| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,468,138 | T→G | G572G (GGA→GGC) | chiA ← | periplasmic endochitinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,468,138 | 0 | T | G | 98.4% | 670.5 / ‑5.0 | 190 | G572G (GGA→GGC) | chiA | periplasmic endochitinase |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base G (81/106); total (82/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
CAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGA > NC_000913/3468041‑3468234 | cAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCAACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGcc < 1:2490878/100‑1 (MQ=255) aGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCg < 1:4844397/100‑1 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGTGTACCTACGCGCTCTTTGGTGCCgg < 2:689761/100‑1 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg < 2:340574/100‑1 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg > 2:5493634/1‑100 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg < 2:3019260/100‑1 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg < 1:463141/100‑1 (MQ=255) cAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTc > 2:2763253/1‑100 (MQ=255) gATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCa > 2:2048562/1‑100 (MQ=255) aTCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAg < 2:2088967/100‑1 (MQ=255) tCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGt < 2:1592572/100‑1 (MQ=255) cGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTca < 1:4932307/100‑1 (MQ=255) gggATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaa > 2:2792139/1‑100 (MQ=255) ggATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaac < 2:397413/100‑1 (MQ=255) ggATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaac < 2:3344039/100‑1 (MQ=255) gATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaaca < 2:3302930/100‑1 (MQ=255) gATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaaca > 2:299148/1‑100 (MQ=255) cGTATTCAGCGTAGAGTCGACATACGGTGCATAAACGTGTGTCGGCCACGCTGTCGTCGGCGTACCGACGCGCTCTTTGGTGCCGGTGCAGTCAACaaaa < 2:4105150/100‑1 (MQ=255) aTTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAaca < 1:751726/100‑1 (MQ=255) ttCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAacan < 1:4426498/100‑2 (MQ=255) tCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACg < 2:5016609/100‑1 (MQ=255) cAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGc > 1:1396426/1‑100 (MQ=255) cGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCAc > 1:3719016/1‑100 (MQ=255) aGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCCCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGtt > 1:1935427/1‑100 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg > 2:2405262/1‑100 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg < 1:3957901/100‑1 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg > 1:3706959/1‑100 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg > 2:158638/1‑100 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg < 1:91414/100‑1 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg < 2:454732/100‑1 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg < 1:5203893/100‑1 (MQ=255) cATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTc < 2:3643579/100‑1 (MQ=255) cATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTc < 1:1499504/100‑1 (MQ=255) aTACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCa < 1:2730571/100‑1 (MQ=255) aTACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCa < 1:2707099/100‑1 (MQ=255) tACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAg > 2:3521719/1‑100 (MQ=255) tACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAg > 1:3013645/1‑100 (MQ=255) tACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAg > 1:1732643/1‑100 (MQ=255) aCGGTGCATAAACGTGTTTCGGCCAAGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGa > 1:4986378/1‑100 (MQ=255) cGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGaa > 1:2506516/1‑100 (MQ=255) ggTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAg > 2:1157216/1‑100 (MQ=255) ggTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAg < 2:261840/100‑1 (MQ=255) ggTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAg > 1:101743/1‑100 (MQ=255) gTGCATAACCGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCGTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAgg < 1:1733419/100‑1 (MQ=255) gTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAGCAAAAACACGCCACGGGTTGCTGTCAGAAgg < 1:4468716/100‑1 (MQ=255) gTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAgg < 1:2031024/100‑1 (MQ=255) gTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAgg < 2:2670787/100‑1 (MQ=255) gTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAgg < 2:5289561/100‑1 (MQ=255) tGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGga < 2:883962/100‑1 (MQ=255) tGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGga > 1:1610471/1‑100 (MQ=255) gCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGgag < 1:3674581/100‑1 (MQ=255) tAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGaaa > 1:5109924/1‑100 (MQ=255) tAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGaaa > 2:586273/1‑100 (MQ=255) aaaCGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGaacc > 2:4473483/1‑98 (MQ=255) aCGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACtt > 2:1752970/1‑100 (MQ=255) cGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACttt > 1:1833839/1‑100 (MQ=255) gtgtTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTc < 1:5521147/100‑1 (MQ=255) gtTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTg > 2:1235842/1‑100 (MQ=255) gtTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTg < 2:4912461/100‑1 (MQ=255) gtTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTg < 1:1877732/100‑1 (MQ=255) ttCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCa > 1:3432127/1‑100 (MQ=255) cGGCCACGCCTTCTTCGGCGTACATACGCGCTCTTTGGTGCCTGTCCAGTCAACAAAAACGCGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACt < 1:4856417/100‑1 (MQ=255) ggCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACtt > 1:3601817/1‑100 (MQ=255) gCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACttt > 2:5093762/1‑100 (MQ=255) gCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACttt > 1:1583045/1‑100 (MQ=255) gCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACttt < 1:1530102/100‑1 (MQ=255) ccACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTa > 1:2374463/1‑100 (MQ=255) ccACGCTTTCTTCGGCGTACCTACGCGCGCTTTGGGGCCGGTCCAGTCAACAAAAACACGCAACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTa < 1:1435992/100‑1 (MQ=255) cACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTAc < 2:2316121/100‑1 (MQ=255) cGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTActc > 2:954897/1‑100 (MQ=255) gCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTActct < 2:3231185/100‑1 (MQ=255) cTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTg < 1:1088716/100‑1 (MQ=255) ttcttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTgag < 2:90226/100‑1 (MQ=255) cttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGaa > 2:4334579/1‑100 (MQ=255) cttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGaa > 1:1008322/1‑100 (MQ=255) tcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAAt < 1:2459682/100‑1 (MQ=255) gCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTa < 2:3568561/100‑1 (MQ=255) cGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAg > 1:4171607/1‑100 (MQ=255) cGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGACAAACTTTCTGCACTTTACTCTGAGAAATGTAg > 1:2180544/1‑100 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt < 2:2628818/100‑1 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt < 2:1870140/100‑1 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt > 1:1196238/1‑100 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt < 2:5127845/100‑1 (MQ=255) aCCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTc < 2:4354893/100‑1 (MQ=255) tACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTcaca > 1:2243832/1‑100 (MQ=255) aCGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCacac < 1:3610426/100‑1 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACAcc > 2:770691/1‑100 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAATCAACAAAAACACGCCACGGGTTGCTGCGAGAAGGAGAAACTTTCTAAACTTTACTCTGAGAAATGTCGCTCACAcc > 2:177606/1‑100 (MQ=255) cgcTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGt > 1:3659794/1‑100 (MQ=255) gcTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGtt < 1:5438747/100‑1 (MQ=255) ttctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTa < 2:3620335/99‑1 (MQ=255) ctctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTa < 2:479151/100‑1 (MQ=255) ctctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTa > 2:2013774/1‑100 (MQ=255) tctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTaa > 1:3653995/1‑100 (MQ=255) ctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTaaa > 1:2843621/1‑100 (MQ=255) tttGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAg < 2:1346237/100‑1 (MQ=255) ttGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGGAACTTTCTGCACTTTTCTCTGAGAAATGTAGTTCACACCGTTAAAGc < 2:221759/100‑1 (MQ=255) tGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCg < 2:1563620/100‑1 (MQ=255) tGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCg < 1:2070608/100‑1 (MQ=255) ggTGCCGGTCCAGTCAACTAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCCGCGAAATGTAGTTCACACCGTTAAAGCGa > 2:5453364/1‑100 (MQ=255) | CAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGA > NC_000913/3468041‑3468234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |