| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,807,410 | T→G | K230T (AAA→ACA) | waaQ ← | lipopolysaccharide core biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,807,410 | 0 | T | G | 99.5% | 742.7 / ‑5.1 | 209 | K230T (AAA→ACA) | waaQ | lipopolysaccharide core biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (104/104); total (104/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 211 total aligned reads displayed.
CCCGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCG > NC_000913/3807314‑3807506 | cccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTg > 2:1811790/1‑100 (MQ=255)cccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTg > 2:4648256/1‑100 (MQ=255) ccGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGtgttgt < 2:1698682/100‑1 (MQ=255) cgcAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCg > 2:3466610/1‑100 (MQ=255) gcAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGc > 2:3736164/1‑100 (MQ=255) cAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCa > 2:3184944/1‑100 (MQ=255) aGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCaa > 2:4403750/1‑100 (MQ=255) naaTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc > 2:1425534/2‑100 (MQ=255) gAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc < 1:5023069/100‑1 (MQ=255) gAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAc > 1:4007078/1‑100 (MQ=255) aaTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAcc < 1:1811742/100‑1 (MQ=255) aTCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCt < 1:4898692/100‑1 (MQ=255) cacaCGAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAAcgtcgt > 1:4992999/1‑100 (MQ=255) cacaCCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt < 2:2926018/100‑1 (MQ=255) cacaCCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt > 2:1151409/1‑100 (MQ=255) cacaCCAATAAAAAGCACTGCATGATCAATTAATGCAACCAGTTCAGGAAGACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGt > 1:242016/1‑100 (MQ=255) acacCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTg < 1:454495/100‑1 (MQ=255) ccAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCaa > 1:3977208/1‑100 (MQ=255) acAATAAAAAGCAATGCATGATCACTTAATGCACCCAGTTCAGGAAGACGTGTTTTACCTGCAAGCCCAGTAATCGGAGATGTTTCTCAACCTCGTGCaa > 2:779697/2‑100 (MQ=255) cgaTAAAAAGCACTGCATGATCAATTAATGCATCCAGTTCGGGAAAACGTGCTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAt < 2:4457280/98‑1 (MQ=255) cAATAAAAAGCACTGCATGATCAATTAATGCACCAAGTTCAGGAAAACGTGTTATACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAt > 2:5078032/1‑100 (MQ=255) aaTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtc > 1:2916007/1‑100 (MQ=255) aTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtct < 1:2991606/100‑1 (MQ=255) aTAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtct > 1:2413295/1‑100 (MQ=255) tAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAAtctc > 2:3903607/1‑100 (MQ=255) aaaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTTGCAACCTCGTGCAATCTCa > 2:322327/1‑100 (MQ=255) aaaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCa < 2:2471901/100‑1 (MQ=255) aaaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCAt > 2:4876229/1‑100 (MQ=255) aaaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATc < 2:5309761/100‑1 (MQ=255) aaGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCt < 2:3549877/100‑1 (MQ=255) gCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTac > 2:3854426/1‑100 (MQ=255) cACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTaca < 1:4783817/100‑1 (MQ=255) cTGCATGCTCAATTAATGCACAAAAAAAAAAAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca < 2:2710171/100‑1 (MQ=255) cTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca > 2:1673793/1‑100 (MQ=255) cTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTAcaca < 2:2418463/100‑1 (MQ=255) gCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAg > 1:2975183/1‑100 (MQ=255) gCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAg > 1:2223022/1‑100 (MQ=255) tGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCga > 2:3989475/1‑100 (MQ=255) gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:3592873/1‑100 (MQ=255) gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:2810065/1‑100 (MQ=255) gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 1:830909/1‑100 (MQ=255) gATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgag > 2:2124111/1‑100 (MQ=255) aTCAATTAATGCACCCAGTTCAGGACAACGAGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgagc > 2:284917/1‑99 (MQ=255) aTCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgaga < 1:2640738/100‑1 (MQ=255) aTCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCgaga < 2:3126218/100‑1 (MQ=255) tCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGat < 1:693095/100‑1 (MQ=255) aaTTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGatca > 2:4083119/1‑100 (MQ=255) tgaaTGCACCCATTTCATGAAAACGTGGTGTACCTGCAAGGCCAGTAATGGGGTTTGTTTCGCAACCGCGGTCAATCTCATCTACACAAGCGAGatcagc < 1:5300531/98‑3 (MQ=255) aaTGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTg > 1:5199856/1‑100 (MQ=255) aaTGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTg > 2:1898409/1‑100 (MQ=255) gCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGTTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCg < 2:1083584/100‑1 (MQ=255) cACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCACTAATGGGCGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGa > 1:4955095/1‑100 (MQ=255) aCCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAg > 1:878926/1‑100 (MQ=255) ccAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAggg < 1:2075801/100‑1 (MQ=255) ccAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAggg < 1:2624687/100‑1 (MQ=255) cAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGc > 2:2327484/1‑100 (MQ=255) cAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGc < 1:1112733/100‑1 (MQ=255) aGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGcc < 1:1693658/100‑1 (MQ=255) aGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGcc < 1:3211413/100‑1 (MQ=255) ttCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCca < 1:2192060/100‑1 (MQ=255) tCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCcac < 1:4153708/100‑1 (MQ=255) cAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCcaca > 2:1366075/1‑100 (MQ=255) ggAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAgg > 1:1245732/1‑100 (MQ=255) gAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGt > 1:868058/1‑100 (MQ=255) aaaaCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGtt < 1:3537150/100‑1 (MQ=255) aaCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAg < 1:1285607/100‑1 (MQ=255) aaCGTGTTTTACCTGCAAGGCCAGTAATGGGGGGTGTTTCGCGACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAg < 2:1070032/100‑1 (MQ=255) aCGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGc < 2:419893/100‑1 (MQ=255) cGTGTTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCACAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGca < 1:4074752/100‑1 (MQ=255) gtgtTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGcac < 1:4320807/100‑1 (MQ=255) gtTTTACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACaa > 1:1507128/1‑100 (MQ=255) ttttACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAAc > 1:3124571/1‑100 (MQ=255) tACCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGCTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTg > 2:4556079/1‑100 (MQ=255) aCCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGa > 2:2524210/1‑100 (MQ=255) aCCTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGa > 2:1271913/1‑100 (MQ=255) ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt > 2:2634070/1‑100 (MQ=255) ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt < 2:2940126/100‑1 (MQ=255) ccTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGAt < 2:2277405/100‑1 (MQ=255) cTGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATa > 2:1549174/1‑100 (MQ=255) tGCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAg < 1:3889994/100‑1 (MQ=255) gCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGc < 2:2260535/100‑1 (MQ=255) gCAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGc > 1:2306013/1‑100 (MQ=255) cAAGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGcc > 2:4981774/1‑100 (MQ=255) aaGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGccn < 1:1444370/100‑2 (MQ=255) aaGGCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCt < 1:5051798/100‑1 (MQ=255) ggCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCg > 2:652763/1‑100 (MQ=255) gCCAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGc > 2:1308145/1‑100 (MQ=255) cAGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTg > 2:3156917/1‑100 (MQ=255) aGTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGt < 1:1015037/100‑1 (MQ=255) gTAATGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGtt > 1:472996/1‑100 (MQ=255) aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 1:2140211/100‑1 (MQ=255) aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 2:3830169/100‑1 (MQ=255) aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 1:1511958/100‑1 (MQ=255) aaTGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGc < 2:1488026/100‑1 (MQ=255) tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg > 1:3291839/1‑100 (MQ=255) tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg < 1:3762712/100‑1 (MQ=255) tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg < 1:4837631/100‑1 (MQ=255) tGGGTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAg > 1:1211171/1‑100 (MQ=255) gggTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAgc > 1:5488075/1‑100 (MQ=255) ggTGTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAgcg > 1:42078/1‑100 (MQ=255) | CCCGGCGCAGAATCCACACCAATAAAAAGCACTGCATGATCAATTAATGCACCCAGTTCAGGAAAACGTGTTTTACCTGCAAGGCCAGTAATGGGTTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCG > NC_000913/3807314‑3807506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |