New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4040640 =189 (1.200)47 (0.350) 20/170 12.0 22.5% intergenic (+4/+266) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
?NC_000913 4040684 = NA (NA)intergenic (+48/+222) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 160 total aligned reads displayed.

GCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGG  >  NC_000913/4040585‑4040759
                                                                                                   |                                                                           
gcCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCCAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCCTCCGTTTTATc                                                                             >  2:486048/1‑100 (MQ=255)
gcCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATc                                                                             <  2:448678/100‑1 (MQ=37)
gcCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATc                                                                             <  2:3261351/100‑1 (MQ=39)
gcCGACGGTAGTGAGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATc                                                                             <  2:3721782/100‑1 (MQ=255)
   gATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgt                                                                          <  1:1305930/100‑1 (MQ=39)
   gATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgt                                                                          >  2:1978963/1‑100 (MQ=38)
     tGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgttg                                                                        <  2:2004884/100‑1 (MQ=38)
     tGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgttg                                                                        <  1:21287/100‑1 (MQ=38)
       gTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTgttgtt                                                                      <  1:745711/100‑1 (MQ=39)
       gTAGGGTGGGGTCTCCTAATGCGAGAGTAGGGAACTGCGAGGCATCAAATACAACGAAAACCTCAGTCGGAAGACGGGGCCTTTCGGTTCATCtgtagat                                                                      >  2:883046/1‑96 (MQ=11)
         aGTGTGGGGTCTGCTAATGCGAGAGTAAGGAACTGCCATGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGACCTTTCGTTATATCTGttgtttg                                                                    <  2:2920940/100‑1 (MQ=11)
          gtgtGGGGTCTCCTCATGCGAGAGTAGGGAACTGTCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGttgtttgt                                                                   >  2:306725/1‑100 (MQ=255)
          gtgtGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGttgtttgt                                                                   >  2:2934237/1‑100 (MQ=39)
           tgtgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTc                                                                  >  1:347922/1‑100 (MQ=39)
           tgtgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTc                                                                  <  2:3560548/100‑1 (MQ=38)
            gtgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCg                                                                 <  2:1003679/100‑1 (MQ=39)
             tgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCgg                                                                <  1:2466708/100‑1 (MQ=39)
             tgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCgg                                                                <  1:414705/100‑1 (MQ=39)
               gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTg                                                              <  1:1635332/100‑1 (MQ=39)
               gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTg                                                              >  1:2606397/1‑100 (MQ=39)
                  tctcCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAc                                                           <  1:486902/100‑1 (MQ=39)
                  tctcCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAc                                                           <  1:293693/100‑1 (MQ=39)
                  tctcCTCATGCAAGAGGAGGGATCCGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCTTTTTATATGTTGTTTGTCGCTGAAc                                                           <  2:1686834/100‑1 (MQ=11)
                   ctcctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACg                                                          >  1:1513885/1‑100 (MQ=38)
                   ctcctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACg                                                          <  2:3922656/100‑1 (MQ=39)
                   ctcctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACg                                                          >  1:3408485/1‑100 (MQ=38)
                     cctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCATTTTAGCTGTTGTTTGTCGGTGAACGct                                                        >  1:3716345/1‑100 (MQ=255)
                      ctcATGTGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                       >  2:438885/1‑100 (MQ=37)
                      ctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                       >  2:2244526/1‑100 (MQ=37)
                      ctcATGCGAGAGCAGGGCACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTATAGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                       >  2:2155007/1‑100 (MQ=11)
                        cATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCtctc                                                     >  2:3454030/1‑100 (MQ=34)
                         aTGCGTGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAATGCTCAGTCGGAAGACTTGCCCTTTCGTTTTATCTGTTGTTTGTCGGTGATCGCTCTcc                                                    <  2:939644/100‑1 (MQ=11)
                         aTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTcc                                                    <  1:3131028/100‑1 (MQ=34)
                           gCGAGAGTAGGGAACTGCCAGGCATCAAATAAACCGAAAGGCTCAGTCGGAAGACTGGCCCTTTCGTTTTATCTGTTGTTTGTCGGCGAACGCTCCCCTg                                                  >  2:3305236/1‑100 (MQ=11)
                           gCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTg                                                  <  1:2833738/100‑1 (MQ=34)
                           gCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTg                                                  <  2:1061586/100‑1 (MQ=34)
                             gagaGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAg                                                <  2:2847669/100‑1 (MQ=34)
                              agagTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGt                                               <  1:3772319/100‑1 (MQ=34)
                               gagTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGtc                                              >  2:3776005/1‑99 (MQ=18)
                                agTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAg                                             <  2:2345735/100‑1 (MQ=34)
                                agTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAg                                             <  1:1108556/100‑1 (MQ=34)
                                agTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAg                                             >  1:1858009/1‑100 (MQ=33)
                                 gTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAgg                                            >  1:2624186/1‑100 (MQ=34)
                                 gTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGCCCGACGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAgg                                            <  2:3825520/100‑1 (MQ=255)
                                  tAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGa                                           >  1:3773851/1‑100 (MQ=34)
                                   aGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAc                                          <  1:3832881/100‑1 (MQ=34)
                                   aGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAc                                          >  2:1715322/1‑100 (MQ=33)
                                   aGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAc                                          >  1:2311020/1‑100 (MQ=34)
                                    gggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACa                                         >  2:2769075/1‑100 (MQ=34)
                                    gggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACa                                         >  2:52524/1‑100 (MQ=34)
                                    gggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACa                                         >  2:3313544/1‑100 (MQ=34)
                                    gggAACTGCCAGGCACCAAATAAAACGAAAGGCTCAGTCGGAAGACCAGCCCTATCGTTTTATCTGTTAATTGTCGGTGAACGCTCTCCTGAGTacgtca                                         >  2:3246913/1‑95 (MQ=11)
                                    ccgatcTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACa                                         <  1:2712988/95‑1 (MQ=16)
                                       aaCTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt                                      <  1:960182/100‑1 (MQ=34)
                                         cTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATcc                                    >  2:1571034/1‑100 (MQ=34)
                                            ccAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgcc                                 <  1:2183744/100‑1 (MQ=34)
                                             cAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgccg                                >  1:541534/1‑100 (MQ=34)
                                             cAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgccg                                <  1:2909527/100‑1 (MQ=34)
                                               ggCATCAAATAAACCGAAAGGCTCAGTCGGAAGCCTGGGCCTTTCGTTTGATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCggg                              <  1:3672869/100‑1 (MQ=255)
                                                gCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGa                             >  2:1428438/1‑100 (MQ=34)
                                                 cATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAg                            <  1:3107002/100‑1 (MQ=34)
                                                 cATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAg                            >  1:1102999/1‑100 (MQ=34)
                                                 cATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAg                            <  2:127525/100‑1 (MQ=34)
                                                  aTCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTCGGACAAATCCGCCGGGAGc                           >  1:868260/1‑100 (MQ=18)
                                                  aTCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTATTATCAGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGc                           >  1:523215/1‑100 (MQ=16)
                                                    cAAATAAAACGAGAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCgg                         <  2:1667416/100‑1 (MQ=21)
                                                    cAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCgg                         >  2:571940/1‑100 (MQ=33)
                                                     aaaTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGa                        >  1:3746553/1‑100 (MQ=34)
                                                     aaaTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGa                        >  1:1159090/1‑100 (MQ=34)
                                                      aaTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGCGTAGGACAAATCCGCCGGGAGCGGac                       >  2:2517655/1‑99 (MQ=21)
                                                      aaTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAt                       >  1:2065113/1‑100 (MQ=34)
                                                       aTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAtt                      >  1:2071689/1‑100 (MQ=34)
                                                        tAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                     >  1:2975698/1‑100 (MQ=33)
                                                         aaaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTg                    >  1:854041/1‑100 (MQ=34)
                                                         aaaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTg                    <  2:231642/100‑1 (MQ=33)
                                                         aaaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTg                    >  1:104095/1‑100 (MQ=34)
                                                           aaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGaa                  >  1:3278646/1‑100 (MQ=34)
                                                           aaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGaa                  <  2:3129273/100‑1 (MQ=34)
                                                            aCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTCATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                 <  1:3843546/100‑1 (MQ=18)
                                                            aCGAAAGGCTCAGTCGGAAGACTGGACCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                 <  2:62347/100‑1 (MQ=18)
                                                             cGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACg                <  1:352424/100‑1 (MQ=34)
                                                             cGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACg                <  1:2555456/100‑1 (MQ=34)
                                                             cGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACg                >  1:3984853/1‑100 (MQ=34)
                                                              gAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGt               <  2:695604/100‑1 (MQ=34)
                                                              gAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGt               <  1:2588285/100‑1 (MQ=34)
                                                                aaGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTg             >  1:1067322/1‑100 (MQ=34)
                                                                 aGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGc            <  1:3699109/100‑1 (MQ=34)
                                                                  ggCTCAGTCGGAAGACTGGGCCTTTCGATTTATCTGTTGTTTGTCGGTGAACGCTCTCCTAAGTACAACAAATCCGCCGGGAGCGGATTTGAACGTTGCg           >  2:1621030/1‑100 (MQ=11)
                                                                   gCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGa          >  1:2551463/1‑100 (MQ=34)
                                                                   gCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGa          >  1:120336/1‑100 (MQ=34)
                                                                    cTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGaa         >  2:1247985/1‑100 (MQ=34)
                                                                     tCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAg        >  1:2750554/1‑100 (MQ=34)
                                                                      cattCGGAAGACAGGGCCTTTCGCTTTAACCGTAGTTTGACGGTGAACGCTCTCCTGAGACTGACAACTACGCCGGGTGCGGATTGGAACGTTGCGAAGc       >  2:3077548/4‑100 (MQ=2)
                                                                       aGTCGGAGGACTGGGCCTTTCTGTTTATCTGTTGTTTGGGGGGGAACGCTCTCCGAAGAAGGAAAGATCCGCCGGGAGCGGATTTGAACTTTTCGAAGCa      <  2:1337980/100‑1 (MQ=2)
                                                                         tCGGAAGAGTGGGCCTTTCGTTTTATCTGTTGTTGGGCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCAGGGAGCGGATTTGAACGTTGCGAAGCAAc    <  2:235338/100‑1 (MQ=11)
                                                                         tCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc    <  1:346031/100‑1 (MQ=34)
                                                                         tCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc    <  2:849859/100‑1 (MQ=33)
                                                                          cGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg   >  1:2481404/1‑100 (MQ=33)
                                                                          cGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg   >  2:1819014/1‑100 (MQ=33)
                                                                           ggAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg  >  1:3638066/1‑100 (MQ=32)
                                                                                                   |                                                                           
GCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGG  >  NC_000913/4040585‑4040759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.