| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,082,025 | A→C | Y38S (TAC→TCC) | loiP → | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,082,025 | 0 | A | C | 94.7% | 688.0 / 14.9 | 209 | Y38S (TAC→TCC) | loiP | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein |
| Reads supporting (aligned to +/- strand): ref base A (4/7); new base C (109/88); total (114/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
TATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGC > NC_000913/3081929‑3082121 | tATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAg > 1:2062101/1‑100 (MQ=255) ttGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGtt < 2:3618110/100‑1 (MQ=255) ggTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTg < 2:3891609/100‑1 (MQ=255) aGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGt > 1:1789146/1‑100 (MQ=255) gCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTg > 2:1270629/1‑100 (MQ=255) cAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCAACAGCAGCGCAAGCTTTTCAGGCTTCCAGTTTAAGtta > 2:4409629/1‑98 (MQ=255) aTGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATg > 1:4266498/1‑100 (MQ=255) tGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATgc > 2:2222607/1‑100 (MQ=255) tGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATgc < 2:2689930/100‑1 (MQ=255) cGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAg > 1:3910980/1‑100 (MQ=255) cGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAg > 2:4836151/1‑100 (MQ=255) gTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAgg < 1:5291539/100‑1 (MQ=255) gTGGAAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCCGGCTTCCAGTTTGAGTCCTGCGCAgg > 2:4668380/1‑100 (MQ=255) tGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGt < 1:4784019/100‑1 (MQ=255) tGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGt > 1:4868954/1‑100 (MQ=255) gCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGa > 2:4965087/1‑100 (MQ=255) cAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGaa > 2:3747809/1‑100 (MQ=255) gTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAAccc > 2:3321698/1‑100 (MQ=255) gTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAAccc < 1:1687510/100‑1 (MQ=255) gTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAAccc < 2:3289241/100‑1 (MQ=255) tACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGCAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCt < 2:5112375/100‑1 (MQ=255) actgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTg < 1:3001795/100‑1 (MQ=255) ctgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGa > 1:555653/1‑100 (MQ=255) ctgactgGTTGCCAGAACATGGACTCCAACGGACTGCTCCCCTCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGa > 2:2207418/1‑100 (MQ=255) tgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAg > 1:2766270/1‑100 (MQ=255) tgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAg > 2:3574713/1‑100 (MQ=255) tgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAg < 1:3164538/100‑1 (MQ=255) tgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAg < 1:1242142/100‑1 (MQ=255) tgactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAg < 2:5380175/100‑1 (MQ=255) gactgGTTGCCAGAATATGGACTCCAACGTACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGc < 1:5092121/100‑1 (MQ=255) gactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGc < 1:5505722/100‑1 (MQ=255) gactgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGc < 1:2450839/100‑1 (MQ=255) taccgTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCg < 2:4315474/96‑1 (MQ=255) tgGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGAt > 2:289880/1‑100 (MQ=255) ggTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATc < 1:2296181/100‑1 (MQ=255) gTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCa < 1:3700043/100‑1 (MQ=255) gTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCa < 2:1168836/100‑1 (MQ=255) tGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAgg < 1:5541457/100‑1 (MQ=255) gAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGt > 1:1609860/1‑100 (MQ=255) aaTATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTc < 2:1768761/100‑1 (MQ=255) atatGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCa < 1:4220173/100‑1 (MQ=255) tatGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCATGCATGTCAg < 1:5150930/100‑1 (MQ=255) atGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAgg > 1:4703686/1‑100 (MQ=255) atGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAgg < 2:4246781/100‑1 (MQ=255) tGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGga < 1:999809/100‑1 (MQ=255) tGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGga < 2:2823851/100‑1 (MQ=255) ggACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGgag > 2:3353424/1‑100 (MQ=255) ggACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGgag < 2:2106675/100‑1 (MQ=255) cTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATg > 1:3583751/1‑100 (MQ=255) cTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATg < 1:460640/100‑1 (MQ=255) cTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTATTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATg > 1:3954761/1‑100 (MQ=255) tCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGCGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATgg > 2:756588/1‑100 (MQ=255) tCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATgg > 2:3538075/1‑100 (MQ=255) aaCGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACa < 1:633674/100‑1 (MQ=255) aCGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAg > 1:2455989/1‑100 (MQ=255) cGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGc < 1:5437795/100‑1 (MQ=255) ggACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCa > 1:212209/1‑100 (MQ=255) gACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCaa > 1:857030/1‑100 (MQ=255) gACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCaa > 1:3541316/1‑100 (MQ=255) cTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAgg > 1:922108/1‑100 (MQ=255) cTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAgg > 2:3428226/1‑100 (MQ=255) cTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAgg > 1:4553489/1‑100 (MQ=255) tGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGc > 1:1946171/1‑100 (MQ=255) tGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGc < 1:4362016/100‑1 (MQ=255) nctctCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcg > 1:4455872/2‑100 (MQ=255) gCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcg > 1:3436146/1‑100 (MQ=255) gCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcg > 1:199168/1‑100 (MQ=255) gCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcg > 2:4351394/1‑100 (MQ=255) ctctCATCAGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcga > 1:4939335/1‑100 (MQ=255) catcaGGAGCGGAAGCTTTTCAGGCTTTCAGTTTGAGTGATGCGCAGGAGAAAAACCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGcgacgct > 2:5476623/1‑98 (MQ=255) catcaGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGAt > 2:710205/1‑100 (MQ=255) catcaGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGAt > 1:5177198/1‑100 (MQ=255) caGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTgc > 2:130886/1‑100 (MQ=255) caGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTgc > 1:2546239/1‑100 (MQ=255) caGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTgc > 1:2846758/1‑100 (MQ=255) aGGAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTgcg < 1:2074862/100‑1 (MQ=255) ggAGCGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTgcgc > 2:4132800/1‑100 (MQ=255) gtggAAGCTTATCACGCTCACAGTTTGAGAGATGTGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATCGAAAGCAAGGCAACGCCTGCgccag < 2:1837124/98‑1 (MQ=255) cGGAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagc < 1:1602144/100‑1 (MQ=255) ggAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagcc > 1:728901/1‑100 (MQ=255) ggAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagcc < 1:1067923/100‑1 (MQ=255) ggAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCcccagcc > 2:230799/1‑100 (MQ=255) gAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagcca > 1:5569172/1‑100 (MQ=255) gAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagcca > 2:2882836/1‑100 (MQ=255) gAAGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCgccagcca > 1:2169404/1‑100 (MQ=255) aGCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAAt < 2:2431564/100‑1 (MQ=255) gCTTTTCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATa > 1:4048761/1‑100 (MQ=255) ttttCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGc < 1:269148/100‑1 (MQ=255) tttCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCg < 2:4081297/100‑1 (MQ=255) tttCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCg < 1:2572614/100‑1 (MQ=255) tttCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCg < 2:4644043/100‑1 (MQ=255) tttCAAGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCg < 2:3389262/100‑1 (MQ=255) ttCAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGa < 1:3384859/100‑1 (MQ=255) cAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAAt < 2:3774015/100‑1 (MQ=255) cAGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAAt > 1:2859467/1‑100 (MQ=255) aGGCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATa < 2:846069/100‑1 (MQ=255) ggCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATAc > 2:4510386/1‑100 (MQ=255) gCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACg > 2:1583209/1‑100 (MQ=255) gCTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACg < 2:3184704/100‑1 (MQ=255) cTTCCAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGc > 2:3011672/1‑100 (MQ=255) | TATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGC > NC_000913/3081929‑3082121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |