| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,576,712 | T→G | pseudogene (2794/2937 nt) | yjiV → | pseudogene; conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,576,712 | 0 | T | G | 97.3% | 780.4 / 6.8 | 222 | pseudogene (2794/2937 nt) | yjiV | pseudogene; conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (2/4); new base G (106/110); total (108/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
TATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGC > NC_000913/4576615‑4576807 | tatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCa < 1:5354541/100‑1 (MQ=255) atCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCAt < 1:3374873/100‑1 (MQ=255) cccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCg > 1:5131565/1‑100 (MQ=255) ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGc > 2:3979514/1‑100 (MQ=255) ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGc > 1:3209146/1‑100 (MQ=255) ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGc > 1:1623782/1‑100 (MQ=255) cTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCa > 2:2951189/1‑100 (MQ=255) tCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCaa < 2:50451/100‑1 (MQ=255) cACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAAt > 1:2992211/1‑100 (MQ=255) aCCAACGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTAGTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATg < 1:593621/100‑1 (MQ=255) ccATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATgg > 2:4239177/1‑100 (MQ=255) ccATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATgg > 2:2436684/1‑100 (MQ=255) ccATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGCATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATgg > 2:592635/1‑100 (MQ=255) cATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGc < 2:305868/100‑1 (MQ=255) aTCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCa > 1:4928017/1‑100 (MQ=255) aTCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCa < 2:625719/100‑1 (MQ=255) tCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCAt > 1:3495862/1‑100 (MQ=255) cGTAAAGTGACGGTGACTTTGGAGGATGGTCAGGTATTGAGGATCCGCTTCGATCAGGCGGGGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCAtt < 2:2111205/100‑1 (MQ=255) cGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCAtt > 1:2316397/1‑100 (MQ=255) aaCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACtt < 1:4722082/100‑1 (MQ=255) cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTg < 1:2534750/100‑1 (MQ=255) cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTg < 1:499830/100‑1 (MQ=255) cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTg < 2:2332721/100‑1 (MQ=255) tGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGa > 1:2720490/1‑100 (MQ=255) gACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATTGCAATGGCATTACTTTGAt < 1:3788989/100‑1 (MQ=255) cGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGAttt > 1:811128/1‑100 (MQ=255) cGGTGACTGTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGAttt < 1:1425654/100‑1 (MQ=255) gACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCcgc < 2:3815303/100‑1 (MQ=255) cTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGa > 2:1827883/1‑100 (MQ=255) cTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGa > 1:426059/1‑100 (MQ=255) ttttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGAt < 2:3559096/100‑1 (MQ=255) tttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGTATCGCAATGGCATTACTTTGATTTCCGCGATg < 2:177582/100‑1 (MQ=255) ttGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGa < 2:1499759/100‑1 (MQ=255) gATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGttt < 2:2246861/100‑1 (MQ=255) aTGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttc < 1:1417679/100‑1 (MQ=255) aTGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttc < 2:4390803/100‑1 (MQ=255) aTGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttc < 1:5033412/100‑1 (MQ=255) tGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttct > 1:438711/1‑100 (MQ=255) tgTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctt < 2:4725936/99‑1 (MQ=255) ggTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctt < 2:1075982/100‑1 (MQ=255) cttatggTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctt < 2:2888863/95‑1 (MQ=255) gTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttcttt > 1:2817071/1‑100 (MQ=255) gTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGtttctta > 1:4792781/1‑99 (MQ=255) cAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGCCGTTTCTTTcc < 2:5090598/100‑1 (MQ=255) cAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTcc < 2:162332/100‑1 (MQ=255) cAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTcc > 2:3396469/1‑100 (MQ=255) cAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTcc < 1:2427100/100‑1 (MQ=255) cAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTcc < 2:689784/100‑1 (MQ=255) ggTATTGAAGATCCGCTTCGATCAGGGTATGGGATACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAg < 2:489405/100‑1 (MQ=255) ggTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAg < 2:2423582/100‑1 (MQ=255) ggTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAg < 1:2217961/100‑1 (MQ=255) gTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGt > 2:4172733/1‑100 (MQ=255) gTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGt > 1:2579521/1‑100 (MQ=255) gTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGt < 1:1698422/100‑1 (MQ=255) aTTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTa > 1:5404104/1‑100 (MQ=255) tGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCCGTTAGt > 2:525412/1‑100 (MQ=255) gAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTACAGTTAGTc > 2:4764900/1‑100 (MQ=255) aGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaa > 2:2688522/1‑100 (MQ=255) gATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa > 2:1949887/1‑100 (MQ=255) gATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa > 1:1185182/1‑100 (MQ=255) gATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa > 1:3743544/1‑100 (MQ=255) gATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCaaa > 2:1182020/1‑100 (MQ=255) tCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAGAAt < 1:4290050/100‑1 (MQ=255) tCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAAt > 1:2203625/1‑100 (MQ=255) tCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAAt < 1:5499625/100‑1 (MQ=255) gCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGc > 1:155340/1‑100 (MQ=255) tCGATCAGGGGATGGGCTACTGGCGCAGCAACTTCGCATCGCAAGGGCATTACGTTCAGTTCCGCGATGACGTTTCTTCCCTGGGAGTTCAAATGGCTCa < 2:1269956/100‑1 (MQ=255) cGATCAGGGGATGGGCTACTGGCGCATGAACTTTGCATCGCAATGGCATTACTTTGATTGCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAg < 1:4822089/100‑1 (MQ=255) cGATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAg < 2:4143575/100‑1 (MQ=255) gATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAgg < 2:4484842/100‑1 (MQ=255) gATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAgg < 1:3257146/100‑1 (MQ=255) gATCAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAgg < 2:328223/100‑1 (MQ=255) cAGGGGATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCt > 2:2994897/1‑100 (MQ=255) aGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTg > 2:1561370/1‑100 (MQ=255) gggATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCa > 1:3580621/1‑100 (MQ=255) gggATGGGCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCa < 2:677462/100‑1 (MQ=255) tGGGCTACTGGCGAATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaagga > 1:5574640/1‑100 (MQ=255) ggCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaaggaag > 1:5146696/1‑100 (MQ=255) ggCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaaggaag > 1:641902/1‑100 (MQ=255) ggCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaaggaag > 1:1321224/1‑100 (MQ=255) ggCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGAGTTCCGCGATGACGTTTCTTTCCAGTTCGTCAAAATGGCTCAGGCCGGCaaggaag < 2:3253790/100‑1 (MQ=255) gCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaaggaagg < 2:4847565/100‑1 (MQ=255) gCTACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCaaggaagg < 2:1507562/100‑1 (MQ=255) tACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGa < 1:850308/100‑1 (MQ=255) tACTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGa > 2:5293752/1‑100 (MQ=255) aCTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGaa > 2:1405489/1‑100 (MQ=255) cTGGCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAAt > 2:1097777/1‑100 (MQ=255) ggCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTATTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGt > 1:1963599/1‑100 (MQ=255) ggCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGt < 1:5443923/100‑1 (MQ=255) ggCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGt > 1:1660115/1‑100 (MQ=255) ggCGCATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGt > 1:161973/1‑100 (MQ=255) cgcATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCg > 1:4906506/1‑100 (MQ=255) cgcAGCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCCTTCCAGTTAGGCAAAATGGCTCAGGCGTCCCAGGAAGGGAAtagcg > 2:4676860/1‑96 (MQ=255) gcATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGc > 2:5045913/1‑100 (MQ=255) cATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGcc < 1:915715/100‑1 (MQ=255) cATCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGcc > 1:3964273/1‑100 (MQ=255) aTCAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCa < 1:4349609/100‑1 (MQ=255) cAACTTTGCATCGCAATGGCATTACTTTGATTTCCTCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGTCAAc < 2:4644332/100‑1 (MQ=255) cAACTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAAc > 1:1043522/1‑100 (MQ=255) aaCTTTGCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACa > 2:3473020/1‑100 (MQ=255) | TATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGC > NC_000913/4576615‑4576807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |