| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,414,497 | T→G | Y212D (TAC→GAC) | acrE → | cytoplasmic membrane lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,414,497 | 0 | T | G | 99.1% | 793.0 / ‑4.4 | 221 | Y212D (TAC→GAC) | acrE | cytoplasmic membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base G (109/109); total (112/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 221 total aligned reads displayed.
TAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAG > NC_000913/3414400‑3414593 | tAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGAc < 1:4387069/100‑1 (MQ=255) aGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACg > 2:4586797/1‑100 (MQ=255) aGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATCGGCCAACGACTGAACTGGCGACTGTCCCGCAGCTCGAGCCTGTCGACg > 2:3161875/1‑100 (MQ=255) gCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGt > 1:2727600/1‑100 (MQ=255) cGGACGTATCGGCAAATCGACTGTGACCGAAGGCTCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGtt < 2:294502/100‑1 (MQ=255) ggACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTg < 2:2056432/100‑1 (MQ=255) aCGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAt < 2:3495371/100‑1 (MQ=255) aCGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAt > 1:2605462/1‑100 (MQ=255) cGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtg < 1:590915/100‑1 (MQ=255) cGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtg < 1:3877528/100‑1 (MQ=255) cGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtg < 1:2189381/100‑1 (MQ=255) cGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtg < 1:1328785/100‑1 (MQ=255) gTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgt > 1:796378/1‑100 (MQ=255) gTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgt > 1:5479753/1‑100 (MQ=255) gTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgt > 1:950526/1‑100 (MQ=255) gTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgt > 2:5443200/1‑100 (MQ=255) tATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgtg < 2:1660002/100‑1 (MQ=255) tATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgtg > 2:4439358/1‑100 (MQ=255) aTCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGa > 2:3972560/1‑100 (MQ=255) tCGGCAAATCGACTCTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGAc < 2:5019190/100‑1 (MQ=255) cGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGAtgtagat > 2:4057777/1‑96 (MQ=255) cGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGAcc > 2:1838224/1‑100 (MQ=255) ggCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGAccc > 1:4263838/1‑100 (MQ=255) ggCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGAccc > 2:1317395/1‑100 (MQ=255) ggCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGAccc > 1:5102443/1‑100 (MQ=255) aaaTCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAAt > 1:2152270/1‑100 (MQ=255) agcGACTGTGACCGAAGGCGCTCTTGTCACTACTGGGCAAACGACTGAACTGGCGACTGTCCAGCCGCTCGATCCTGTCGACGTTGATGTGACCCAATcc < 2:3594299/98‑1 (MQ=255) aTCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATcc > 1:2785293/1‑100 (MQ=255) aTCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATcc < 1:4615547/100‑1 (MQ=255) aTCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATcc > 1:4022668/1‑100 (MQ=255) gACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAGACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGc < 1:5251951/100‑1 (MQ=255) gACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGc < 1:4240124/100‑1 (MQ=255) gACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGc < 1:3049567/100‑1 (MQ=255) gACTGTGACCGAAGGCGCTCTTGACACTAAGGGGCAAACGACTGAACTGGCGACCGTCCAGCAGCTCGATCATATCGACGTTGATGTGACCCAAGCCAGc < 2:3369822/100‑1 (MQ=255) cTGTGACCGAAGGTGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCaa < 2:3729198/100‑1 (MQ=255) cTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCaa > 1:3783378/1‑100 (MQ=255) cTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCaa < 2:1468323/100‑1 (MQ=255) cTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCaa > 1:3901499/1‑100 (MQ=255) gtgACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACg < 1:5296362/100‑1 (MQ=255) gtgACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACg > 2:3644243/1‑100 (MQ=255) naCCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGAt > 1:4807647/2‑100 (MQ=255) ccGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGAttt > 1:4408896/1‑100 (MQ=255) gAAGGCGCTCTTGTCGCTAAAGCGCAAACGACTAAACTGGCTACCCTCCAGCAGCTCGATCCTATCGACGTTGATGTGTCCCAATCCAGCAACTATTTTa < 2:5235788/100‑1 (MQ=255) gAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTa > 2:2044451/1‑100 (MQ=255) gAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTa > 1:2541602/1‑100 (MQ=255) gAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTa > 2:1504106/1‑100 (MQ=255) aGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATg < 2:3094788/100‑1 (MQ=255) cgcTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAgg > 1:4962447/1‑100 (MQ=255) ctctTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCt < 2:4367568/100‑1 (MQ=255) ctctTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCt < 1:923755/100‑1 (MQ=255) ctTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGa > 2:2814057/1‑100 (MQ=255) ctTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGa < 2:2155774/100‑1 (MQ=255) ctTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGa > 1:1809093/1‑100 (MQ=255) ttCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGc < 1:3473374/99‑1 (MQ=255) tCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCa > 2:3441114/1‑100 (MQ=255) cACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCaa > 2:3663485/1‑100 (MQ=255) cTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATc > 1:4477904/1‑100 (MQ=255) cTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATc > 1:4569400/1‑100 (MQ=255) cTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATc > 1:414963/1‑100 (MQ=255) gggCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTag > 1:2224537/1‑100 (MQ=255) ggCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTaga < 1:1753224/100‑1 (MQ=255) ggCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTaga < 1:3125034/100‑1 (MQ=255) gCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGCTGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTagcg > 2:2274569/1‑98 (MQ=255) cAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGc > 2:3614557/1‑100 (MQ=255) cAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGc < 2:1193367/100‑1 (MQ=255) aaaCGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCa > 1:163419/1‑100 (MQ=255) aaaCGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCa > 1:1514250/1‑100 (MQ=255) aaCGACTGAACTGGCGACTGTCCAGCAGCTCGATCTTGTCCACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGCAGCAATCCCTAGAGCaa > 2:5361290/1‑100 (MQ=38) aCTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGaa > 2:4331992/1‑100 (MQ=255) gAACTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAAtt < 1:1859500/100‑1 (MQ=255) aCTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTg < 2:3995993/100‑1 (MQ=255) aCTGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTg < 1:3639056/100‑1 (MQ=255) tGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCa < 1:1019425/100‑1 (MQ=255) tGGCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTCTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCa < 2:4224868/100‑1 (MQ=255) tGGCGACTGTCCAGCAGCTCGATCCGATCGACGTTAATGAGACCCAATCCAGCAACCATTTTATGGGGCTGAAGCAATCCGTAGAGCAAGGAAATGTGCa < 2:4658399/100‑1 (MQ=255) ggCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGCTTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCAt > 1:1412053/1‑100 (MQ=255) ggCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCAt < 1:5141790/100‑1 (MQ=255) ggCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCAt < 1:3734535/100‑1 (MQ=255) ggCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCAt > 1:3706933/1‑100 (MQ=255) ggCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCAt < 1:2323908/100‑1 (MQ=255) gCGACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATa < 1:863684/100‑1 (MQ=255) gACTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCCGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAg > 2:388883/1‑100 (MQ=255) gACTGTCCAGCAGCACGAGCCTATGGACGTTGATGGGACCTAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAg < 2:4509817/100‑1 (MQ=255) aCTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAgg < 2:2587194/100‑1 (MQ=255) cTGTCCAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGTCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGa > 2:556809/1‑100 (MQ=255) ccAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAAc > 1:3623050/1‑100 (MQ=255) ccAGCAGCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAAc < 1:1346448/100‑1 (MQ=255) cagcagCTCGATCCTATCGACGTTGATGTGTCCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACg < 2:4836602/100‑1 (MQ=255) cagcagCTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACg < 2:699907/100‑1 (MQ=255) agcagcTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGc > 1:1186526/1‑100 (MQ=255) cagcTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGcca < 1:5417616/100‑1 (MQ=255) agcTCGATCCTATCGACCTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGCAAATTTGCATAAGGAAAACGccac < 1:2918443/100‑1 (MQ=255) gcTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGccacc > 2:324083/1‑100 (MQ=255) gcTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGccacc < 2:5123119/100‑1 (MQ=255) gcTCGATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGccacc > 1:4880039/1‑100 (MQ=255) tCGATCCTATCGACGTTGATGTGACCCAAACCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAg < 1:4924913/100‑1 (MQ=255) gATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAATTTTGCATAAGGAAAACGCCACCAGCa > 1:4528447/1‑100 (MQ=255) gATCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCa > 2:4999955/1‑100 (MQ=255) aTCCTATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCaa > 1:892356/1‑100 (MQ=255) tATCGACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTa > 2:1812412/1‑100 (MQ=255) | TAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAG > NC_000913/3414400‑3414593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |