| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,134,118 | A→C | Q106P (CAG→CCG) | flgF → | flagellar component of cell‑proximal portion of basal‑body rod |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,134,118 | 0 | A | C | 98.0% | 697.9 / 0.6 | 198 | Q106P (CAG→CCG) | flgF | flagellar component of cell‑proximal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base C (84/110); total (85/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
ACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTGC > NC_000913/1134021‑1134214 | acCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCgg < 2:3058044/100‑1 (MQ=255) tCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTg < 1:3890145/100‑1 (MQ=255) cgcgCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGa > 1:5486867/1‑100 (MQ=255) cgcgCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGa > 1:284199/1‑100 (MQ=255) gcgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGAt < 1:5370774/100‑1 (MQ=255) gcgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGAt > 1:694166/1‑100 (MQ=255) gcgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGAt < 1:2324484/100‑1 (MQ=255) gcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATcc < 1:373938/100‑1 (MQ=255) cGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCAc > 2:1703447/1‑100 (MQ=255) gCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCAcc < 2:4612660/100‑1 (MQ=255) ggACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCggg < 2:163825/100‑1 (MQ=255) gACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGc < 2:1530292/100‑1 (MQ=255) gACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGc < 1:2851587/100‑1 (MQ=255) aCGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCa < 1:2120979/100‑1 (MQ=255) aCGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCa < 1:4126241/100‑1 (MQ=255) aCGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCa > 1:2615575/1‑100 (MQ=255) gTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAAc > 1:857386/1‑100 (MQ=255) tCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACt > 2:3530477/1‑100 (MQ=255) cgcgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTg > 2:4334342/1‑100 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc < 2:126285/100‑1 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc < 2:4242617/100‑1 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc > 2:1144220/1‑100 (MQ=255) gTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACa > 2:5364076/1‑100 (MQ=255) ttGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACaa < 2:2740496/100‑1 (MQ=255) tGCAGCAGGATGGCTGACTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAAt < 1:4579760/100‑1 (MQ=255) gcagcaGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAAtt < 2:5393397/100‑1 (MQ=255) cagcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACGATTc < 1:3158278/100‑1 (MQ=255) cagcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTc < 1:2938988/100‑1 (MQ=255) cagcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTc < 1:574840/100‑1 (MQ=255) agcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCa < 2:2498971/100‑1 (MQ=255) agGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGTAACTGACGATTCAggg < 2:5322703/100‑1 (MQ=255) agGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAggg > 1:3894100/1‑100 (MQ=255) gATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGc < 2:2842148/100‑1 (MQ=255) gctggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATcc > 1:2350264/1‑100 (MQ=255) tggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCgg < 1:3359512/100‑1 (MQ=255) ggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGt > 2:740215/1‑100 (MQ=255) ggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGt < 1:5313029/100‑1 (MQ=255) ggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGt < 2:5286458/100‑1 (MQ=255) ctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGa < 1:5042876/100‑1 (MQ=255) ctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGa > 1:515362/1‑100 (MQ=255) ctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGa > 1:516513/1‑100 (MQ=255) tggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCCGTGAt < 2:4841841/100‑1 (MQ=255) gcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAg < 1:5095792/100‑1 (MQ=255) ncGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAgg > 1:4165820/2‑100 (MQ=255) tGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGa < 1:1484156/100‑1 (MQ=255) gCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAg < 1:2153900/100‑1 (MQ=255) cAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAgg > 2:4716093/1‑100 (MQ=255) aGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGc < 1:749776/100‑1 (MQ=255) gACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCt > 2:927429/1‑100 (MQ=255) gACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCt > 1:3640618/1‑100 (MQ=255) ccGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTgg > 2:5118863/1‑100 (MQ=255) ccGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTgg > 1:4711379/1‑100 (MQ=255) ccGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTgg > 2:1491967/1‑100 (MQ=255) ccGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTgg > 2:1285416/1‑100 (MQ=255) cGCTGACGGCAGTGAAGTGTAAAGGCGTAATGGCAGCATTCAGGTTGATCCCACCGGTCAACTGACACGTCAGGGGCATCCGGTGATAGGCGAGGCTggc < 2:834715/100‑2 (MQ=255) cGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTggg < 1:1180733/100‑1 (MQ=255) gCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGc < 2:4563599/100‑1 (MQ=255) cTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGcc < 2:1134685/100‑1 (MQ=255) gACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCCTCCGGTGATAGGCGAGGCTGGGCCaa > 1:4060322/1‑100 (MQ=255) gACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCag > 2:2618115/1‑99 (MQ=255) aCGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAt > 1:4347577/1‑100 (MQ=255) aCGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAt < 1:2643779/100‑1 (MQ=255) cGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAtt > 2:615014/1‑100 (MQ=255) cGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAtt > 1:178430/1‑100 (MQ=255) cGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAtt > 2:3136662/1‑100 (MQ=255) gCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGc > 1:2672192/1‑100 (MQ=255) gCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGc < 1:3291723/100‑1 (MQ=255) gCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGc < 2:730344/100‑1 (MQ=255) cAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCt > 2:3844433/1‑100 (MQ=255) aGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtg > 1:474727/1‑100 (MQ=255) aGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtg > 1:3162695/1‑100 (MQ=255) cGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtgtn < 1:4423673/100‑2 (MQ=255) cGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtgtg > 1:5291667/1‑100 (MQ=255) cGAAGGGTACACGCGTGATGGCAGCGTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGTTAGGCGAGGCTGGGCCAATTGCtgtg < 2:2042855/100‑1 (MQ=255) gAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGc > 2:3419644/1‑100 (MQ=255) aaGGGTATACGCGACATGGCAGCATCCCGGTTGATCCAACCGGGAAACTGACCATTCAGGGGCATCCGGTGATAGGCGAGGCTGCGCCAATTGCTGTGcc < 2:1363957/100‑1 (MQ=255) aGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCg < 2:1453558/100‑1 (MQ=255) gggTATACGCGTAATGGTAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCGATTGCTGTGCCgg > 1:145749/1‑100 (MQ=255) ggTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGa > 2:4073662/1‑100 (MQ=255) ggTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGa > 1:2053969/1‑100 (MQ=255) tataCGCGTAATGGCAGCATTCCGGTTGATCCCACGGGGCGACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCGCTTGCTGTGCCGGAAg > 2:1042487/1‑100 (MQ=255) tataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAg < 1:1317775/100‑1 (MQ=255) tataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGCGCCAATTGCTGTGCCGGAAg < 2:3720267/100‑1 (MQ=255) ataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCGACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgg > 1:4863136/1‑100 (MQ=255) ataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgg > 1:3106385/1‑100 (MQ=255) ataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgg < 2:509579/100‑1 (MQ=255) aCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgggg < 1:1977062/100‑1 (MQ=255) cgcgTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGc < 1:605141/100‑1 (MQ=255) cgcgTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGACTGGGCCAATTGCTGTGCCGGAAGGGGc > 1:1334516/1‑100 (MQ=255) ggCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGGAGGGGCGGAAATCa > 2:2265520/1‑100 (MQ=255) ggCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCa > 2:1838813/1‑100 (MQ=255) ggCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCa > 1:1030153/1‑100 (MQ=255) gcagcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCAc < 1:1026197/100‑1 (MQ=255) gcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTAt > 2:1958597/1‑100 (MQ=255) caTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTAtt < 1:2198074/100‑1 (MQ=255) caTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTAtt < 2:2590035/100‑1 (MQ=255) aTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATtg > 1:23678/1‑100 (MQ=255) aTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATtg < 1:3558460/100‑1 (MQ=255) ttCCGGTTGATCNCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATtgc < 1:4929736/100‑1 (MQ=255) ttCCGGTTGATCCCACCGGGCAACTGACAATTCAGAGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATtgc < 2:4632705/100‑1 (MQ=255) | ACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTGC > NC_000913/1134021‑1134214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |