BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2560906 =	151 (0.960)	19 (0.170) +TTTCTTTGCCTTAATTCCATGAATTCA	11/144	14.3	16.4%	intergenic (+8/‑462)	yffL/yffM	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
*	?	NC_000913	2560978 =	115 (0.730)	19 (0.170) +TTTCTTTGCCTTAATTCCATGAATTCA	11/144	14.3	16.4%	intergenic (+80/‑390)	yffL/yffM	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 151 total aligned reads displayed.

TTGTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGT  >  NC_000913/2560807‑2561003

ttgttgAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCa                                                                                                   <  2:2461493/100‑1 (MQ=255)

 tgttgAGCGTACTGAAGGCTATATACCAGGCTCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAg                                                                                                  >  2:599642/1‑100 (MQ=255)

  gttgAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATCATTCACGCCGTACAACATGAAATAACGGAATCAgg                                                                                                 >  2:1221924/1‑100 (MQ=255)

      aGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCggg                                                                                             <  1:733416/100‑1 (MQ=255)

       gCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGc                                                                                            >  2:3289955/1‑100 (MQ=255)

        cGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCa                                                                                           >  2:210717/1‑100 (MQ=255)

        cGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGCGCa                                                                                           >  2:2838024/1‑100 (MQ=255)

           aCTGAAGGCTGTATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATg                                                                                        <  2:3243815/100‑1 (MQ=255)

           aCTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATg                                                                                        >  1:794018/1‑100 (MQ=255)

             tGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGtt                                                                                      >  1:2185840/1‑100 (MQ=255)

              gAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCACTGTTc                                                                                     >  2:3016864/1‑100 (MQ=255)

              gAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTc                                                                                     >  2:2052210/1‑100 (MQ=255)

              gAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTc                                                                                     >  2:2658288/1‑100 (MQ=255)

               aaGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTcc                                                                                    <  2:830415/100‑1 (MQ=255)

               aaGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTcc                                                                                    <  1:1911047/100‑1 (MQ=255)

                aGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTccc                                                                                   >  2:2032735/1‑100 (MQ=255)

                 ggCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCg                                                                                  >  1:3615909/1‑100 (MQ=255)

                 ggCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCg                                                                                  <  2:1524759/100‑1 (MQ=255)

                  gCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGc                                                                                 >  2:2358228/1‑100 (MQ=255)

                  gCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGc                                                                                 >  2:2334807/1‑100 (MQ=255)

                  gCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGc                                                                                 <  2:515582/100‑1 (MQ=255)

                   cTATATACCAGGATCGGCGGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGcc                                                                                >  1:3405732/1‑100 (MQ=255)

                        taCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTc                                                                           >  2:1026605/1‑100 (MQ=255)

                         aCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCt                                                                          <  1:3957618/100‑1 (MQ=255)

                          ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                         >  2:1579976/1‑100 (MQ=255)

                          ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                         >  1:1108458/1‑100 (MQ=255)

                          ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                         >  2:2923303/1‑100 (MQ=255)

                          ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                         >  1:2600972/1‑100 (MQ=255)

                          ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                         >  1:1887104/1‑100 (MQ=255)

                           cAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCttt                                                                        >  1:4063353/1‑100 (MQ=255)

                            aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTg                                                                       <  2:2232563/100‑1 (MQ=255)

                            aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTg                                                                       <  2:3166661/100‑1 (MQ=255)

                             ggATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGc                                                                      <  1:924597/100‑1 (MQ=255)

                              gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGcc                                                                     <  1:237798/100‑1 (MQ=255)

                              gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGcc                                                                     <  2:2456351/100‑1 (MQ=255)

                               aTCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCt                                                                    <  2:1349578/100‑1 (MQ=255)

                                tCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCtt                                                                   <  2:2561238/100‑1 (MQ=255)

                                 cGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTa                                                                  >  2:210398/1‑100 (MQ=255)

                                   gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAAt                                                                <  1:2326099/100‑1 (MQ=255)

                                    cAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAAtt                                                               >  1:1664630/1‑100 (MQ=255)

                                      gAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTcc                                                             <  2:15457/100‑1 (MQ=255)

                                        aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCAt                                                           <  1:1540502/100‑1 (MQ=255)

                                        aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCAt                                                           >  2:2990006/1‑100 (MQ=255)

                                          gggAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGa                                                         >  2:256520/1‑100 (MQ=255)

                                            gAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAAt                                                       >  1:3322351/1‑100 (MQ=255)

                                             aGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGTCTTAACTCCATGAAtt                                                      <  1:3570171/100‑1 (MQ=255)

                                             aGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAAtt                                                      <  2:2760242/100‑1 (MQ=255)

                                                gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAg                                                   >  1:419090/1‑100 (MQ=255)

                                                gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAg                                                   >  1:2201663/1‑100 (MQ=255)

                                                gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCGTTTCTTTGCCTTAATTCCATGAATTCAg                                                   >  2:107501/1‑100 (MQ=255)

                                                 cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAgg                                                  <  1:2522469/100‑1 (MQ=255)

                                                 cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAgg                                                  >  1:1524121/1‑100 (MQ=255)

                                                   aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                <  1:2205279/100‑1 (MQ=255)

                                                   aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                <  1:2641811/100‑1 (MQ=255)

                                                   aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                >  2:3282675/1‑100 (MQ=255)

                                                   aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                <  1:1367672/100‑1 (MQ=255)

                                                   aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                >  2:547001/1‑100 (MQ=255)

                                                     gAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTggg                                              >  2:223272/1‑100 (MQ=255)

                                                      aaTACCAGTTATTATTCAAGCCGTACAACCTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGt                                             >  2:493271/1‑100 (MQ=255)

                                                       aTACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTc                                            <  2:688273/100‑1 (MQ=255)

                                                          ccAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCaaa                                         >  1:3369410/1‑100 (MQ=255)

                                                            aGTTATTATTCAAGCCGTACAACATGAAATAACGGTATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAg                                       <  2:856629/100‑1 (MQ=255)

                                                               tattatTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTg                                    >  1:3526254/1‑100 (MQ=255)

                                                               tattatTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATACAGGTGGGTCAAAAGTTg                                    <  2:48166/100‑1 (MQ=255)

                                                                attattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGc                                   <  1:2294668/100‑1 (MQ=255)

                                                                 ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                  <  2:741509/100‑1 (MQ=255)

                                                                 ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                  <  1:2999901/100‑1 (MQ=255)

                                                                 ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                  <  2:942390/100‑1 (MQ=255)

                                                                 ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                  >  1:3528439/1‑100 (MQ=255)

                                                                   attCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCGTGAATTCAGGTGGGTCAAAAGTTGCCGt                                >  2:608417/1‑100 (MQ=255)

                                                                   attCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                <  1:2843028/100‑1 (MQ=255)

                                                                   attCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGt                                >  1:305192/1‑100 (MQ=255)

                                                                    ttCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTGAGGTGGGTCAAAAGTTGCCGtt                               >  1:1735390/1‑100 (MQ=255)

                                                                     tCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                              >  1:3433653/1‑100 (MQ=255)

                                                                      cAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAg                             >  2:3446607/1‑100 (MQ=255)

                                                                       aaGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgt                            >  1:3924634/1‑100 (MQ=255)

                                                                         gCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                          <  2:371905/100‑1 (MQ=255)

                                                                         gCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                          <  2:3010468/100‑1 (MQ=255)

                                                                          ccGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggt                         <  2:1458626/100‑1 (MQ=255)

                                                                           cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                        <  1:217856/100‑1 (MQ=255)

                                                                             tACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTggg                      <  1:3996819/100‑1 (MQ=255)

                                                                             tACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTggg                      >  1:2424488/1‑100 (MQ=255)

                                                                             tACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTggg                      >  1:2746166/1‑100 (MQ=255)

                                                                                 acaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATAGCAGGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaa                  >  2:3809095/1‑100 (MQ=255)

                                                                                  caTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaa                 >  1:424961/1‑100 (MQ=255)

                                                                                  caTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaa                 >  2:1634811/1‑100 (MQ=255)

                                                                                   aTGAAATACCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                <  1:3890519/100‑1 (MQ=255)

                                                                                    tGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg               >  1:2787430/1‑100 (MQ=255)

                                                                                    tGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTAGGTCAAAAGTTGCCGTTAGTGGTGGGTCCAAAg               <  2:1808680/100‑1 (MQ=255)

                                                                                     gAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGt              >  1:1292706/1‑100 (MQ=255)

                                                                                     gAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGCTAGTGGTGGGTCAAAAGt              >  1:1034445/1‑100 (MQ=255)

                                                                                       aaTAACGGAATCAGGCGGGCAATGTTCCTGCCGTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGATAGTGGTGGGTCAAAAGtgg            <  2:2692686/100‑3 (MQ=39)

                                                                                        aTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc           <  1:896615/100‑1 (MQ=255)

                                                                                        aTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc           >  1:2866524/1‑100 (MQ=255)

                                                                                        aTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc           <  1:3989826/100‑1 (MQ=255)

                                                                                         tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGcc          <  1:2967655/100‑1 (MQ=255)

                                                                                          aaCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCg         >  2:1927108/1‑100 (MQ=255)

                                                                                             ggAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTa      <  1:2297330/100‑1 (MQ=255)

                                                                                              gAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTaa     >  2:3364479/1‑100 (MQ=255)

                                                                                                 tCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGt  <  1:307018/100‑1 (MQ=255)

TTGTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGT  >  NC_000913/2560807‑2561003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.