| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,290,794 | A→C | I661L (ATC→CTC) | yraJ → | putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,290,794 | 0 | A | C | 98.5% | 734.2 / ‑2.0 | 208 | I661L (ATC→CTC) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base C (100/102); total (101/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 222 total aligned reads displayed.
CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATC > NC_000913/3290697‑3290890 | cGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTAGTtctc < 1:4640823/100‑1 (MQ=255) gcAGTGACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGCTACCGGCGGCGTGGTTctcca < 1:4759679/99‑1 (MQ=255) ccAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca < 1:3300501/100‑1 (MQ=255) aGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatc > 2:4367664/1‑100 (MQ=255) aGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatc < 1:173246/100‑1 (MQ=255) aGTTACCGTTAACCTTATGGCACCTTCAGTGCCGCATACAGCTACGGTAATGAAAGCAGCCAATACAATTACGGCGTTACCGGCGGGGTGGTtctcgcta > 2:5071113/1‑96 (MQ=255) gTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatcc < 2:2190112/100‑1 (MQ=255) aCCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCa < 2:545609/100‑1 (MQ=255) ccGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCAt > 2:1166673/1‑100 (MQ=255) cGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATGACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATg > 1:408542/1‑100 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgn < 2:204808/100‑2 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg < 2:4002788/100‑1 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 1:532105/1‑100 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 2:4205999/1‑100 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg < 2:4751435/100‑1 (MQ=255) gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 1:3609032/1‑100 (MQ=255) tCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCg < 2:2947199/100‑1 (MQ=255) tCACCTTATGGCACCATCAGTGCCGTATACAGCTACGTTAATGACAGCAGCCAATACAAGTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCg < 2:1613172/100‑1 (MQ=255) aCCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTg > 1:4863530/1‑100 (MQ=255) aCCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTg < 1:1182539/100‑1 (MQ=255) ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa > 1:2120161/1‑100 (MQ=255) ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa < 1:2843911/100‑1 (MQ=255) cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGan < 1:2393716/100‑2 (MQ=255) cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc < 2:5222993/100‑1 (MQ=255) cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc > 1:4285724/1‑100 (MQ=255) ttATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACg > 1:2978696/1‑100 (MQ=255) ctATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACg < 2:4393546/99‑1 (MQ=255) ntGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACgag > 1:4435463/2‑98 (MQ=255) tGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctc < 1:1530487/100‑1 (MQ=255) ggCAGCTTCCGTGCTCGATAGAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCAGCCTCATGGCGTGACGctct < 2:146858/100‑1 (MQ=255) ggCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctct > 1:922371/1‑100 (MQ=255) ggCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctct > 2:2221775/1‑100 (MQ=255) gCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCtctc < 2:1749233/100‑1 (MQ=255) cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 1:3584083/100‑1 (MQ=255) cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg > 2:1082732/1‑100 (MQ=255) cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 1:5046478/100‑1 (MQ=255) cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg > 1:3859786/1‑100 (MQ=255) ccTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCa < 1:3805865/100‑1 (MQ=255) ttCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAat < 1:4121608/100‑1 (MQ=255) tCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGCGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAata < 2:2418881/100‑1 (MQ=255) tGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTg < 1:4686397/100‑1 (MQ=255) gCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTgg > 1:2416969/1‑100 (MQ=255) ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg > 2:4928282/1‑100 (MQ=255) ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 1:2901667/100‑1 (MQ=255) ccGGATACAGCGACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 2:3641259/100‑1 (MQ=255) ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa > 2:1853212/1‑100 (MQ=255) ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa < 2:1257098/100‑1 (MQ=255) gcatccAGCTACGGTAATGACAGCAGCCCATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa < 2:4664212/95‑1 (MQ=255) gATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa > 1:786792/1‑100 (MQ=255) gATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa > 2:4692367/1‑100 (MQ=255) aTACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAAc < 1:5243148/100‑1 (MQ=255) aTACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAAc > 2:5373098/1‑100 (MQ=255) gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt > 1:4605526/1‑100 (MQ=255) gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt < 2:645356/100‑1 (MQ=255) gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt < 2:1850513/100‑1 (MQ=255) tACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTg < 1:2064493/100‑1 (MQ=255) aCGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTgc > 1:1804979/1‑100 (MQ=255) gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt < 2:776653/100‑1 (MQ=255) gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt < 1:627696/100‑1 (MQ=255) tAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCtt < 2:4794908/100‑1 (MQ=255) aTGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTAt > 2:2093682/1‑100 (MQ=255) tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc > 1:3529108/1‑100 (MQ=255) tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc > 1:415948/1‑100 (MQ=255) gACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCg < 2:2714054/100‑1 (MQ=255) aCAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGa < 2:4299952/100‑1 (MQ=255) agcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATg < 2:2912441/100‑1 (MQ=255) agcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATg > 2:2830664/1‑100 (MQ=255) gcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTaa > 1:1860827/1‑100 (MQ=255) atctcAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 1:69497/96‑1 (MQ=255) aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 2:1732029/100‑1 (MQ=255) aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 1:4722508/100‑1 (MQ=255) aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 2:1840047/100‑1 (MQ=255) aTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGa > 1:5159653/1‑100 (MQ=255) tACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAg < 2:3175146/100‑1 (MQ=255) cAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCa > 2:4039585/1‑100 (MQ=255) cAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCa > 2:2995040/1‑100 (MQ=255) aaTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCAGGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCan < 1:1597471/100‑2 (MQ=255) aTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATc > 2:2555838/1‑100 (MQ=255) aTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATc < 1:214181/100‑1 (MQ=255) ttACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCt > 1:5138039/1‑100 (MQ=255) aCGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTgg > 1:3962082/1‑100 (MQ=255) cGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc > 1:2405072/1‑100 (MQ=255) ggCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCg < 2:2638027/100‑1 (MQ=255) cGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTg > 2:73827/1‑100 (MQ=255) ttACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAg > 2:1140659/1‑100 (MQ=255) aCCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGa < 2:3553068/100‑1 (MQ=255) ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGATGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt > 2:3971466/1‑100 (MQ=255) ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt < 1:2669136/100‑1 (MQ=255) cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa > 1:5442966/1‑100 (MQ=255) cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa < 2:698312/100‑1 (MQ=255) cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa > 1:2880448/1‑100 (MQ=255) cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa < 2:3833041/100‑1 (MQ=255) gcggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACa < 1:139253/100‑1 (MQ=255) ggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaaa > 1:1010970/1‑100 (MQ=255) cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:1687276/100‑1 (MQ=255) cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:2454290/100‑1 (MQ=255) cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:349963/100‑1 (MQ=255) tGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTa > 2:5141802/1‑100 (MQ=255) tGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTa > 1:3706622/1‑100 (MQ=255) gTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTAta > 2:4502575/1‑99 (MQ=255) | CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATC > NC_000913/3290697‑3290890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |