| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,605,170 | A→C | G40G (GGA→GGC) | lsrB → | autoinducer 2‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,605,170 | 0 | A | C | 98.5% | 723.4 / ‑0.8 | 203 | G40G (GGA→GGC) | lsrB | autoinducer 2‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base C (83/117); total (85/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 203 total aligned reads displayed.
AAATCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGATTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTGGT > NC_000913/1605073‑1605266 | aaaTCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCtt < 1:4406065/100‑1 (MQ=255) aaTTGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTCTGAATGTGGAGGCCGCAGAGCGCATTGCCTTTATACCCAAACTGGTTGGCGGGGGCttt > 2:5054732/1‑100 (MQ=255) aTCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCtttt < 2:2651435/100‑1 (MQ=255) tCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCttttt < 2:1642714/100‑1 (MQ=255) tCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCttttt < 1:4247169/100‑1 (MQ=255) cGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCtttttt < 2:2895226/100‑1 (MQ=255) cGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCtttttt < 2:2733143/100‑1 (MQ=255) cGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCtttttt < 1:941325/100‑1 (MQ=255) gCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTa < 2:2780303/100‑1 (MQ=255) gCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTa < 1:2538068/100‑1 (MQ=255) ccTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTAc < 2:142585/100‑1 (MQ=255) ccTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTAc < 2:141371/100‑1 (MQ=255) cttacttaGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACCGGTTGGCGTGGGCTTTTTTAcc < 2:2508466/100‑1 (MQ=255) acttaGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGc < 2:4518118/100‑1 (MQ=255) acttaGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGc < 2:1710519/100‑1 (MQ=255) cttaGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCg > 1:2789478/1‑100 (MQ=255) aGCGCTCTTGGCATTACCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTg < 1:3183874/100‑1 (MQ=255) gcgcTCTTGGCATTGCCGCAATCTCTAGGAATGTGCAGGCCGCAGAGCGTATTGCATTTCTTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTgg < 1:4830538/100‑1 (MQ=255) cgcTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGc < 2:1025351/100‑1 (MQ=255) gcTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCa < 2:8724/100‑1 (MQ=255) gcTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCa > 1:5184772/1‑100 (MQ=255) ctctTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCaa > 2:4809570/1‑100 (MQ=255) tctTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAAc < 2:4062942/100‑1 (MQ=255) ttGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACgg < 1:715983/100‑1 (MQ=255) cATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGca > 1:3115091/1‑100 (MQ=255) cATTGCCGCAATCTCTATGAATGTGCAAGCCGCAGAGCGTATTGCATTTATTCCCAAACCGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGca > 1:4917931/1‑100 (MQ=255) aTTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGcac < 1:302378/100‑1 (MQ=255) gCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCacaac < 2:2658742/100‑1 (MQ=255) ccGCGATCTTTATGAATGTTCTGGCCGCAGAGCGTATTGCATTGATTGCCAACCTGGTTGGCGTAGGCCTGTTTACCAGGCGCGGCAACGGAGCctaaca > 2:1001038/1‑100 (MQ=255) ccGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCacaaca > 1:3771226/1‑100 (MQ=255) cGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCAcaacaa > 1:1775442/1‑100 (MQ=255) gCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAg > 1:1325328/1‑100 (MQ=255) gCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAg < 2:3582661/100‑1 (MQ=255) tctcTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCggg < 1:4541036/100‑1 (MQ=255) tctcTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCggg < 2:4416320/100‑1 (MQ=255) ctctATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGt > 2:5326884/1‑100 (MQ=255) tctATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTa < 2:760670/100‑1 (MQ=255) tctATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTa < 1:3325716/100‑1 (MQ=255) tctATGAATGTGCAGGCCGCAGAGCGGATTGCATTTATTCCCAGACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTa < 2:3010828/100‑1 (MQ=255) aTGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAag < 1:3140344/100‑1 (MQ=255) aTGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAag < 2:4581954/100‑1 (MQ=255) tGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAaga > 2:5015962/1‑100 (MQ=255) gAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAagag > 2:4559355/1‑100 (MQ=255) aaTGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGc < 1:2754959/100‑1 (MQ=255) aaTGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGc > 1:5293042/1‑100 (MQ=255) aaTGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGc < 1:619160/100‑1 (MQ=255) aaTGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGc < 1:3293722/100‑1 (MQ=255) gtgCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTgg > 1:2897052/1‑100 (MQ=255) gtgCAGGCCGCAGAGCGTATTGCATTGATTCCCAAACTGGTTGGCGTAGGCTTTGTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTgg > 2:5145026/1‑100 (MQ=255) tgCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTggn < 1:1035352/100‑2 (MQ=255) tgCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTggg > 1:2454272/1‑100 (MQ=255) tgCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTggg > 1:3700054/1‑100 (MQ=255) gCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGc > 1:1088308/1‑100 (MQ=255) gCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGc < 2:2193839/100‑1 (MQ=255) cAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCg > 1:3535547/1‑100 (MQ=255) cAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCg < 1:446896/100‑1 (MQ=255) cAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCg > 1:1846223/1‑100 (MQ=255) cAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCg > 1:3838736/1‑100 (MQ=255) aGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGt > 1:1254752/1‑100 (MQ=255) aGGCCGCAGAGCGTATTGCACTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGt > 1:4354668/1‑100 (MQ=255) ggCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGtt > 1:4120621/1‑100 (MQ=255) ccGCAGGGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGa < 2:3412243/100‑1 (MQ=255) ccGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGa > 2:3677677/1‑100 (MQ=255) ccGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGa < 2:4859445/100‑1 (MQ=255) ccGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGa < 2:2364881/100‑1 (MQ=255) cGCAGAGGGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTGTGTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTTAAGAGCTGGGCGTTGAt > 2:1796502/1‑100 (MQ=255) gCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGAtg < 1:2212021/100‑1 (MQ=255) gCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGAtg < 2:2284485/100‑1 (MQ=255) gCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGAtg < 2:2343283/100‑1 (MQ=255) agagCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGAtgtg < 1:5512516/100‑1 (MQ=255) agagCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGAtgtg > 1:430984/1‑100 (MQ=255) agCGTATTGCATTTATTCCCATACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGAc < 1:115190/100‑1 (MQ=255) agCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGAc < 2:3278080/100‑1 (MQ=255) agCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGACAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGAc > 2:3911261/1‑100 (MQ=255) gCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGAcc < 2:1767836/100‑1 (MQ=255) gTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTa < 2:3143969/100‑1 (MQ=255) gTATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTa < 1:1962895/100‑1 (MQ=255) tATTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTac > 1:1598232/1‑100 (MQ=255) aTTGCATTTATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTacg > 2:1990212/1‑100 (MQ=255) aTTTATTCCCAAACTGGTTGGCGTGGGATTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACggg < 1:4266960/100‑1 (MQ=255) tttATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGc > 2:2619337/1‑100 (MQ=255) tATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCg < 1:3711827/100‑1 (MQ=255) tATTCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCg > 2:4471916/1‑100 (MQ=255) ttCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGAc < 2:1307828/100‑1 (MQ=255) ttCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGAGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGAc > 2:5369723/1‑100 (MQ=255) tCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACa > 2:1124084/1‑100 (MQ=255) tCCCAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACa < 1:3245370/100‑1 (MQ=255) cccAAAGTGGTTGGCGTGGGCTTTTTTACCAGCGGTAGCAACGGCGCACGACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTCCGACGGGACGACAg > 2:38099/1‑100 (MQ=255) cccAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAg < 1:1786244/100‑1 (MQ=255) ccAAACTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGa > 1:4014097/1‑100 (MQ=255) aaCTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAAcc < 2:4253323/100‑1 (MQ=255) aaCTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAAcc < 1:2645083/100‑1 (MQ=255) aCTGGTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAAccc < 2:4918510/100‑1 (MQ=255) gTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAgtg < 2:546264/100‑1 (MQ=255) gTTGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAgtg > 1:3955255/1‑100 (MQ=255) tGGCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGtt < 1:4102170/100‑1 (MQ=255) gCGTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTc < 1:3481927/100‑1 (MQ=255) gTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTg < 1:4941331/100‑1 (MQ=255) gTGGGCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTg > 2:2013372/1‑100 (MQ=255) gggCTTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTGGt < 2:1882929/100‑1 (MQ=255) | AAATCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGATTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTGGT > NC_000913/1605073‑1605266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |