| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,797 | A→C | I121L (ATT→CTT) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,797 | 0 | A | C | 98.9% | 974.5 / ‑0.4 | 271 | I121L (ATT→CTT) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base C (139/129); total (140/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.50e-01 | |||||||||||
Only 100 of 273 total aligned reads displayed.
TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGGA > NC_000913/4475701‑4475893 | tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACttt > 1:1358081/1‑100 (MQ=255) cTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTc < 1:323248/100‑1 (MQ=255) cTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTc > 2:460477/1‑100 (MQ=255) ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCa < 1:299878/100‑1 (MQ=255) ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCa > 2:2845455/1‑100 (MQ=255) tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCAc < 1:861777/100‑1 (MQ=255) tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCAc < 1:2890519/100‑1 (MQ=255) tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCAc < 1:2298472/100‑1 (MQ=255) aTTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACt > 1:1244558/1‑100 (MQ=255) tCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACttt > 1:508881/1‑100 (MQ=255) cTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCAACCAAGGTGATTATAGAactttcactttc > 1:3903897/1‑100 (MQ=255) tAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTcc < 1:495946/100‑1 (MQ=255) aaaGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCa > 1:2648360/1‑100 (MQ=255) gATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTa < 1:4090071/100‑1 (MQ=255) tACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATc < 2:3881224/100‑1 (MQ=255) aCTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCa > 1:205127/1‑100 (MQ=255) aCTAAAGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAACGTGATTATAGAACTTTCACTTTCCACTATCa > 2:4843820/1‑100 (MQ=255) cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCac > 2:208442/1‑100 (MQ=255) cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCac < 1:2983762/100‑1 (MQ=255) tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCact < 2:1340171/100‑1 (MQ=255) tAAAGGCGAGGACAAAATGAAGTTTTCCATGAATAATGCCGGAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACGTTCCTCTCTCact < 2:86188/100‑1 (MQ=255) aTGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCactac > 2:3395446/1‑100 (MQ=255) aTGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCactac > 2:345726/1‑100 (MQ=255) tGGCAATGAAAAAATGAAGCTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCactact < 2:4917880/100‑1 (MQ=255) ggCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCActacta < 2:1168232/100‑1 (MQ=255) cAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATg < 1:210469/100‑1 (MQ=255) cAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATg > 2:547250/1‑100 (MQ=255) aaTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATgg < 1:597756/100‑1 (MQ=255) aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATggg < 1:3330707/100‑1 (MQ=255) aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATggg > 2:598186/1‑100 (MQ=255) aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATggg < 1:2762251/100‑1 (MQ=255) aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATggg < 1:4516787/100‑1 (MQ=255) aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTAACCCCAGGTGATTATAGAACTTTCACTTTCCCCTATCACTACTATggg > 2:3305605/1‑100 (MQ=255) aTGAAAAAATGAAGTTGTACATGAATAAGCCTGTAGGGGAACGAGCTGTTTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATggg < 1:4188868/100‑1 (MQ=255) tGAAAAAATGAAGTGTTACATGAATAATCCTGTAGGGGAACGAGCTGATGCACCCAAGGTGATTATAGAACTTTCACTTGCCACGATCACTACTATgggg > 2:4931521/1‑100 (MQ=255) gAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGa > 2:415289/1‑100 (MQ=255) gAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGa > 2:5067374/1‑100 (MQ=255) aaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACt > 1:3155534/1‑100 (MQ=255) aaTGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGt > 2:2963099/1‑100 (MQ=255) tGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCa < 2:5284019/100‑1 (MQ=255) gAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa < 2:305298/100‑1 (MQ=255) aaGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg < 2:3134350/100‑1 (MQ=255) aaGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg < 1:346091/100‑1 (MQ=255) tttACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa < 2:1472247/100‑1 (MQ=255) ttACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAt > 2:722892/1‑100 (MQ=255) tACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATa > 2:4457418/1‑100 (MQ=255) aCATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATCATAGAACTTTCACTTTCCTCTATCACTACTATGGGGACTCGTCAAGGACATAc < 1:5164502/100‑1 (MQ=255) cATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa > 2:3169722/1‑100 (MQ=255) tGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGc > 2:1541051/1‑100 (MQ=255) gAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGcc > 1:3966845/1‑100 (MQ=255) ataatCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAt > 2:2334883/1‑100 (MQ=255) taatCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAtt < 1:1646894/100‑1 (MQ=255) atCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat > 2:3230276/1‑100 (MQ=255) atCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat < 2:1773212/100‑1 (MQ=255) atCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat < 2:1043/100‑1 (MQ=255) cTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAtt > 1:1089430/1‑100 (MQ=255) tGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAttt > 2:3457838/1‑100 (MQ=255) tGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAttt > 1:4118407/1‑100 (MQ=255) tGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAttt > 2:560012/1‑100 (MQ=255) gTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTc > 2:2553435/1‑100 (MQ=255) gTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTc > 1:4264907/1‑100 (MQ=255) gTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTc < 1:469300/100‑1 (MQ=255) gTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTc < 1:5456087/100‑1 (MQ=255) tAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTcc > 1:2371075/1‑100 (MQ=255) tAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTcc < 1:559755/100‑1 (MQ=255) aGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCca > 1:1822702/1‑100 (MQ=255) gggAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCcaca < 1:3621079/100‑1 (MQ=255) gAACGAGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAAc < 2:3590202/100‑1 (MQ=255) aaCGAGCGGATCCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAAcc < 1:1186118/100‑1 (MQ=255) aGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACTTGAt < 1:3022397/100‑1 (MQ=255) aGCGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGAt > 2:3949200/1‑100 (MQ=255) cGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATgg < 1:3571512/100‑1 (MQ=255) cGGATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATgg < 2:1075059/100‑1 (MQ=255) gATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGtt > 1:1402086/1‑100 (MQ=255) gATTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGtt > 1:3797835/1‑100 (MQ=255) aTTCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTc < 1:553707/100‑1 (MQ=255) ttCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCg > 2:4057935/1‑100 (MQ=255) ttCACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCg < 1:776873/100‑1 (MQ=255) ttCACCCAAGGTGATGATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCg < 1:1067273/100‑1 (MQ=255) cACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGAc > 1:2925339/1‑100 (MQ=255) cACCCAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGAc < 1:212008/100‑1 (MQ=255) cACCCAAGGTGATTATAGAACTTTCACTTTCCACAATCCCTACTATGGGGACTCGTCAAGTACATACAGCCATTATATTTCCACAACCTGATGGTTCGAc > 2:4688875/1‑100 (MQ=255) aCCCAAGGTGATTATAGAACTTTCACTCTCCACTATCACTACTATGGGGACTCGTCAAGCACATACAGCCATTATATTTCCACAACCTGATGGTTCGACt < 1:4837009/100‑1 (MQ=255) cccAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTa > 1:993317/1‑100 (MQ=255) cccAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTa > 1:5332328/1‑100 (MQ=255) cccAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTa > 2:2826059/1‑100 (MQ=255) cccAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTa > 1:1668515/1‑100 (MQ=255) cAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAAc < 1:1621277/100‑1 (MQ=255) cAAGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAAc < 1:4220615/100‑1 (MQ=255) aaGGTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAAcc < 1:2327943/100‑1 (MQ=255) ggTGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGt > 2:1903157/1‑100 (MQ=255) taaTTATAGAACTTTCACTTTCCACTATCACTTCTATGAGGAATCGTCAAGGACATACAGCCATTATATTTCCACATCTTGATGGTTCGACTAACCGTTa < 2:1713111/98‑1 (MQ=255) tGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTa < 2:2156297/100‑1 (MQ=255) tGATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTa < 2:788677/100‑1 (MQ=255) gATTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTAt > 2:2415474/1‑100 (MQ=255) aTTATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATg < 1:149412/100‑1 (MQ=255) ttATAGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGa < 2:4368494/100‑1 (MQ=255) tataGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGaa > 1:2462118/1‑100 (MQ=255) ataGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAg > 2:3639696/1‑100 (MQ=255) taGAACTTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAgg > 2:2488624/1‑100 (MQ=255) | TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGGA > NC_000913/4475701‑4475893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |