| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,139,916 | T→G | D513E (GAT→GAG) | flgK → | flagellar hook‑filament junction protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,139,916 | 0 | T | G | 98.8% | 600.1 / ‑2.2 | 169 | D513E (GAT→GAG) | flgK | flagellar hook‑filament junction protein 1 |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base G (81/86); total (83/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
ATAAAACCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGATGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAC > NC_000913/1139819‑1140012 | taaAACCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCgaggag > 2:2578040/1‑100 (MQ=255) aaaaCCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGaggagg < 1:656224/100‑1 (MQ=255) aaaaCCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGaggagg < 2:298809/100‑1 (MQ=255) aaaCCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAggagga < 2:4438605/100‑1 (MQ=255) aCCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAggaggaat < 2:2735725/100‑3 (MQ=255) ccGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTa < 1:2603511/100‑1 (MQ=255) cgcgACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTAc > 2:2339024/1‑100 (MQ=255) gcgACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACg > 1:4881481/1‑100 (MQ=255) gcgACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACg > 1:1987886/1‑100 (MQ=255) gACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGa < 2:3143262/100‑1 (MQ=255) cGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGaaa < 2:4120240/100‑1 (MQ=255) cGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGaaa > 1:4251589/1‑100 (MQ=255) ttGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATc < 1:1685660/100‑1 (MQ=255) ttGAAAACCAGAAGCGCCACGCAAGGTAATGTGTTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTAAATCTCGAGGAGGAGTACGGAAATc < 2:3890219/100‑1 (MQ=255) tGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCt > 2:2843332/1‑100 (MQ=255) gAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTg < 2:2390833/100‑1 (MQ=255) aaaaCCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGc < 2:1798544/100‑1 (MQ=255) aaaCCAGTAGCGCCACGCAAGGTAGTGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCa > 1:241753/1‑100 (MQ=255) aaaCCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCa < 1:1344115/100‑1 (MQ=255) aaCCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCaa < 1:4833624/100‑1 (MQ=255) cAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGt < 1:1063195/100‑1 (MQ=255) aGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTc < 1:3086192/100‑1 (MQ=255) aGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTc > 1:1577207/1‑100 (MQ=255) aGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTc > 1:994009/1‑100 (MQ=255) gcCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTcaga > 1:3835745/1‑99 (MQ=255) gcCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTACAACGTTTTcagc < 1:1828740/100‑1 (MQ=255) aCGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTcagcagn < 2:5395112/100‑2 (MQ=255) gtcaTGTGGTGCCGCAGGTTTCCAATCGGCAGTAGTCGATTTCTGGTGGCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCCGTATTACCt < 2:1325681/97‑1 (MQ=255) gTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCt < 2:584946/100‑1 (MQ=255) tAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTg > 2:3663302/1‑100 (MQ=255) aTGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGc > 1:3776600/1‑100 (MQ=255) aTGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGc < 1:3016829/100‑1 (MQ=255) tgtgGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCg > 1:642999/1‑100 (MQ=255) tgtgGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCg > 1:929648/1‑100 (MQ=255) tggtgACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGaa > 2:2029888/1‑100 (MQ=255) tggtgACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGAACGGACATCTGCGACGTTTTCAGCAGTATTACCTGGCGaa > 2:5258034/1‑100 (MQ=255) ggtgACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAAt < 1:1521344/100‑1 (MQ=255) gtgACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATg > 1:4010780/1‑100 (MQ=255) tgACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATgc < 1:3418241/100‑1 (MQ=255) cGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGATGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCa > 2:2431129/1‑100 (MQ=255) cGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCa < 1:4507288/100‑1 (MQ=255) cGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCa < 1:3579656/100‑1 (MQ=255) cGCAGCTTTCCAAGCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTAAGCAGTATTACCTGGCGAATGCGCa > 2:2956286/1‑100 (MQ=255) gCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAg < 1:3352917/100‑1 (MQ=255) cAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAgg < 1:1497688/100‑1 (MQ=255) aGCTATACAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTGTCCGCAGTATTACCTGGCGAATGCGCAGGt > 2:5181608/1‑100 (MQ=255) gCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGtt > 1:3072150/1‑100 (MQ=255) cTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTc < 1:699529/100‑1 (MQ=255) tttCCAATCAGCAGCAGTCGATTTCCGGTGTCAATTTGGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCt > 2:5365577/1‑100 (MQ=255) ttCCAATCAGCAGCAGTTGATTTCCGGTGTCAATCTCGAGGAGGAGAACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTg < 2:2133162/100‑1 (MQ=255) ttCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTg < 1:1946066/100‑1 (MQ=255) ttCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTg > 1:1308284/1‑100 (MQ=255) tCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGc < 2:2792929/100‑1 (MQ=255) tCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGc < 2:3221381/100‑1 (MQ=255) tCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGc < 1:5407208/100‑1 (MQ=255) tCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGc < 2:4812713/100‑1 (MQ=255) ccAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCa < 2:1290984/100‑1 (MQ=255) ccAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCa < 1:213493/100‑1 (MQ=255) cAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAg > 1:849233/1‑100 (MQ=255) cAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAg < 2:490541/100‑1 (MQ=255) aaTCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGa > 1:4816153/1‑100 (MQ=255) aTCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGAc > 2:370843/1‑100 (MQ=255) aTCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGAc < 1:2036585/100‑1 (MQ=255) tCAGCAGCAGTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACg < 1:3291278/100‑1 (MQ=255) agcagcagTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACTGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGc < 1:2258810/100‑1 (MQ=255) agcagcagTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGc > 1:1954514/1‑100 (MQ=255) agcagcagTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGc < 1:3759485/100‑1 (MQ=255) gcagTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAAc > 2:1343387/1‑100 (MQ=255) gcagTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAAc > 1:5230422/1‑100 (MQ=255) agTCGATTTCCGGTGTCAATTTCGAGTTGGCGTAAGGAAAAGTGCAACGGTTTCTGCACAATTACCTGACGACTGCGAAAGTTCTCCCGACGTCAAAcac > 2:5475315/1‑98 (MQ=255) agTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAAcgc > 1:2063076/1‑100 (MQ=255) gTCGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAAcgcg > 2:4559187/1‑100 (MQ=255) cGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAt > 2:732364/1‑100 (MQ=255) cGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAt < 1:4995974/100‑1 (MQ=255) cGATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAt < 1:4121802/100‑1 (MQ=255) gATTTCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAtt > 1:1069222/1‑100 (MQ=255) ttCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAttttt < 1:966057/100‑1 (MQ=255) ttCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAttttt < 1:567384/100‑1 (MQ=255) ttCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAttttt < 1:95458/100‑1 (MQ=255) tCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGAtgtttn < 2:4660160/100‑2 (MQ=255) tCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTg < 2:1550421/100‑1 (MQ=255) tCCGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTg > 1:4709215/1‑100 (MQ=255) ccGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGa < 1:5164856/100‑1 (MQ=255) cGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGAt < 1:3038841/100‑1 (MQ=255) cGGTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGAt < 2:5145091/100‑1 (MQ=255) atctgtCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGAt < 1:3855193/97‑1 (MQ=255) ggTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATg > 1:3801014/1‑100 (MQ=255) ggTGTCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATg > 1:2862587/1‑100 (MQ=255) gtCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGAtagat > 2:3819893/1‑96 (MQ=255) gtCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATgcgc > 2:4130983/1‑100 (MQ=255) tCAATCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGGAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCt < 2:120529/100‑1 (MQ=255) cAACCTCGAGGAGGAGGACGGAAATCTTCAACGTTTTCGGCAGTATTACCTGCCACATGCGCAGGTTCTGCGGACGGCAATCGCGATTTTTGATGCGCTg > 2:1391957/1‑100 (MQ=255) aTCTCGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGAt < 2:2188539/100‑1 (MQ=255) tctcGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGAtt < 2:3974307/100‑1 (MQ=255) tctcGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGAtt < 2:1785763/100‑1 (MQ=255) tctcGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGAtt < 2:2120147/100‑1 (MQ=255) ctcGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTa > 1:4788674/1‑100 (MQ=255) cGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGTTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAc > 2:2231486/1‑100 (MQ=255) cGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAc > 1:4927076/1‑100 (MQ=255) cGAGGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAc > 2:2684768/1‑100 (MQ=255) | ATAAAACCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGATGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAC > NC_000913/1139819‑1140012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |