| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 162,349 | A→C | Y82S (TAC→TCC) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 162,349 | 0 | A | C | 99.1% | 774.4 / ‑2.2 | 217 | Y82S (TAC→TCC) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base C (104/111); total (106/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.57e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
AAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACT > NC_000913/162252‑162445 | aaaaTTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTccc < 2:3352770/100‑1 (MQ=255)aaaaTTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTccc < 1:5489622/100‑1 (MQ=255) aTTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGa < 1:2892569/100‑1 (MQ=255) ttATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTTGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAt < 2:5015074/100‑1 (MQ=255) ttATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAt < 2:2610887/100‑1 (MQ=255) ttATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAt < 1:3783368/100‑1 (MQ=255) tCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcg > 1:3276048/1‑100 (MQ=255) ccTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgt > 1:578879/1‑100 (MQ=255) ctgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtg > 2:4320667/1‑100 (MQ=255) ctgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtg < 1:909973/100‑1 (MQ=255) ctgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtg > 1:983815/1‑100 (MQ=255) ctgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtg < 2:136674/100‑1 (MQ=255) tgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtgc > 1:2329030/1‑100 (MQ=255) tgctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtgc > 1:5267967/1‑100 (MQ=255) gAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCaaa > 1:1968995/1‑100 (MQ=255) aGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCaaaa > 2:5275097/1‑100 (MQ=255) gCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAAc < 1:1097252/100‑1 (MQ=255) gCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAAc < 1:2798848/100‑1 (MQ=255) cgcgTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTg > 2:1243737/1‑100 (MQ=255) cgcgTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGACTCCCGGATGCGTGCGCAAAACTg > 1:556517/1‑100 (MQ=255) gtcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGt < 2:1304746/100‑1 (MQ=255) gtcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGt > 1:1279311/1‑100 (MQ=255) tcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTc < 2:2519459/100‑1 (MQ=255) cgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCg < 1:716137/100‑1 (MQ=255) gtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCgg < 1:5347400/100‑1 (MQ=255) gtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCgg > 2:5409755/1‑100 (MQ=255) gtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCgg > 2:1880744/1‑100 (MQ=255) tcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCggg > 1:1663015/1‑100 (MQ=255) cTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGc < 2:2570679/100‑1 (MQ=255) cTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGc < 1:4939821/100‑1 (MQ=255) cTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGc < 2:1845834/100‑1 (MQ=255) tGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGcc < 2:3754029/100‑1 (MQ=255) cggcgCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGaa < 2:3237316/100‑1 (MQ=255) ggcgCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAAt > 2:481117/1‑100 (MQ=255) ggcgCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAAt < 1:4361254/100‑1 (MQ=255) cgcgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATAc > 2:2006360/1‑100 (MQ=255) cgcgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATAc < 1:3711375/100‑1 (MQ=255) cgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATAccc < 2:397864/100‑1 (MQ=255) cgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATAccc > 1:1795901/1‑100 (MQ=255) aaCGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGcc < 2:231595/100‑1 (MQ=255) cGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTg < 2:2669346/100‑1 (MQ=255) cGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTg < 1:3978925/100‑1 (MQ=255) gTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTgg > 1:2095197/1‑100 (MQ=255) gTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTgg > 1:2590383/1‑100 (MQ=255) gTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTgg > 1:1318711/1‑100 (MQ=255) gTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGAATGCGCGCGCAAAACTGCGTCGGGCCGAATACCCGCCTgg > 2:5251062/1‑100 (MQ=255) tCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGa < 1:620198/100‑1 (MQ=255) cgcgCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGaa > 2:4428359/1‑100 (MQ=255) cgcgCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGaa < 2:1928155/100‑1 (MQ=255) gcgcAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAg < 1:408568/100‑1 (MQ=255) cgcAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGAAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGt < 2:3096086/100‑1 (MQ=255) gcAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTg > 2:1779458/1‑100 (MQ=255) cAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTgg < 1:3350861/100‑1 (MQ=255) aaCGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGt < 2:484398/100‑1 (MQ=255) aaCGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGt < 2:5064278/100‑1 (MQ=255) aaCGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGt < 2:4207099/100‑1 (MQ=255) gCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGGGTGCGCAAAACTCCGTCGGGCCGAATACCCGCCTGGAAGTGGTTAcc < 2:239662/100‑1 (MQ=255) cttGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTAcc < 1:838914/98‑1 (MQ=255) ggCGAAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGaa > 2:4658346/1‑100 (MQ=255) gagaaGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAg < 1:1265913/96‑1 (MQ=255) gCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAg > 1:3894828/1‑100 (MQ=255) cGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAgg < 1:1987736/100‑1 (MQ=255) ggAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGc < 1:3411458/100‑1 (MQ=255) gctgctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTg > 1:3619992/1‑100 (MQ=255) ctgctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGc < 2:1087514/100‑1 (MQ=255) gctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTg > 1:821692/1‑100 (MQ=255) gctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTg > 1:2694894/1‑100 (MQ=255) gctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTg > 2:4450770/1‑100 (MQ=255) ctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGa < 2:731122/100‑1 (MQ=255) aaCGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcgc < 1:520823/100‑1 (MQ=255) aCGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcgcg > 1:1373560/1‑100 (MQ=255) aCGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcgcg < 1:2274003/100‑1 (MQ=255) aCGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcgcg < 1:2959740/100‑1 (MQ=255) aCGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcgcg > 2:3832176/1‑100 (MQ=255) cGAAACGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTCCGTCGGGCCCAATGCCCCCCTGGCAGTCGTTACCGAAGGCGTGCCGACgcgc > 2:2936922/1‑100 (MQ=255) cGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGCCgcgc > 1:3095822/1‑100 (MQ=255) cGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACgcgc > 1:683985/1‑100 (MQ=255) cGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCAGCCTGGAAGTGGTTACCGAAGGCGTGCTGACgcgc > 1:2520611/1‑100 (MQ=255) gAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCa < 1:5098567/100‑1 (MQ=255) aaaaGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCAt < 1:2549046/100‑1 (MQ=255) aaGCCAGGCTATACCGTTGGCTCGCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCTGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGa < 1:4860345/100‑1 (MQ=255) aGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGAt < 2:3435341/100‑1 (MQ=255) aGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGAt > 2:3961091/1‑100 (MQ=255) aGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGACCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGAt > 2:2446266/1‑100 (MQ=255) ccAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATcc > 2:1594487/1‑100 (MQ=255) ccAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATcc < 1:4464484/100‑1 (MQ=255) cAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCa < 1:78041/100‑1 (MQ=255) cAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCa > 1:1421714/1‑100 (MQ=255) aGGCGATACCGTGGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGAAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAg > 2:5289099/1‑100 (MQ=255) ggCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGc > 2:2229272/1‑100 (MQ=255) gCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCg < 2:2073022/100‑1 (MQ=255) gATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTg < 2:2807882/100‑1 (MQ=255) aTACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGa < 1:3185047/100‑1 (MQ=255) ccGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGAccc > 2:3246860/1‑100 (MQ=255) cGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCg < 1:286066/100‑1 (MQ=255) cGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCg > 2:3210218/1‑100 (MQ=255) tGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGaa < 1:4180499/100‑1 (MQ=255) ggCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAAc < 2:3700408/100‑1 (MQ=255) ggCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAAc < 1:244155/100‑1 (MQ=255) gCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACt > 2:4887318/1‑100 (MQ=255) | AAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACT > NC_000913/162252‑162445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |