| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 576,137 | T→G | pseudogene (689/1040 nt) | nmpC ← | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 576,137 | 0 | T | G | 97.5% | 692.8 / ‑0.8 | 196 | pseudogene (689/1040 nt) | nmpC | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Reads supporting (aligned to +/- strand): ref base T (1/4); new base G (94/97); total (95/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
CTGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGCAGAG > NC_000913/576040‑576235 | ntGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCa > 1:559649/2‑100 (MQ=255)cttggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCa < 1:104463/97‑1 (MQ=255)cTGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCa < 2:4618065/100‑1 (MQ=255)cTGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCa > 2:4481818/1‑100 (MQ=255) tGGGTTTCAGAATAGTTATTGTCCATGTAAATGTTGTTAGCGTCATATTTCAGACCTTCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAg < 2:539194/100‑1 (MQ=255) tGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAg > 1:3868138/1‑100 (MQ=255) tGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAg < 1:2890376/100‑1 (MQ=255) ggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAggg > 2:3682212/1‑99 (MQ=255) ggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGga > 1:4212658/1‑100 (MQ=255) ggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGga < 2:4596014/100‑1 (MQ=255) ttCAGAATAGGTGGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGTCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGgaaga < 2:4103172/100‑1 (MQ=255) ttCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGgaaga > 1:4097788/1‑100 (MQ=255) ttCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGgaaga < 1:2618793/100‑1 (MQ=255) aGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACt > 2:3496941/1‑100 (MQ=255) tAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTcc < 1:3577587/100‑1 (MQ=255) tAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTcc < 1:3725215/100‑1 (MQ=255) tAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTcc < 1:1220057/100‑1 (MQ=255) aGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTccc < 2:2634236/100‑1 (MQ=255) aGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTccc < 1:3103544/100‑1 (MQ=255) ggTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCt < 1:3767015/100‑1 (MQ=255) gTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTg > 1:4873518/1‑100 (MQ=255) gTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTg < 1:772352/100‑1 (MQ=255) gTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTg > 2:513584/1‑100 (MQ=255) tAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGc < 1:4393787/100‑1 (MQ=255) tAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGc < 2:1191984/100‑1 (MQ=255) aGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCa < 2:1819269/100‑1 (MQ=255) gTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCAt > 1:3998596/1‑100 (MQ=255) ggCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCTTTa > 2:634956/1‑100 (MQ=255) ggCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTa > 1:2578254/1‑100 (MQ=255) ggCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCAGTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTa > 1:5106698/1‑100 (MQ=255) gCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTaa > 2:3283357/1‑100 (MQ=255) ccAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAAc > 2:3168757/1‑100 (MQ=255) cAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACt < 2:4426556/100‑1 (MQ=255) aGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGGAAATACTTCAGGAAGAACTTTCCCTGCATTAACtt < 1:5386151/100‑1 (MQ=255) aGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACtt < 2:3222898/100‑1 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACttn < 2:2236959/100‑2 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg < 2:2547722/100‑1 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 2:3961487/1‑100 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 1:4804981/1‑100 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 1:4338398/1‑100 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 2:4321540/1‑100 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg < 1:3429622/100‑1 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 2:4827689/1‑100 (MQ=255) tAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAg < 2:3099252/100‑1 (MQ=255) aaaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAgt < 2:692074/100‑1 (MQ=255) aaTGTTGTTAGCGTCATATCTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCATTAACTTGAgtg < 2:4914490/100‑1 (MQ=255) tgttgtTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTc < 2:1996356/100‑1 (MQ=255) tgttgtTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTc > 2:1324284/1‑100 (MQ=255) ttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCgg < 2:4162442/100‑1 (MQ=255) ttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCgg < 2:1914583/100‑1 (MQ=255) ttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCgg < 1:1409117/100‑1 (MQ=255) gttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAATTTTCCCTGCATTAACTTGAGTGTCGGTa > 2:1527685/1‑100 (MQ=255) tAGCGTCATATTTCAGACCTGCGGCCCACACTTCTGCATTTGTGCCGGATGCAAATACTGCAGGAAGCACTTTCTCTGCATTAGCTTGAGTCTCGGTACg < 2:837995/100‑1 (MQ=255) tAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACg < 2:3623040/100‑1 (MQ=255) gTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCa > 1:1964270/1‑100 (MQ=255) gTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCa > 1:4146821/1‑100 (MQ=255) gTCATATTTCAGACCTGCGGCACAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCa > 2:278166/1‑100 (MQ=255) tCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAg < 1:1135209/100‑1 (MQ=255) cATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGa < 1:2122629/100‑1 (MQ=255) tatTTCAGACCTGCGGCCCAAAGTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAtt > 1:4652849/1‑100 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAttt > 1:3754067/1‑100 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAttt > 1:5145123/1‑100 (MQ=255) tCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGc < 2:553078/100‑1 (MQ=255) tCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGc > 2:3043869/1‑100 (MQ=255) tCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGc < 1:3198329/100‑1 (MQ=255) aGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCan < 1:224758/100‑2 (MQ=255) aGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCAt > 2:4927983/1‑100 (MQ=255) aGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCAt > 2:159184/1‑100 (MQ=255) aGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCAt < 1:4158813/100‑1 (MQ=255) gACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATa > 1:1166755/1‑100 (MQ=255) gACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATa < 1:2632716/100‑1 (MQ=255) ccTGCGGCCCAAACTTCTGTATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAATTTGATTGTCGGTACGATCAGATTTCGCACAAg > 2:5035373/1‑100 (MQ=255) cTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGt > 2:338683/1‑100 (MQ=255) tGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGtt > 1:1580281/1‑100 (MQ=255) ggCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCa < 1:1833994/100‑1 (MQ=255) cccAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTCGTGTGTCGGTACGATCAGATTTCGCATAAGTTGCAcc < 2:5370901/100‑1 (MQ=255) cccAAACTTCTGCATTATTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCAcc > 2:5318236/1‑100 (MQ=255) ccAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGTACCg > 1:2654052/1‑100 (MQ=255) aaaCTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGAt < 1:4896584/100‑1 (MQ=255) cTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATAcc < 2:2067601/100‑1 (MQ=255) cTGCATTTTTACCGGAAGCAAATCCTGCAGGAAGAACTTTCACTGCATTAACTTGAGTGTAGGTACGATCAGATTTCGCATAAGTTGCACCGATACTGaa > 2:2087145/1‑100 (MQ=255) tGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAAt < 2:3832741/100‑1 (MQ=255) cATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATcc > 2:1687105/1‑100 (MQ=255) cATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATcc < 1:4257241/100‑1 (MQ=255) ttttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTc > 1:5007425/1‑100 (MQ=255) tttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCg < 1:3970172/100‑1 (MQ=255) tACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTa < 1:3952010/100‑1 (MQ=255) ccGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAtt > 2:1743287/1‑100 (MQ=255) ccGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAtt > 1:5035466/1‑100 (MQ=255) ccGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAtt > 1:950156/1‑100 (MQ=255) cGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTc < 2:119763/100‑1 (MQ=255) cGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTc < 2:3446636/100‑1 (MQ=255) ggAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCa > 2:2615766/1‑100 (MQ=255) ggAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCa > 1:617360/1‑100 (MQ=255) aaGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATa < 2:2388860/100‑1 (MQ=255) cAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGt < 1:470251/100‑1 (MQ=255) cAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGt > 2:654740/1‑100 (MQ=255) aaTACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAg < 1:3722054/100‑1 (MQ=255) tACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGCa > 1:991225/1‑100 (MQ=255) ttCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGCagag > 1:1359172/1‑100 (MQ=255) | CTGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGCAGAG > NC_000913/576040‑576235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |