| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,068,370 | T→G | intergenic (+116/+141) | ymdF → / ← rutG | KGG family protein/pyrimidine permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,068,370 | 0 | T | G | 99.5% | 643.3 / NA | 182 | intergenic (+116/+141) | ymdF/rutG | KGG family protein/pyrimidine permease |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base G (96/84); minor base A (0/1); total (96/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
AATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTAC > NC_000913/1068273‑1068466 | aaTGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTa < 2:686384/100‑1 (MQ=255)aaTGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTa < 2:2400331/100‑1 (MQ=255)aaTGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTa < 2:4735944/100‑1 (MQ=255) aTGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTAt > 1:4543780/1‑100 (MQ=255) tGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATc < 2:653543/100‑1 (MQ=255) gCATTTTTGTCTGTAGCTCGTCAAAAAGCCTTCGCCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCa < 2:4207941/100‑1 (MQ=255) gCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCa < 2:2174333/100‑1 (MQ=255) cATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAg > 1:415234/1‑100 (MQ=255) cATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTGACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAg < 1:161049/100‑1 (MQ=255) aTTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAgg > 1:5528714/1‑100 (MQ=255) tttttGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGc < 2:969310/100‑1 (MQ=255) tttttGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGc < 1:293008/100‑1 (MQ=255) gttttGTGTGTAGTTCGTCAAAAACCCATCACCGCAGGTGACCCGGTGGTTGATACTGATGATAAATATAAGGATGCCTGCTGCGCTATGCGTATCGGGc < 2:3733363/99‑1 (MQ=255) gTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTAcc < 1:5452452/100‑1 (MQ=255) gTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTAcc > 2:3803922/1‑100 (MQ=255) tCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCa < 2:2002174/100‑1 (MQ=255) aGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCagaaga > 1:5395417/1‑100 (MQ=255) tCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTg > 1:264477/1‑100 (MQ=255) tCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTg < 1:4739756/100‑1 (MQ=255) cGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGc > 2:2115397/1‑100 (MQ=255) cGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGc < 1:5459034/100‑1 (MQ=255) gTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCa > 2:3518344/1‑100 (MQ=255) gTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCa < 2:1582278/100‑1 (MQ=255) gTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCa > 1:4975738/1‑100 (MQ=255) tCAAAAAGCCATCACCGCCGGTTAGCCGGCGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCaa > 1:5189904/1‑100 (MQ=255) tCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCaa < 2:2727278/100‑1 (MQ=255) cAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAat < 1:1274876/100‑1 (MQ=255) cAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAat > 2:3684107/1‑100 (MQ=255) aaaaaGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAata > 1:2277308/1‑100 (MQ=255) aaaaGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAatat > 2:4872766/1‑100 (MQ=255) aaaaGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAatat > 2:4872825/1‑100 (MQ=255) ccATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGa < 2:4475814/100‑1 (MQ=255) ccATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGa > 1:1788855/1‑100 (MQ=255) ccATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGa > 2:3971198/1‑100 (MQ=255) cATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGaa > 1:1155855/1‑100 (MQ=255) aTCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAAt < 2:2529853/100‑1 (MQ=255) tCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAAtt < 2:1386031/100‑1 (MQ=255) cACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt > 1:31898/1‑100 (MQ=255) acggtcgGTTACCGGCGGGTTGCTACTGATGACAAAGGTAGGCGTGCGTGAGGCGCGATGCGTAGCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 2:4474188/95‑1 (MQ=19) ccgccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGc > 1:635668/1‑100 (MQ=255) gccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 2:2237844/100‑1 (MQ=255) gccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 2:5322713/100‑1 (MQ=255) gccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc > 1:2817106/1‑100 (MQ=255) gccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 2:3281851/100‑1 (MQ=255) cgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTg > 1:3731184/1‑100 (MQ=255) ggTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGCCATACCAGAAGATTGCAATATATTGAATTTGCACTGt < 2:793308/100‑1 (MQ=255) cccGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGt > 1:484191/1‑100 (MQ=255) cccGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTCATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGt < 2:2450104/100‑1 (MQ=255) cGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAg < 2:1834011/100‑1 (MQ=255) ggtggtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAgg < 2:4280458/100‑1 (MQ=255) gtggtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGc > 1:2058956/1‑100 (MQ=255) ggtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCg > 1:3739151/1‑100 (MQ=255) gtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCgg < 1:709540/100‑1 (MQ=255) gtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCgg < 2:2084783/100‑1 (MQ=255) tGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATCTTGAATTTGCACTGTTTTGTAGGCCggct > 1:5089904/1‑98 (MQ=255) aTACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATaa < 1:3717280/100‑1 (MQ=255) tACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAg > 2:1958333/1‑100 (MQ=255) cTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGc > 2:1177083/1‑100 (MQ=255) cTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGc > 1:3805266/1‑100 (MQ=255) tgatgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCg > 1:4070377/1‑100 (MQ=255) tgatgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCg < 2:263662/100‑1 (MQ=255) gatgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGt > 1:4381804/1‑100 (MQ=255) tgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGttt > 2:4964284/1‑100 (MQ=255) tgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGttt > 1:1056879/1‑100 (MQ=255) tgaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGttt > 1:3979624/1‑100 (MQ=255) gaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTa > 2:1855514/1‑100 (MQ=255) gaCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTa > 1:3878663/1‑100 (MQ=255) aCAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGAGTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTAc < 1:5292319/100‑1 (MQ=255) cAAATGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTAcg > 1:524074/1‑100 (MQ=255) aaaTGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCGGGATAAGGCGTTTAcgc < 2:2657493/100‑1 (MQ=255) aaTGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCGATACATTGAATTTGCACTGTTTTGTAGGCCGGATAACGCGTTTAcgcc < 1:4887148/100‑1 (MQ=25) aaTGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTAcgcc < 1:1816851/100‑1 (MQ=255) aaTGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTAcgcc < 1:3551183/100‑1 (MQ=255) aTGTAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTAcgccg < 2:5332935/100‑1 (MQ=255) tAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCAt > 1:1033070/1‑100 (MQ=255) tAAGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCAt > 2:1571724/1‑100 (MQ=255) aGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 1:2225135/100‑1 (MQ=255) aGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 1:3044937/100‑1 (MQ=255) aGCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc > 2:1738186/1‑100 (MQ=255) gCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg > 2:318020/1‑100 (MQ=255) gCTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg > 2:5088733/1‑100 (MQ=255) gCTTGCCTGAAGCGCGATGCGTATCAGGCCTACCAGAATATTACAATATAATGGATTTGCACTGTTGTGTAGCCGGGATAAGGCGCTTACTCCGCATCCg > 2:835327/1‑100 (MQ=21) cTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg > 2:464443/1‑100 (MQ=255) cTTGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg > 1:2529273/1‑100 (MQ=255) cTTGCCTGATGCGCGATGCGTATCAGGCATACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCTGGATATGGCGTTTACGCCGCAttcag > 2:145431/1‑96 (MQ=18) ttGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 1:3015801/100‑1 (MQ=255) ttGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 1:2137838/100‑1 (MQ=255) tGCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa > 1:3281317/1‑100 (MQ=255) gCCTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt > 2:5191746/1‑100 (MQ=255) ccTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGTAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg < 1:5330913/100‑1 (MQ=255) ccTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg < 2:3770349/100‑1 (MQ=255) cTGATGCGCGATGCGTATCAGGCCTACCGGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGa < 1:5058774/100‑1 (MQ=255) cTGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGa > 2:3392293/1‑100 (MQ=255) tGATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTTGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGaa > 2:3017442/1‑100 (MQ=255) gATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAc < 2:480535/100‑1 (MQ=255) gATGCGCGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAc < 1:813107/100‑1 (MQ=255) gcgcGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAAt < 2:3441257/100‑1 (MQ=255) gcgcGATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAAt < 1:3077478/100‑1 (MQ=255) cgcgATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATg < 2:4103361/100‑1 (MQ=255) gcgATGCGTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGc < 1:4299497/100‑1 (MQ=255) | AATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTAC > NC_000913/1068273‑1068466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |