| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,048,134 | A→C | N186K (AAT→AAG) | gfcC ← | putative O‑antigen capsule production periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,048,134 | 0 | A | C | 97.2% | 724.9 / 4.5 | 213 | N186K (AAT→AAG) | gfcC | putative O‑antigen capsule production periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base A (3/3); new base C (108/97); total (112/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
AAAGCTGGCTGCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTATTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCGCA > NC_000913/1048037‑1048230 | aaGCTGGCTGCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGttcttc < 1:1258638/100‑1 (MQ=255) aGCTGGCTGCCTGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTtcttct < 1:4911124/100‑1 (MQ=255) aGCTGGCTGCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTtcttct < 1:4987675/100‑1 (MQ=255) aGCTGGCTGCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTtcttct < 2:406737/100‑1 (MQ=255) gctgCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTcc < 1:4237506/100‑1 (MQ=255) gctgCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTcc > 2:4520441/1‑100 (MQ=255) tgCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCcgc < 1:2513653/100‑1 (MQ=255) tgCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTATTCTTGTCcgc > 2:2401445/1‑100 (MQ=255) gCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCcgcg > 2:4521429/1‑100 (MQ=255) gCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCcgcg > 2:5190307/1‑100 (MQ=255) cAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGcc > 1:3786899/1‑100 (MQ=255) cAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGcc > 1:3344334/1‑100 (MQ=255) cAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGcc < 2:2243696/100‑1 (MQ=255) cAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGcc > 1:2187762/1‑100 (MQ=255) aGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGTCGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTGCGCGCCt > 2:5112960/1‑100 (MQ=255) aGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCt < 1:1935952/100‑1 (MQ=255) cGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCa < 2:398184/100‑1 (MQ=255) ggtggtTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCaa > 1:4606358/1‑100 (MQ=255) ggtggtTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCaa > 2:1053062/1‑100 (MQ=255) tggtTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAgg < 2:4493470/100‑1 (MQ=255) tCCACATGTCTTTTATTCCACAGTGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggg > 2:1144795/1‑100 (MQ=255) tCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggg < 2:3237390/100‑1 (MQ=255) tCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggg < 2:514210/100‑1 (MQ=255) tCCACATAACTTTTATTCCACAGGACAACACGCGCCACGACAGTCACACCCTCATCCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggt < 2:1320374/100‑2 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg < 1:200229/100‑1 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg < 2:2102244/100‑1 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg < 2:1364354/100‑1 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg > 2:4596437/1‑100 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg < 1:4374548/100‑1 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg < 2:595286/100‑1 (MQ=255) cacaTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCggggg > 1:5206287/1‑100 (MQ=255) caTGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTg < 2:1009671/100‑1 (MQ=255) caTGTCTTTTAGTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTCATCAACGTAAAGTTCTTCTTGTCCGCGACTGCATGGCgggtctg > 2:2580872/1‑96 (MQ=255) tGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGAt > 2:3436437/1‑100 (MQ=255) gTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATc < 2:3367112/100‑1 (MQ=255) cTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCtt > 1:654524/1‑100 (MQ=255) cTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCtt > 2:919862/1‑100 (MQ=255) cTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCtt > 1:2412373/1‑100 (MQ=255) cTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCtt > 1:1532735/1‑100 (MQ=255) ttttATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTg > 2:1944942/1‑100 (MQ=255) tttATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGc < 2:3921002/100‑1 (MQ=255) ttATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCa > 1:5160698/1‑100 (MQ=255) ttATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCa < 2:3498385/100‑1 (MQ=255) tATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCan < 1:4443835/100‑2 (MQ=255) aTTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGCGATCTTGCAGa > 2:4393003/1‑100 (MQ=255) ttCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGAt < 1:4879251/100‑1 (MQ=255) ccACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGNCTGCAAGACGGGGNTGATCTTGCAGATaa > 2:2448151/1‑100 (MQ=255) ccACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATaa > 1:2598347/1‑100 (MQ=255) ccACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATaa > 1:875938/1‑100 (MQ=255) ccACAAGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATaa > 2:4836674/1‑100 (MQ=255) acaGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATc > 2:3609849/1‑100 (MQ=255) gggCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGt > 2:2940376/1‑100 (MQ=255) gggCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGt < 1:1740527/100‑1 (MQ=255) gggCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTACTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGt > 2:4981443/1‑100 (MQ=255) ggCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTa < 1:3037028/100‑1 (MQ=255) cAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCt > 2:5364328/1‑100 (MQ=255) cAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCt > 1:5233433/1‑100 (MQ=255) ggggCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTAc > 1:3227882/1‑100 (MQ=255) gggCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACg < 1:3538029/100‑1 (MQ=255) gggCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACg > 2:4215634/1‑100 (MQ=255) cgacgaCAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGgcc < 2:4240139/100‑1 (MQ=255) cgacAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGgcctgc > 1:1860251/1‑100 (MQ=255) gacAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGgcctgcc > 1:3964615/1‑100 (MQ=255) gacAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGgcctgcc < 1:5084832/100‑1 (MQ=255) gacAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGgcctgcc < 1:803156/100‑1 (MQ=255) cAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGcctgcctg < 2:2175488/100‑1 (MQ=255) cAGTCTCACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGcctgcctg < 1:1442997/100‑1 (MQ=255) cAGTCTCACCCACAGTCGTAAACACCGTAACAGCGGTCTGATCCGCGCCTGCAAGGCTGGCGGGAGCAGGCAGGTAATCGCTAACGCTACGGcctgcctg > 2:4154368/1‑100 (MQ=255) aGTCTCTCCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCctgcctgc < 2:433814/100‑1 (MQ=255) ctcACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAg > 1:1610198/1‑100 (MQ=255) ctcACCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAg < 1:4234914/100‑1 (MQ=255) cACCCTCAGGCGTAATCACCATAACGTTATTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAggg > 1:2966546/1‑100 (MQ=255) aCCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGc < 1:2197571/100‑1 (MQ=255) aCCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGc < 1:2819578/100‑1 (MQ=255) aCCCTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGc < 2:1284069/100‑1 (MQ=255) cccTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCa > 2:304805/1‑100 (MQ=255) cccTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCa > 2:3711082/1‑100 (MQ=255) cTCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAAt > 2:4803919/1‑100 (MQ=255) cTCAGGCGTAATCACCATAACGTTCTTCTTGGCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAAt < 2:2505304/100‑1 (MQ=255) tCAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAAtt < 1:2874482/100‑1 (MQ=255) cAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTg > 2:2838613/1‑100 (MQ=255) cAGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTg > 2:1541667/1‑100 (MQ=255) aGGCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGc > 2:3596907/1‑100 (MQ=255) ggCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCCGGGCAATTGcc < 2:2984680/100‑1 (MQ=255) ggCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGcc > 1:1057335/1‑100 (MQ=255) ggCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGcc > 2:2572068/1‑100 (MQ=255) ggCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGcc > 2:1916939/1‑100 (MQ=255) gCGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGCTAACGCTACGGCCTGCCTGCCAGGGCAATTGccc < 2:5084845/100‑1 (MQ=255) cGTAATCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCg > 2:1327663/1‑100 (MQ=255) aTCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGccc < 1:965944/100‑1 (MQ=255) tCACCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGcccc > 1:3651246/1‑100 (MQ=255) cACCATAACGTTCTTCTTGTCCGCTCCTTCAAGGCGGTGTTGATCTTGCTGTTTATCTGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCa > 2:2554319/1‑100 (MQ=255) aCCATAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAg < 1:1309851/100‑1 (MQ=255) aTAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGaaa < 2:3144594/100‑1 (MQ=255) aTAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGaaa > 1:4540255/1‑100 (MQ=255) tAACGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAAc < 2:4460518/100‑1 (MQ=255) aCGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCg < 2:3257978/100‑1 (MQ=255) aCGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCg > 1:1801668/1‑100 (MQ=255) aCGTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCg < 1:3272723/100‑1 (MQ=255) gTTCTTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCGCa > 1:4546883/1‑100 (MQ=255) | AAAGCTGGCTGCCAGGCGGTGGTTCCACATGTCTTTTATTCCACAGGGCAACAGGGGCGACGACAGTCTCACCCTCAGGCGTAATCACCATAACGTTATTCTTGTCCGCGCCTGCAAGGCGGGGGTGATCTTGCAGATAATCGGTAACGCTACGGCCTGCCTGCCAGGGCAATTGCCCGGCCCCAGAAACCGCA > NC_000913/1048037‑1048230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |