| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 585,035 | T→C | Y200C (TAC→TGC) | ompT ← | DLP12 prophage; outer membrane protease VII; outer membrane protein 3b |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 585,035 | 0 | T | C | 98.9% | 983.8 / ‑1.7 | 282 | Y200C (TAC→TGC) | ompT | DLP12 prophage; outer membrane protease VII; outer membrane protein 3b |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (137/141); total (139/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
GTGTTCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGTAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGATAT > NC_000913/584938‑585131 | gtTCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAggg > 2:669048/1‑100 (MQ=255) gtTCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAggg > 2:3574926/1‑100 (MQ=255) gtTCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAggg > 1:1999208/1‑100 (MQ=255) ttCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGc < 1:4343516/100‑1 (MQ=255) cATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCAt > 2:1644816/1‑100 (MQ=255) tCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCCATGCAGGGCAttt < 1:4911125/100‑1 (MQ=255) cGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCAtttt > 2:2902172/1‑100 (MQ=255) tATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTaaa < 1:5410714/100‑1 (MQ=255) aTCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTaaaa > 1:944795/1‑100 (MQ=255) tCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAAc > 1:2925161/1‑100 (MQ=255) tCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAAc < 2:1062133/100‑1 (MQ=255) aGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACgt < 1:2250078/100‑1 (MQ=255) gatgatTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACgtt > 1:3824155/1‑100 (MQ=255) gatgatTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACgtt > 1:2556748/1‑100 (MQ=255) atgatTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACgttg < 1:4406805/100‑1 (MQ=255) ttCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGttgtttg < 2:1194799/100‑1 (MQ=255) tCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGttgtttga < 2:3330602/100‑2 (MQ=255) cccAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGcc < 1:1664579/100‑1 (MQ=255) aGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGAt < 1:1302163/100‑1 (MQ=255) ccGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTg > 2:373405/1‑100 (MQ=255) cGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGTAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGc < 1:1540838/100‑1 (MQ=255) cGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGc < 1:1873719/100‑1 (MQ=255) cGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGc < 1:3267498/100‑1 (MQ=255) cGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACCTTGTTTGTAGCCGATTGc < 2:768003/100‑1 (MQ=255) gCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGct < 1:148052/100‑1 (MQ=255) gCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGct > 1:1094786/1‑100 (MQ=255) gCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGct > 1:4184106/1‑100 (MQ=255) cTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGctc < 1:3314495/100‑1 (MQ=255) aTTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTtc > 1:82003/1‑100 (MQ=255) aTTTAAATGTGCCACCGAGTTCAAAATCGTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTtc < 2:2749106/100‑1 (MQ=255) tttAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTtct > 1:2747812/1‑100 (MQ=255) tAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTcc < 1:123747/100‑1 (MQ=255) tAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTcc < 1:1257998/100‑1 (MQ=255) tAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTcc < 2:2057076/100‑1 (MQ=255) tAAAGGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCCGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTcc < 1:241016/100‑1 (MQ=255) aTGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCAtt > 2:92634/1‑100 (MQ=255) gtgCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCg > 1:4082287/1‑100 (MQ=255) gtgCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCg < 1:3601530/100‑1 (MQ=255) tgCCACCGAGTTCAGAATCTTCATAAGGATAACTTCCAGTCAAGCCAGTGCAGGCCATTTTAAAACGTTGTTTGTAGCCGATTGCTATTTCTCCGTTCgg > 2:5129324/1‑100 (MQ=255) tgCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCgg < 2:3059778/100‑1 (MQ=255) tgCCACCGAGTTCAAAATCCTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCACGTCAAAACCATGTTTCTAGCCGATCGCTCTTTCTCCATTAgg > 2:4742035/1‑100 (MQ=255) tccACCGAGATCAAAATCTTCATAACGATAGCTTCGAGTCAAGCCAATGCAGGACATTTTAAAACTTTTTTTTTAGTTGATTGCTCTTTTTCCTTTCggt > 2:1352857/2‑99 (MQ=255) gCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTTTTTGTAGCCGATTGCTCTTTCTCCATTCggg > 2:4375594/1‑100 (MQ=255) ccACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGa < 1:3192852/100‑1 (MQ=255) cACCTAGTTCAAAATCTTCATAACGATAACTTCCAGTTACGCAAATGCAGGGCACTTTAATCCGTGGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGaa < 2:1835581/100‑1 (MQ=255) cACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGaa > 2:2403925/1‑100 (MQ=255) aCCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAg < 2:1770864/100‑1 (MQ=255) aCCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAg < 2:2119523/100‑1 (MQ=255) ccGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAgg > 1:1754303/1‑100 (MQ=255) ccGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGACATTTTAAAACGATGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAga > 2:3415681/1‑99 (MQ=255) ttaaaaTCTTCAGAACGATAACTTAGAAACAAGCCAACGGAGGGAAATTTAAAACGTTGTTTATAGACGGTTGATATTTCTCCATTCGGGAAGAAGCCGa > 2:2611677/3‑100 (MQ=255) tCAAAATCTTCATAACGATAACTTCCCGTCAAGCCAATGCAGGGCCTTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGa > 2:3992554/1‑100 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCGATTCGGGAAGGAGCCGat < 1:4636373/100‑1 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGat > 1:812516/1‑100 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGat < 1:104164/100‑1 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGat < 2:376446/100‑1 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGat > 2:2209729/1‑100 (MQ=255) cAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGat < 2:2574114/100‑1 (MQ=255) aaaaTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGata > 1:1967865/1‑100 (MQ=255) aaaaTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGata < 1:4208562/100‑1 (MQ=255) aaaTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGatat > 1:3551317/1‑100 (MQ=255) aaTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATatc < 2:5248596/100‑1 (MQ=255) aTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATatca > 1:4086681/1‑100 (MQ=255) aTCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATatca > 2:1122737/1‑100 (MQ=255) tCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATatcat < 1:395443/100‑1 (MQ=255) tCTTCATAACGATAACTTCCAGTCAAGCCAATGCAGCGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGTAAGGAGCAGatgttat > 2:1220797/1‑95 (MQ=255) cATAACGATAACTTCCAGTCAAGCCAATGTAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATctct > 1:3791012/1‑100 (MQ=255) cATAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATctct < 1:527571/100‑1 (MQ=255) tAACGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGa > 2:3238749/1‑100 (MQ=255) aaCGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGaa < 1:5217913/100‑1 (MQ=255) aCGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAAt < 1:2152760/100‑1 (MQ=255) aCGATAACTTCCAGTCAAGCCAATGCAGGGCATTGTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAAt < 1:3098484/100‑1 (MQ=255) cGATAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATc < 2:4015453/100‑1 (MQ=255) aTAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTGGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATccc < 1:2452126/100‑1 (MQ=255) aTAACTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATccc < 2:5332901/100‑1 (MQ=255) aCTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCcctcc > 1:5486583/1‑100 (MQ=255) aCTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCcctcc < 2:149714/100‑1 (MQ=255) aCTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCcctcc > 2:419300/1‑100 (MQ=255) cTTCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCcctcct < 2:4919700/100‑1 (MQ=255) ttCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCctcctc < 1:756863/100‑1 (MQ=255) ttCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCctcctc > 1:170680/1‑100 (MQ=255) tCCAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCa > 1:3466034/1‑100 (MQ=255) cAGTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGa > 1:2395466/1‑100 (MQ=255) gTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAAc < 2:4627014/100‑1 (MQ=255) gTCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAAc < 1:1138414/100‑1 (MQ=255) tCAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACt < 2:2340926/100‑1 (MQ=255) cAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTg < 2:569940/100‑1 (MQ=255) cAAGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTg > 2:300345/1‑100 (MQ=255) aGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTa < 1:2617642/100‑1 (MQ=255) aGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTa > 2:4294001/1‑100 (MQ=255) aGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTa > 2:1976744/1‑100 (MQ=255) aGCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTa < 1:911671/100‑1 (MQ=255) gCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAg < 1:5147435/100‑1 (MQ=255) gCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAg < 1:603199/100‑1 (MQ=255) gCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAg < 2:1934712/100‑1 (MQ=255) gCCAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTGCTCCATTCGGGAAGGAGCTGATATCATCTCTGAATCCCTCCTCAGAACTGTAg < 2:5080359/100‑1 (MQ=255) ccAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGa < 2:5383343/100‑1 (MQ=255) cAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGat > 1:4776248/1‑100 (MQ=255) cAATGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGat < 2:2217270/100‑1 (MQ=255) aTGCAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGatat > 2:1598799/1‑100 (MQ=255) | GTGTTCATCGTTATCAGATGATTCCACCCAGCCGCTGTATTTAAATGTGCCACCGAGTTCAAAATCTTCATAACGATAACTTCCAGTCAAGCCAATGTAGGGCATTTTAAAACGTTGTTTGTAGCCGATTGCTCTTTCTCCATTCGGGAAGGAGCCGATATCATCTCTGAATCCCTCCTCAGAACTGTAGATAT > NC_000913/584938‑585131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |