BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,673,237	T→G	I89L (ATT→CTT)	mdtJ ←	multidrug efflux system transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,673,237	0	T	G	100.0%	687.7 / NA	188	I89L (ATT→CTT)	mdtJ	multidrug efflux system transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (100/88); total (100/88)

Only 100 of 192 total aligned reads displayed.

ACTGCGCCATGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAATTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTA  >  NC_000913/1673140‑1673332

 cTGCGCCATGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAgttt                                                                                              <  2:1078713/100‑1 (MQ=255)

    cgcCATGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTtcat                                                                                           <  2:1445345/100‑1 (MQ=255)

       cATGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAg                                                                                        <  2:8691/100‑1 (MQ=255)

        aTGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGc                                                                                       <  1:1758735/100‑1 (MQ=255)

          ggTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGa                                                                                     >  2:2530569/1‑100 (MQ=255)

            ttCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATa                                                                                   <  1:4532230/100‑1 (MQ=255)

            ttCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATa                                                                                   >  1:2952354/1‑100 (MQ=255)

            ttCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATa                                                                                   <  1:2733144/100‑1 (MQ=255)

             tCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATaa                                                                                  >  1:2779534/1‑100 (MQ=255)

              cACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATaaa                                                                                 >  2:359902/1‑100 (MQ=255)

               aCCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAAc                                                                                <  2:5058506/100‑1 (MQ=255)

               aCCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAAc                                                                                <  2:4009901/100‑1 (MQ=255)

                 cTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTCTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACtt                                                                              <  2:5302701/100‑1 (MQ=255)

                  tCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACttt                                                                             >  1:1088317/1‑100 (MQ=255)

                  tCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACttt                                                                             <  1:4645293/100‑1 (MQ=255)

                   ccAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtc                                                                            >  2:685779/1‑100 (MQ=255)

                   ccAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtc                                                                            >  1:4389988/1‑100 (MQ=255)

                     aGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgt                                                                          >  1:25535/1‑100 (MQ=255)

                     aGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgt                                                                          <  2:1866380/100‑1 (MQ=255)

                     aGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgt                                                                          <  2:2862102/100‑1 (MQ=255)

                     aGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgt                                                                          >  1:1474826/1‑100 (MQ=255)

                      gTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgtc                                                                         <  2:2202025/100‑1 (MQ=255)

                      gTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgtc                                                                         <  2:2753048/100‑1 (MQ=255)

                      gTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgtc                                                                         <  1:2972169/100‑1 (MQ=255)

                       ttCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgtcg                                                                        <  1:4333853/100‑1 (MQ=255)

                       ttCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTtcgtcg                                                                        <  2:3710576/100‑1 (MQ=255)

                         cAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGaa                                                                      <  2:3183939/100‑1 (MQ=255)

                          aGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGTCCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAAt                                                                     <  2:5409197/100‑1 (MQ=255)

                          aGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAAt                                                                     <  1:2896563/100‑1 (MQ=255)

                           ggTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATa                                                                    <  1:1552891/100‑1 (MQ=255)

                           ggTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATa                                                                    >  1:2035314/1‑100 (MQ=255)

                           ggTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGACAAACTTTCGTCGAATa                                                                    >  1:854880/1‑100 (MQ=255)

                            gTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATaa                                                                   >  2:5498112/1‑100 (MQ=255)

                              ttACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACa                                                                 >  2:1514105/1‑100 (MQ=255)

                               tACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACaa                                                                >  1:2048596/1‑100 (MQ=255)

                                 cgcgCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACaaaa                                                              >  2:4164329/1‑100 (MQ=255)

                                 cgcgCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACaaaa                                                              >  2:2717540/1‑100 (MQ=255)

                                 cgcgCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACaaaa                                                              <  1:4024434/100‑1 (MQ=255)

                                  gcgcTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAAc                                                             <  1:3376692/100‑1 (MQ=255)

                                   cgcTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACg                                                            >  1:4766206/1‑100 (MQ=255)

                                       ttACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTaa                                                        >  1:2118944/1‑100 (MQ=255)

                                       ttACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTaa                                                        <  2:2586401/100‑1 (MQ=255)

                                       ttACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTaa                                                        >  1:3915425/1‑100 (MQ=255)

                                        tACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTaaa                                                       >  1:2939493/1‑100 (MQ=255)

                                          cGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGATGGTTAACCCGGCAAGTATCATCAGCGATAAACTTTAGTCGAATAACAAAGCGCTAAACa                                                     >  1:4854120/1‑100 (MQ=255)

                                           tggTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACaa                                                    <  1:4172696/99‑1 (MQ=255)

                                            ggTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAg                                                   <  1:3867593/100‑1 (MQ=255)

                                               aCCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGta                                                >  1:4274290/1‑100 (MQ=255)

                                                ccTGATTTTATTAATATAATCTCGGCGACCAGGGTGTTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGtaa                                               >  2:4415260/1‑100 (MQ=255)

                                                ccTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGtaa                                               >  2:2398634/1‑100 (MQ=255)

                                                 cTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGtaat                                              >  1:3062051/1‑100 (MQ=255)

                                                 cTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGtaat                                              <  2:2169215/100‑1 (MQ=255)

                                                 cTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGtaat                                              <  2:3881720/100‑1 (MQ=255)

                                                    aTTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTaataaa                                           >  1:152984/1‑100 (MQ=255)

                                                     ttttATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTaataaat                                          <  2:5021504/100‑1 (MQ=255)

                                                      tttATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTaataaata                                         >  2:457433/1‑100 (MQ=255)

                                                       ttATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGGATAACAAAACGCTAAACAAGGTAataaataa                                        >  2:4844248/1‑100 (MQ=255)

                                                        tATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCACGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACATGGTAAtaaataaa                                       <  1:4913271/100‑1 (MQ=255)

                                                        tATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAAtaaataaa                                       >  1:5358571/1‑100 (MQ=255)

                                                         aTCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaa                                      >  1:1085407/1‑100 (MQ=255)

                                                         aTCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaa                                      <  1:3444964/100‑1 (MQ=255)

                                                          tCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaat                                     <  1:4945464/100‑1 (MQ=255)

                                                          tCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaat                                     <  1:646814/100‑1 (MQ=255)

                                                          tCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaat                                     <  2:2047844/100‑1 (MQ=255)

                                                           cAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATaaataaaata                                    >  1:3643590/1‑100 (MQ=255)

                                                            nacacAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATAc                                   >  1:981480/2‑100 (MQ=255)

                                                            aaCACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATAc                                   >  1:2871079/1‑100 (MQ=255)

                                                            aaCACAATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATAc                                   >  2:2506977/1‑100 (MQ=255)

                                                              cacaATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCGAAACAAGGTAATAAATAAAATACCg                                 >  2:1373761/1‑100 (MQ=255)

                                                               acaATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGa                                <  1:4205552/100‑1 (MQ=255)

                                                                caATCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGAt                               >  1:1320433/1‑100 (MQ=255)

                                                                 aaTCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATa                              <  2:3749974/100‑1 (MQ=255)

                                                                  aTCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATAc                             >  1:788606/1‑100 (MQ=255)

                                                                  aTCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATAc                             >  2:60177/1‑100 (MQ=255)

                                                                  aTCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATAc                             <  2:4788575/100‑1 (MQ=255)

                                                                   tCCCGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATAcc                            <  2:1722002/100‑1 (MQ=255)

                                                                    cccGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCt                           <  2:2033929/100‑1 (MQ=255)

                                                                    cccGGCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCt                           >  1:2915644/1‑100 (MQ=255)

                                                                        gCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTccc                       <  1:694256/100‑1 (MQ=255)

                                                                        gCGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTccc                       <  2:4918455/100‑1 (MQ=255)

                                                                         cGACCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCca                      <  1:2625441/100‑1 (MQ=255)

                                                                           aCCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCcaca                    >  1:2538513/1‑100 (MQ=255)

                                                                           aCCAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCcaca                    >  1:5183403/1‑100 (MQ=255)

                                                                            ccAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAg                   >  1:3142091/1‑100 (MQ=255)

                                                                             cAGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAGACAAGGTAATAAATAAAATACCGATACCTTCCCACAgc                  >  1:986017/1‑100 (MQ=255)

                                                                              aGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAgcg                 >  1:2422425/1‑100 (MQ=255)

                                                                              aGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAgcg                 >  1:1905062/1‑100 (MQ=255)

                                                                              aGGGTGGTTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAgcg                 <  2:2795577/100‑1 (MQ=255)

                                                                                ggtggtTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCa               >  1:1166472/1‑100 (MQ=255)

                                                                                   ggtTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATaa            >  1:2128353/1‑100 (MQ=255)

                                                                                    gtTAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAg           <  2:2258172/100‑1 (MQ=255)

                                                                                     ttAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGc          <  1:465171/100‑1 (MQ=255)

                                                                                      tAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCt         <  1:1141582/100‑1 (MQ=255)

                                                                                      tAACCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCt         >  1:568975/1‑100 (MQ=255)

                                                                                       aaCCCGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTa        >  1:561386/1‑100 (MQ=255)

                                                                                         cccGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACg      <  1:4099176/100‑1 (MQ=255)

                                                                                         cccGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACg      >  1:2578679/1‑100 (MQ=255)

                                                                                          ccGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGc     <  2:1742233/100‑1 (MQ=255)

                                                                                           cGGCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGcc    <  2:3545874/100‑1 (MQ=255)

                                                                                             gCAAGTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTa  <  2:2959688/100‑1 (MQ=255)

ACTGCGCCATGGTTCACCTCCAGTTCAGGTTTACGCGCTTTACGGGTACCTGATTTTATCAACACAATCCCGGCGACCAGGGTGGTTAACCCGGCAATTTTCATCAGCGATAAACTTTCGTCGAATAACAAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTA  >  NC_000913/1673140‑1673332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`