| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,244,222 | G→A | T102T (ACC→ACT) | ycgR ← | flagellar velocity braking protein, c‑di‑GMP‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,244,222 | 0 | G | A | 97.4% | 520.7 / 0.7 | 155 | T102T (ACC→ACT) | ycgR | flagellar velocity braking protein, c‑di‑GMP‑regulated |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base A (77/74); total (79/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
CCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCGGTAATGGTAATG > NC_000913/1244125‑1244318 | ccGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGcggtacagt < 1:3854955/100‑1 (MQ=255)ccGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGcggtacagt > 2:1689814/1‑100 (MQ=255) cgcgAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGcggtacagta > 1:4281819/1‑100 (MQ=255) cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGcggtacagta > 2:3317279/1‑100 (MQ=255) cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGcggtacagta > 1:488329/1‑100 (MQ=255) gCCAGTTTGGTCTGGGAAAAATAAGGCGGAAGGAGTGGGACGGAGATGCGGAAATATGGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGtaa > 1:4848722/1‑100 (MQ=255) cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGtaata < 2:204531/100‑1 (MQ=255) cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGtaata < 2:4725474/100‑1 (MQ=255) cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGtaata < 1:521778/100‑1 (MQ=255) gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGCGGCGGTACAGTAATaaa > 1:5124035/1‑100 (MQ=255) gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATaaa > 2:4407632/1‑100 (MQ=255) gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATaaa > 1:139051/1‑100 (MQ=255) ttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATg < 2:1694226/100‑1 (MQ=255) tGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGc > 2:1235061/1‑100 (MQ=255) ggTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGcc < 2:3508721/100‑1 (MQ=255) ggTCTGGAAAAAATAAGGCGGATGGAGTGGGGAGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGcc < 2:249304/100‑1 (MQ=255) gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCg < 1:3348442/100‑1 (MQ=255) tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCgg < 1:4012299/100‑1 (MQ=255) cTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGa > 1:1052451/1‑100 (MQ=255) cTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATAGCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGa > 2:2490398/1‑100 (MQ=255) tGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGaa > 1:5291623/1‑100 (MQ=255) ggCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAg > 1:2620990/1‑100 (MQ=255) ggCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAg > 1:2947026/1‑100 (MQ=255) gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGc < 1:3236540/100‑1 (MQ=255) cAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCt > 1:3233580/1‑100 (MQ=255) aaaaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTg > 2:4312629/1‑100 (MQ=255) aaaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGc < 1:1907800/100‑1 (MQ=255) aTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAg < 1:179222/100‑1 (MQ=255) gCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTc < 1:1227074/100‑1 (MQ=255) cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCa > 2:3911194/1‑100 (MQ=255) cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCa > 2:3275481/1‑100 (MQ=255) ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCAc < 2:481273/100‑1 (MQ=255) tGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCActct > 2:3199061/1‑100 (MQ=255) ggAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTctg > 2:5382554/1‑100 (MQ=255) gAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgc > 1:2942051/1‑100 (MQ=255) gAGTGGGGCGGAGATGCGGAAATATCGGCGTCGGTGTACAAACCGTAAGGTGGGAGGCGGAACAGTAATAAAGGCCGGAAGCTGCAAGGATTCACTctgc > 2:1945446/1‑100 (MQ=255) gAGTGGGGCGGAGAGGCGGAAATATCGGCGTCGTTGTACAAACCATAATGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgc < 1:2547942/100‑1 (MQ=255) gTGGGGCGGAGGTACGGAAAAATCGGCGTCGTGGTACAAACCATTAGGTGTGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg < 2:956931/100‑1 (MQ=255) ggCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGTCGGAAGCTGCAAGTATTCACTCTGCTGTAgt > 2:1979605/1‑100 (MQ=255) ggCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgt < 2:3864134/100‑1 (MQ=255) gCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt < 2:482895/100‑1 (MQ=255) cGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttg > 1:5386913/1‑100 (MQ=255) gaTGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCa < 2:2044015/100‑1 (MQ=255) aTGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCaa < 1:846677/100‑1 (MQ=255) tGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc < 1:4062127/100‑1 (MQ=255) tGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGCGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc > 2:2102676/1‑100 (MQ=255) cGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg > 1:2693718/1‑100 (MQ=255) cGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg < 1:1251679/100‑1 (MQ=255) cGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg > 1:3708152/1‑100 (MQ=255) cGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTAACTCTGCTGTAGTTGTTCAACAg > 2:797061/1‑100 (MQ=255) gAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTa < 2:3268335/100‑1 (MQ=255) atatCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc < 2:586285/100‑1 (MQ=255) atatCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc < 2:615719/100‑1 (MQ=255) tatCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt > 1:112486/1‑100 (MQ=255) atCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc < 2:4242597/100‑1 (MQ=255) atCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc > 1:3918942/1‑100 (MQ=255) tCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCg < 1:1531290/100‑1 (MQ=255) tCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCg < 2:2709429/100‑1 (MQ=255) tCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCg < 1:1748839/100‑1 (MQ=255) ggCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc < 2:3754670/100‑1 (MQ=255) ggCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc > 2:1095260/1‑100 (MQ=255) gtcgtTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACttt > 1:4096629/1‑100 (MQ=255) tctttGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTc < 2:3431321/97‑1 (MQ=255) gtTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGc > 2:2929032/1‑100 (MQ=255) gtTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGc > 1:3645296/1‑100 (MQ=255) gtTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGc > 1:1295470/1‑100 (MQ=255) gtTGTACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGc > 1:5531704/1‑100 (MQ=255) tACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAGGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCAccc < 2:5077459/100‑1 (MQ=255) tACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCAccc < 2:2704671/100‑1 (MQ=255) tACAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCAccc > 2:526892/1‑100 (MQ=255) aCAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCt < 2:4912842/100‑1 (MQ=255) aCAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCt < 1:3893967/100‑1 (MQ=255) aCAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCt > 1:1918340/1‑100 (MQ=255) aCAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCt > 1:2060487/1‑100 (MQ=255) cAAACCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTg > 2:5223302/1‑100 (MQ=255) acggaTAAGGTGGGAGGCGGTGCAGTAATAAATGCAGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCGTGAg < 2:4641205/96‑1 (MQ=255) aaCCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAg > 1:2386734/1‑100 (MQ=255) aaCCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAg > 1:4274715/1‑100 (MQ=255) aCCATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGt > 1:2103185/1‑100 (MQ=255) ccATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGtt > 1:2596679/1‑100 (MQ=255) ccATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGtt > 2:405151/1‑100 (MQ=255) cATAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCCACAGTAAACTCGACTTTCGCACCCTGAGttt > 1:50122/1‑100 (MQ=255) aTAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAGACTCGACTTTCGCACCCTGAGTTTc > 2:4366403/1‑100 (MQ=255) aTAAGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACGGTAAACTCGACTTTCGCACCCTGAGTTTc > 1:1333180/1‑100 (MQ=255) aaGGTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTcgg < 2:4206416/100‑1 (MQ=255) ggTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTcggcg > 1:3716641/1‑100 (MQ=255) gTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTcggcgg > 1:4159690/1‑100 (MQ=255) gTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTcggcgg < 2:1596242/100‑1 (MQ=255) gTGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTcggcgg < 1:2845757/100‑1 (MQ=255) tGGGAGGCGGTACAGTAATAAGTGCCGGAAGCTGCAAGTGTTCACTCTGCTGTAGTTGTGCAACAGTAAACGCGACTTTCGCACCCTGAGTTTCGGCggt < 1:5390972/100‑1 (MQ=255) tGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggt > 1:1677345/1‑100 (MQ=255) tGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggt < 1:1507134/100‑1 (MQ=255) tGGGAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCGGTAGTTGCTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggt < 1:5282492/100‑1 (MQ=255) ggAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGCCTTTCGCACCCTGAGTTTCGGCggtaa > 1:4480016/1‑100 (MQ=255) gAGGCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaat < 1:1041876/100‑1 (MQ=255) ggCGGTACAGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaatgg > 2:4540427/1‑100 (MQ=255) cggtacagtaATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaatggta > 2:2548995/1‑100 (MQ=255) cggtacagtaATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaatggta > 1:2399443/1‑100 (MQ=255) ggtacagtaATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaatggtaa < 1:409136/100‑1 (MQ=255) gtacagtaATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCACCACTAAACTCGACTTTCGCACCCTGAGTTTCGGCggtaagggtaat > 1:3082552/1‑100 (MQ=255) | CCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTCGCACCCTGAGTTTCGGCGGTAATGGTAATG > NC_000913/1244125‑1244318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |