2:900476/100‑1 (MQ=255) tCGACGACCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGcc < 1:2664901/100‑1 (MQ=255) | AACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAA > NC_000913/2155857‑2156049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |