| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,741,263 | A→C | intergenic (+141/‑150) | ydhC → / → cfa | putative arabinose efflux transporter/cyclopropane fatty acyl phospholipid synthase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,741,263 | 0 | A | C | 99.5% | 744.6 / ‑4.3 | 208 | intergenic (+141/‑150) | ydhC/cfa | putative arabinose efflux transporter/cyclopropane fatty acyl phospholipid synthase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (101/106); total (101/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
Only 100 of 209 total aligned reads displayed.
TTGTATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAA > NC_000913/1741166‑1741359 | ttgtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTg < 1:1030789/100‑1 (MQ=255)ttgtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTg < 2:2643459/100‑1 (MQ=255)ttgtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTg < 1:3383905/100‑1 (MQ=255) gtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGa > 2:630344/1‑100 (MQ=255) gtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGa < 2:2857422/100‑1 (MQ=255) gtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGa > 2:4451684/1‑100 (MQ=255) gtATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGa > 1:1889502/1‑100 (MQ=255) aTGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATTTTTTTTTTTTTTTTTTTTTTGATCGTTCCCGACTCACTCTGGATa > 2:1606773/1‑100 (MQ=255) gATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGt < 1:92426/100‑1 (MQ=255) gATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGt < 2:2508027/100‑1 (MQ=255) aTTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTc < 1:4729285/100‑1 (MQ=255) aTTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTc < 1:415050/100‑1 (MQ=255) aTTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTc > 2:3630090/1‑100 (MQ=255) ttGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCa > 2:3062463/1‑100 (MQ=255) tGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCAt > 1:3089364/1‑100 (MQ=255) naaaTTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCAtt > 1:1146285/2‑100 (MQ=255) gAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCTGACTCACTCTGGATAGTCAtt > 2:1851593/1‑100 (MQ=255) gAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCAtt > 2:4724194/1‑100 (MQ=255) aaaTGAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCAttt > 2:4639740/1‑100 (MQ=255) nttAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCg > 1:4628643/2‑100 (MQ=255) ttAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCgg < 1:1826958/100‑1 (MQ=255) ttAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCgg < 2:3801594/100‑1 (MQ=255) tAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGc < 2:2239479/100‑1 (MQ=255) gCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCaa < 1:1502555/100‑1 (MQ=255) ggCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTATTTTTTTTTTATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAgg > 2:2577845/1‑100 (MQ=255) ggCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAgg > 1:1103255/1‑100 (MQ=255) gCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGCTCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAggg < 2:1498844/100‑1 (MQ=255) gCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAggg > 2:1323034/1‑100 (MQ=255) ccTATACTACTTTCGAGTTGTTAACGCTACTATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGt < 2:1751756/100‑1 (MQ=255) ataCTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTtcc < 1:522551/100‑1 (MQ=255) taCTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGGCTTAATCTGTATAATAATTTCGGCAAGGGTgcct > 2:5439323/1‑100 (MQ=255) cTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTtcctcc < 1:3824676/100‑1 (MQ=255) cTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTtcctcc < 1:3988714/100‑1 (MQ=255) cTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTtcctcc > 1:278145/1‑100 (MQ=255) aTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCttt > 2:1525646/1‑100 (MQ=255) aTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCttt < 1:423284/100‑1 (MQ=255) tCGAGTTGTTAAAGCTTCGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCTCTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTccn < 1:4476359/100‑2 (MQ=255) cGAGTTGTTCCAGCTACGATAAATATTATGTTCTTACGGGGACAGCATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCct < 1:257811/100‑1 (MQ=255) cGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCct > 1:2259659/1‑100 (MQ=255) gAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCctc > 1:2940670/1‑100 (MQ=255) gAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCctc < 1:3091203/100‑1 (MQ=255) aGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCctct < 2:4297720/100‑1 (MQ=255) gttgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTg > 1:1286535/1‑100 (MQ=255) ttgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGt < 2:1780775/100‑1 (MQ=255) ttgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGt < 2:818087/100‑1 (MQ=255) tgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGtt > 1:3727601/1‑100 (MQ=255) tgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGtt > 1:5327021/1‑100 (MQ=255) tgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGtt > 1:3429734/1‑100 (MQ=255) gttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTc < 1:161978/100‑1 (MQ=255) tAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTa > 2:2433493/1‑100 (MQ=255) tAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTa > 2:2935783/1‑100 (MQ=255) tAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTa > 2:1663383/1‑100 (MQ=255) tAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTa > 1:2957865/1‑100 (MQ=255) aaaGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTAc < 2:1139484/100‑1 (MQ=255) aaGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACg > 1:1425787/1‑100 (MQ=255) aGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGt < 2:2252838/100‑1 (MQ=255) aGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGt > 2:3828154/1‑100 (MQ=255) gCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTc > 1:635608/1‑100 (MQ=255) cTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCg < 2:3190198/100‑1 (MQ=255) tACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCgg > 2:5066291/1‑100 (MQ=255) cGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGAt > 1:750347/1‑100 (MQ=255) gATAACTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGAtt < 1:5268968/100‑1 (MQ=255) tAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtat > 2:3775726/1‑100 (MQ=255) tAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtat < 2:746955/100‑1 (MQ=255) aaaTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtata < 1:2862983/100‑1 (MQ=255) aaaTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtata < 2:676891/100‑1 (MQ=255) aaTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAg < 2:4092147/100‑1 (MQ=255) aaTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAg < 1:1028395/100‑1 (MQ=255) attatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACt > 1:2240917/1‑100 (MQ=255) ttatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTc > 1:2136635/1‑100 (MQ=255) ttatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTATACGTCGGATTATAGACTc > 2:4912062/1‑100 (MQ=255) gTTTTTACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCgg > 2:2311012/1‑100 (MQ=255) ttttACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtt < 2:275490/100‑1 (MQ=255) tACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGttttt > 2:1458172/1‑100 (MQ=255) tACGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGttttt < 1:4529597/100‑1 (MQ=255) aCGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtttttt > 2:1813725/1‑100 (MQ=255) cGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTc > 1:5411104/1‑100 (MQ=255) cGGGGACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTc > 1:1897047/1‑100 (MQ=255) gggACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTg > 1:485011/1‑100 (MQ=255) gggACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTg < 2:2912996/100‑1 (MQ=255) gggACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTg > 1:3413142/1‑100 (MQ=255) atctcAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGGCTCGCGGTTTTTTCTg < 1:2035338/96‑1 (MQ=255) gACAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCg < 2:5327505/100‑1 (MQ=255) cAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGGCTCGCGGTTTTTTCTgagat > 2:2013508/1‑96 (MQ=255) cAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCggg > 2:1067075/1‑98 (MQ=255) cAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgag < 1:3967299/100‑1 (MQ=255) cAGGATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgag < 2:5313366/100‑1 (MQ=255) gATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGTGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGAtc > 2:1383694/1‑99 (MQ=255) gATCGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGAtt < 2:2105750/100‑1 (MQ=255) cGTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTtct > 1:4248441/1‑100 (MQ=255) gTTCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTtctc < 1:3640258/100‑1 (MQ=255) tCCCGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTcac < 2:1269528/100‑1 (MQ=255) cccGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTcaca < 1:2467497/100‑1 (MQ=255) cccGACTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATGATAGACTCGCGGTTTTTTCTGCGAGATTTCTcaca > 2:5413647/1‑100 (MQ=255) cTCACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCCGTTTTTCCTGCGAGATTTCTCACAAAGcc > 1:5078312/1‑100 (MQ=255) cACTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCa < 1:4495982/100‑1 (MQ=255) aCTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaa > 2:336649/1‑100 (MQ=255) aCTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaa > 2:455886/1‑100 (MQ=255) aCTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaa > 2:588218/1‑100 (MQ=255) aCTCTGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaa > 2:1259343/1‑100 (MQ=255) | TTGTATGATTGAAATTAGCGGCCTATACTAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAA > NC_000913/1741166‑1741359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |