Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 111,051 IS1 (–) +9 bp coding (8‑16/390 nt) mutT → dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 19796 =NA (NA)157 (1.000) 98/198 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 111059 0 (0.000)coding (16/390 nt) mutT dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase
* ? NC_000913 = 20563NA (NA)161 (1.030) 93/198 0.4 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 111051 = 0 (0.000)coding (8/390 nt) mutT dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase

Only 100 of 161 total aligned reads displayed.

TTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTC  >  NC_000913/19697‑19892
                                                                                                   |                                                                                                
  gCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGt                                                                                                <  2:1584593/100‑1 (MQ=255)
  gCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGt                                                                                                <  1:2095602/100‑1 (MQ=255)
  gCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGt                                                                                                >  1:3609338/1‑100 (MQ=255)
   cccGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTa                                                                                               <  1:918568/100‑1 (MQ=255)
   cccGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTCCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTa                                                                                               <  2:3071096/100‑1 (MQ=255)
    ccGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTaa                                                                                              <  2:3579353/100‑1 (MQ=255)
     cGCTTGAGACATTGTTTCCGTATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGTGGATGCTGAAAAGAGTAGTAATTGCTGGTAAt                                                                                             <  1:3623510/100‑1 (MQ=255)
     cGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAAt                                                                                             <  1:1477969/100‑1 (MQ=255)
     cGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAAt                                                                                             <  1:2479681/100‑1 (MQ=255)
     cGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAAt                                                                                             <  1:2479422/100‑1 (MQ=255)
     cGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAAt                                                                                             <  1:1862843/100‑1 (MQ=255)
      gCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGGTTACTTCCTTCATGGGGATCCTGAAAAGAGTAGTGATTGCTGGTAATg                                                                                            <  1:3588918/100‑1 (MQ=255)
      gCTTGAGACATTGTTTACATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATg                                                                                            <  2:251678/100‑1 (MQ=255)
         tGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACt                                                                                         >  2:2620973/1‑100 (MQ=255)
         tGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACt                                                                                         >  2:1448135/1‑100 (MQ=255)
              cATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                    >  2:856189/1‑100 (MQ=255)
              cATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                    <  1:2347920/100‑1 (MQ=255)
              cATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                    >  1:1670083/1‑100 (MQ=255)
               aTTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACt                                                                                   <  1:3027578/100‑1 (MQ=255)
               aTTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACt                                                                                   >  2:475357/1‑100 (MQ=255)
                ttGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACtt                                                                                  <  1:1393762/100‑1 (MQ=255)
                  gTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAt                                                                                >  2:3277673/1‑100 (MQ=255)
                  gTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAt                                                                                <  1:2972840/100‑1 (MQ=255)
                   tttCCCTATCTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGAAGCTGAAAAGAGTCGTAATTGCTGGTAATGACTCCAACTTAtt                                                                               <  2:1178575/100‑1 (MQ=255)
                   tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAtt                                                                               <  2:301481/100‑1 (MQ=255)
                   tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAtt                                                                               <  2:681264/100‑1 (MQ=255)
                    ttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                              <  2:562452/100‑1 (MQ=255)
                     tCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGa                                                                             >  2:2913179/1‑100 (MQ=255)
                     tCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGa                                                                             <  1:2504662/100‑1 (MQ=255)
                     tCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGa                                                                             <  2:2833587/100‑1 (MQ=255)
                      ccATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGAt                                                                            >  1:780245/1‑100 (MQ=255)
                       cATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATa                                                                           >  1:157506/1‑100 (MQ=255)
                        atatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAg                                                                          <  2:726153/100‑1 (MQ=255)
                        atatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACACCAACTTATTGATAg                                                                          <  1:1466181/100‑1 (MQ=255)
                         tatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgt                                                                         >  1:1367459/1‑100 (MQ=255)
                            gTACGCGGGCGAATAAATAGAGGAATCGGATTACTTCCTTCATGGGGAGGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgtggt                                                                      >  2:3979636/1‑98 (MQ=255)
                             tACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                     >  2:1008573/1‑100 (MQ=255)
                             tACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                     <  2:3564150/100‑1 (MQ=255)
                               cgcgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTa                                                                   <  1:2793124/100‑1 (MQ=255)
                                gcgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTAt                                                                  >  2:3337054/1‑100 (MQ=255)
                                 cgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATg                                                                 >  1:2643709/1‑100 (MQ=255)
                                  gggCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                <  2:2155927/100‑1 (MQ=255)
                                  gggCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTCAAAAGAGTAGTAATTGCTCGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                <  1:3783686/100‑1 (MQ=255)
                                    gCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTc                                                              <  1:3609901/100‑1 (MQ=255)
                                     cGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                             <  1:4050308/100‑1 (MQ=255)
                                       aataaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                           >  1:1522254/1‑100 (MQ=255)
                                       aataaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                           >  2:2490907/1‑100 (MQ=255)
                                       aataaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                           <  2:2088963/100‑1 (MQ=255)
                                        ataaataGAGGAATCTGATTACTTCCTTCATGGGGGTGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt                                                          >  1:1634562/1‑100 (MQ=255)
                                        ataaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt                                                          >  2:2338741/1‑100 (MQ=255)
                                         taaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTCATTGATAGTGTTTTATGTTCAGATa                                                         >  2:2559255/1‑100 (MQ=255)
                                          aaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATaa                                                        >  1:3955318/1‑100 (MQ=255)
                                           aataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                       <  1:2173416/100‑1 (MQ=255)
                                           aataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                       >  1:2109324/1‑100 (MQ=255)
                                            ataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg                                                      >  2:230881/1‑100 (MQ=255)
                                                agGAATCTGATTACTTCCTTCATGGGGAGGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCg                                                  <  1:2659631/100‑1 (MQ=255)
                                                  gAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAt                                                >  1:2918146/1‑100 (MQ=255)
                                                   aaTCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTAATTGATAGTGTTTTATGTTCAGATAATGCCCGATg                                               >  2:598064/1‑100 (MQ=255)
                                                     tCTGGTTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                             >  2:3385518/1‑100 (MQ=255)
                                                       tGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACtt                                           <  2:2116214/100‑1 (MQ=255)
                                                         aTTACTTCCTGCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGGCTCCAACTGATTGATAGTGTTTTATGTTCAGAGAATGCCCGAGGACtgag                                         <  2:53082/100‑4 (MQ=25)
                                                          ttACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGt                                        <  2:1549045/100‑1 (MQ=255)
                                                           tACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTc                                       >  1:2905161/1‑100 (MQ=255)
                                                             cttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAt                                     >  2:3517757/1‑100 (MQ=255)
                                                             cttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAt                                     >  1:2919142/1‑100 (MQ=255)
                                                               tccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                   <  1:886270/100‑1 (MQ=255)
                                                                ccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                  >  1:1729923/1‑100 (MQ=255)
                                                                 cttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                 >  1:1076203/1‑100 (MQ=255)
                                                                  ttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGc                                >  1:845093/1‑100 (MQ=255)
                                                                  ttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGc                                >  1:750319/1‑100 (MQ=255)
                                                                   tcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCt                               >  1:818744/1‑100 (MQ=255)
                                                                     aTGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTcc                             <  2:2978400/100‑1 (MQ=255)
                                                                       ggggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                           >  1:445319/1‑100 (MQ=255)
                                                                        gggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCATATAATGCCCGATGACTTTGTCATGCAGCTCCAcc                          >  2:3816566/1‑100 (MQ=255)
                                                                        gggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAcc                          >  2:2004347/1‑100 (MQ=255)
                                                                        gggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAcc                          <  2:2744592/100‑1 (MQ=255)
                                                                          gATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAAAATGCCCGATGACTTTGTCATGCAGCTCCACCGa                        >  1:2148472/1‑100 (MQ=255)
                                                                            tGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtt                      >  1:1495318/1‑100 (MQ=255)
                                                                             gCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAttt                     <  1:1168084/100‑1 (MQ=255)
                                                                              cTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtttt                    >  1:500524/1‑100 (MQ=255)
                                                                               tGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTg                   <  1:610551/100‑1 (MQ=255)
                                                                               tGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTg                   <  1:2789502/100‑1 (MQ=255)
                                                                               tGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTg                   >  2:130962/1‑100 (MQ=255)
                                                                               tGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTg                   <  1:3400400/100‑1 (MQ=255)
                                                                                gAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTga                  >  2:1145548/1‑100 (MQ=255)
                                                                                   aaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGaa               <  1:389946/100‑1 (MQ=255)
                                                                                    agagTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAc              <  2:1496089/100‑1 (MQ=255)
                                                                                     gagTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACg             <  2:3902303/100‑1 (MQ=255)
                                                                                      agtagtAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGa            <  2:3920971/100‑1 (MQ=255)
                                                                                      agtagtAATTGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGa            >  2:3852428/1‑100 (MQ=255)
                                                                                         agtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAg         >  2:3399684/1‑100 (MQ=255)
                                                                                         agtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAg         >  2:1713190/1‑100 (MQ=255)
                                                                                          gtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGTAGCTCCACCGATTTTGAGAACGACAGc        >  1:454030/1‑100 (MQ=255)
                                                                                          gtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGc        >  1:1292387/1‑100 (MQ=40)
                                                                                          gtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGc        <  2:1952157/100‑1 (MQ=40)
                                                                                           taATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg       <  2:1803086/100‑1 (MQ=39)
                                                                                             aTTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAc     >  2:3293351/1‑100 (MQ=37)
                                                                                                gCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCGACCGATTTTGAGAACGACAGCGACtta  >  1:1636507/1‑99 (MQ=18)
                                                                                                gCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc  >  2:633212/1‑100 (MQ=33)
                                                                                                gCTGGTAATCACTCCAACTTATTGATAGTGTTTTATGTTCAGCTAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc  <  1:3556325/100‑1 (MQ=16)
                                                                                                   |                                                                                                
TTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTC  >  NC_000913/19697‑19892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.