| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,362,301 | T→G | pseudogene (53/84 nt) | yjdQ ← | pseudogene, P4‑like integrase remnant |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,362,301 | 0 | T | G | 99.6% | 832.0 / NA | 233 | pseudogene (53/84 nt) | yjdQ | pseudogene, P4‑like integrase remnant |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base G (93/138); minor base A (0/1); total (93/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 233 total aligned reads displayed.
GATTGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTTTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGCTCAGGAA > NC_000913/4362205‑4362397 | gATTGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTAt < 1:125519/100‑1 (MQ=255) aTTGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATg < 2:2301026/100‑1 (MQ=255) ttGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATgg < 2:1723951/100‑1 (MQ=255) ttGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATgg > 1:1415174/1‑100 (MQ=255) tgtgAGTCCTTCCATGAGGAAGCTAACTGATACTTTTGTGTTTGTTCTCATGCCGAAAATATCATCGGTCGCCGTTCAGACCGGTTTTGTGCTGTATGGa < 2:4552985/100‑1 (MQ=255) gTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGAt < 1:5054518/100‑1 (MQ=255) tAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAACTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTTTATGGATGc < 2:4928614/100‑1 (MQ=255) aGTCTTTGCATGAGCAAGCGAACTGATACATTTCTTTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCg < 2:3301082/100‑1 (MQ=255) aGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCg < 2:4474324/100‑1 (MQ=255) gTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGt > 1:4690420/1‑100 (MQ=255) gTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGt < 2:134297/100‑1 (MQ=255) tCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGtt > 1:3228738/1‑100 (MQ=255) tCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGtt > 2:2819811/1‑100 (MQ=255) cTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTa > 1:430738/1‑100 (MQ=255) cTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTa > 2:2721791/1‑100 (MQ=255) tttGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTAc < 1:3864690/100‑1 (MQ=255) tttGCATGAGCAAGCGAACTGATACATTTCGCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTAc < 1:4373036/100‑1 (MQ=255) tGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGc < 1:943060/100‑1 (MQ=255) tGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGc < 2:41969/100‑1 (MQ=255) tGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGc < 1:4548267/100‑1 (MQ=255) tGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGc > 1:1975180/1‑100 (MQ=255) gCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGGTGTGTGGATGCGTTACGcc > 2:1099224/1‑99 (MQ=255) cATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTc > 1:3739398/1‑100 (MQ=255) aTGAGCAAGCGCACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTAGTGCTGTATGGATGCGTTACGCTcc < 2:4391392/100‑1 (MQ=255) tGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATATCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCt > 2:3217333/1‑100 (MQ=255) gNGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtg > 2:1833575/1‑100 (MQ=255) gAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtg < 2:3642083/100‑1 (MQ=255) aGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtga > 1:568346/1‑100 (MQ=255) gCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtgat > 1:5341327/1‑100 (MQ=255) cAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtgatg < 1:3049604/100‑1 (MQ=255) cAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtgatg < 1:3828920/100‑1 (MQ=255) cAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtgatg < 1:22015/100‑1 (MQ=255) aaGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCtgatga < 1:2350348/100‑1 (MQ=255) aGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGAc > 2:4266880/1‑100 (MQ=255) gAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTc > 1:2390824/1‑100 (MQ=255) aaCTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCa > 1:3693613/1‑100 (MQ=255) tGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCAttt > 2:5023632/1‑100 (MQ=255) tGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCAttt < 1:1190933/100‑1 (MQ=255) gatctcATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCAttt < 1:1019157/95‑1 (MQ=255) gATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTg < 2:5311402/100‑1 (MQ=255) aCATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACg < 1:90475/100‑1 (MQ=255) aCATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACg < 1:4147290/100‑1 (MQ=255) naTTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGt > 1:4437419/2‑100 (MQ=255) cATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGt < 2:3077751/100‑1 (MQ=255) aTTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGtt > 1:1657064/1‑100 (MQ=255) tttCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTc < 1:2989827/100‑1 (MQ=255) tttCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTc < 2:5458278/100‑1 (MQ=255) ctctTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAAc < 1:1436651/100‑1 (MQ=255) tctTTGTTCTCATTCAGAAAATCTCATCATTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACa < 1:5476260/100‑1 (MQ=255) tctTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACa < 1:356284/100‑1 (MQ=255) tctTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACa > 2:3437373/1‑100 (MQ=255) tctTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACa < 2:2432419/100‑1 (MQ=255) tttGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGc > 1:401975/1‑100 (MQ=255) ttGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCa < 2:2366830/100‑1 (MQ=255) tGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCAt < 1:4770614/100‑1 (MQ=255) gTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATc > 2:4169117/1‑100 (MQ=255) ttCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCa > 2:4054871/1‑100 (MQ=255) ttCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGc > 1:3760373/1‑100 (MQ=255) ttCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGc < 2:1965625/100‑1 (MQ=255) cAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCg > 2:2843580/1‑100 (MQ=255) cAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCg > 2:1786092/1‑100 (MQ=255) aGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGc > 2:4352714/1‑100 (MQ=255) gAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCCCGGGGCCGCa > 1:334067/1‑100 (MQ=255) gAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCa < 2:4246092/100‑1 (MQ=255) aaaaTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCAc < 2:612794/100‑1 (MQ=255) aaaaTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCAc < 2:2684597/100‑1 (MQ=255) aaaaTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCAc < 1:663979/100‑1 (MQ=255) aaaTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACg < 2:5104822/100‑1 (MQ=255) aTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGan < 2:3098378/100‑2 (MQ=255) aTCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGAc < 1:4174748/100‑1 (MQ=255) ctcATCAGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACAt < 1:3586855/100‑1 (MQ=255) catcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACAttt > 2:5383914/1‑100 (MQ=255) catcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACAttt < 1:4794460/100‑1 (MQ=255) atcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTGCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTc < 1:203688/100‑1 (MQ=255) tcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCa < 2:2133997/100‑1 (MQ=255) tcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCa < 1:1500633/100‑1 (MQ=255) tcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCa < 2:5194225/100‑1 (MQ=255) tcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCa < 1:1806563/100‑1 (MQ=255) tcaGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCa > 1:2851385/1‑100 (MQ=255) aGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACg < 2:2053662/100‑1 (MQ=255) aGTCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACg < 1:518675/100‑1 (MQ=255) tCGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTc < 1:1284449/100‑1 (MQ=255) cGCCGTTCAGACCGGTGTTGTGCTGTATGGCTGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCa > 2:2906908/1‑100 (MQ=255) cGCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCa < 1:2561178/100‑1 (MQ=255) gCCGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAg < 1:3139470/100‑1 (MQ=255) ccGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGt < 1:3518404/100‑1 (MQ=255) ccGTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGt > 1:1734704/1‑100 (MQ=255) gTTCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTa > 1:3219907/1‑100 (MQ=255) ttCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAg < 1:2724676/100‑1 (MQ=255) tCAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGt < 1:2794249/100‑1 (MQ=255) cAGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTg < 2:383368/100‑1 (MQ=255) aGACCGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGc < 2:3396628/100‑1 (MQ=255) aGACCGGTCTTGTGCTGTATGGATGCGTTACGCTCCTGCTGACGTCATTTGACGTTCAACAGCATCACGGTGCCGCACGACATTTCACGTCAGTTAGTGc < 1:5330033/100‑1 (MQ=255) ccGGTGTTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGAGCCGCACGACATTTCACGTCAGTTAGTGCtat < 1:762742/100‑1 (MQ=255) ttgttgtGCCGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGc < 2:4768255/99‑1 (MQ=255) gtgtTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGc < 1:5141594/100‑1 (MQ=255) gtgtTGTGCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGc < 2:1002146/100‑1 (MQ=255) gtgCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGCTCAgg < 2:2625464/100‑1 (MQ=255) gCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGCTCAGGaa > 2:1460308/1‑100 (MQ=255) gCTGTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGCTCAGGaa > 2:3741845/1‑100 (MQ=255) | GATTGTTAGTCTTTGCATGAGCAAGCGAACTGATACATTTCTCTTTGTTCTCATTCAGAAAATCTCATCAGTCGCCGTTCAGACCGGTGTTGTGCTTTATGGATGCGTTACGCTCCTGATGACGTCATTTGACGTTCAACAGCATCACGGGGCCGCACGACATTTCACGTCAGTTAGTGCTATAGCTCAGGAA > NC_000913/4362205‑4362397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |