| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,154,851 | T→G | L279R (CTA→CGA) | mdtA → | multidrug efflux system, subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,154,851 | 0 | T | G | 87.8% | 432.9 / 48.4 | 165 | L279R (CTA→CGA) | mdtA | multidrug efflux system, subunit A |
| Reads supporting (aligned to +/- strand): ref base T (13/7); new base G (70/74); total (83/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.92e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
CCGTAGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAACG > NC_000913/2154755‑2154946 | cGTAGTGCAGGCGCAGAAAGCCGGAAAACCGCAGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATAAAGTGAAGGCACGCTGTTAAGTAGAGAt > 2:3296650/1‑100 (MQ=255) gTAGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATa < 2:36030/100‑1 (MQ=255) aGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGGACCAACTCGAAGAAATTAAGGGAAGGCACGCTGTTAAGTCGAGATAAc < 2:3976044/100‑1 (MQ=255) aGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAc < 2:646984/100‑1 (MQ=255) aGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAc > 2:3664699/1‑100 (MQ=255) aGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAc < 1:1366120/100‑1 (MQ=255) aGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGCATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAc < 1:757214/100‑1 (MQ=255) gTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGACGAGATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAcc > 1:1282141/1‑100 (MQ=255) gTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAcc > 1:1793369/1‑100 (MQ=255) gTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAAcc > 1:1179939/1‑100 (MQ=255) gCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCaa > 2:1105359/1‑100 (MQ=255) cAGGCGCAGAAAGCCGGAAAACCACGGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTTAAGGCACGCTGTTAAGTCGAGATAACCaaa > 1:3888000/1‑100 (MQ=255) ggCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATc < 2:2809200/100‑1 (MQ=255) cgcAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGa < 1:1086965/100‑1 (MQ=255) gcAGAAAGCCGGAAAACCGCTGGGGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGAt < 2:320940/100‑1 (MQ=255) cAGGAAGACGGAAAACCGAAGGTGGGAGGAGCCTGGGATGGGACAAAATGGAAAAAATTGAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATg < 2:3288171/100‑1 (MQ=255) cAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATg < 2:1686600/100‑1 (MQ=255) cAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATg < 1:3444096/100‑1 (MQ=255) aGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGc < 2:1995494/100‑1 (MQ=255) gAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGcc < 1:694244/100‑1 (MQ=255) gAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAAGCACGCTGTTAAGTCGAGATAACCAAATCGATGcc > 2:3230651/1‑100 (MQ=255) aaaGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCa > 1:3293744/1‑100 (MQ=255) aaGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCAc > 1:2261686/1‑100 (MQ=255) aGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGACACt < 2:3381069/100‑1 (MQ=255) gCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTa > 1:4068792/1‑100 (MQ=255) ccGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCACCTCGAAGAAATTAAGTGAAGGCACGCCGTTAAGTCTAGATAACCAAATCGATGCCACTAc > 2:3039647/1‑100 (MQ=255) cGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTAcc < 2:3240798/100‑1 (MQ=255) ggAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCg > 1:2230753/1‑100 (MQ=255) ggAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCg < 1:3643842/100‑1 (MQ=255) gAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCgg > 1:2431443/1‑100 (MQ=255) aaaaCCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGt > 1:1854799/1‑100 (MQ=255) aaaaCCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGt < 1:2925150/100‑1 (MQ=255) aaCCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTAc > 2:2152318/1‑100 (MQ=255) aCCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACg < 2:1731587/100‑1 (MQ=255) ccGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGa > 2:3522972/1‑100 (MQ=255) cGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGAt > 1:1923307/1‑100 (MQ=255) cGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGAt < 1:3362812/100‑1 (MQ=255) cGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGAt < 1:2771601/100‑1 (MQ=255) cGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGACACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGAt > 1:2896325/1‑100 (MQ=255) cTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTa < 1:704537/100‑1 (MQ=255) ggtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTaaa > 1:2297534/1‑100 (MQ=255) ggtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTaaa > 1:626589/1‑100 (MQ=255) ggtggtAGAAGCCTGGGATCGCACCAACGCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTaaa < 1:213292/100‑1 (MQ=255) gtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAg < 1:978220/100‑1 (MQ=255) gtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAg < 2:2293384/100‑1 (MQ=255) gtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAg < 2:2934041/100‑1 (MQ=255) gtggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAg > 1:1839730/1‑100 (MQ=255) ctggtAAAATCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATTACCAAATCGATGCCACTACCGGTACGATTAAAg < 2:3316140/99‑1 (MQ=255) ggtAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTg > 1:3449395/1‑100 (MQ=255) ggtAGAAGCCTGAGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTg < 2:586522/100‑1 (MQ=255) tAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGaa > 2:1700616/1‑100 (MQ=255) gCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCAc > 1:2190872/1‑100 (MQ=255) gggATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCtt > 1:1463028/1‑100 (MQ=255) ggATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCttt < 1:1606501/100‑1 (MQ=255) ggATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCttt > 2:1238619/1‑100 (MQ=255) gATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACCACCGGTACGATTAAAGTGAAAGCACGCTTta > 1:3554039/1‑100 (MQ=255) tCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTtaat < 2:1093666/100‑1 (MQ=255) gCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTtaataa > 2:3351720/1‑100 (MQ=255) gCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTtaataa > 2:1443195/1‑100 (MQ=255) gCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCGTtaataa > 2:746590/1‑100 (MQ=255) aCCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATc < 1:1257120/100‑1 (MQ=255) ccAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCa < 2:969244/100‑1 (MQ=255) cAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAg > 1:2479470/1‑100 (MQ=255) cAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAg < 2:2521809/100‑1 (MQ=255) aaCTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAgg > 1:2398582/1‑100 (MQ=255) cTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgat > 2:2346584/1‑100 (MQ=255) cTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgat > 2:467603/1‑100 (MQ=255) tCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgatg > 1:1507057/1‑100 (MQ=255) tCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgatg < 2:2893983/100‑1 (MQ=255) cGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgatga > 2:1047490/1‑100 (MQ=255) gaagaaATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgatgat > 1:1994038/1‑100 (MQ=255) gaagaaATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGgatgat > 2:2314909/1‑100 (MQ=255) aagaaATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGatgatg > 1:2339141/1‑100 (MQ=255) aagaaATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGatgatg > 1:394019/1‑100 (MQ=255) agaaATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATgc > 2:3159451/1‑100 (MQ=255) agaaATTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTCAAAGCACGCTCTAATAATAAGGATGATgc > 2:2151594/1‑100 (MQ=255) aaaTTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATgcgc > 1:543488/1‑100 (MQ=255) aaTTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCt > 2:72760/1‑100 (MQ=255) aTTAAGTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTg < 1:3330571/100‑1 (MQ=255) aGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTc > 1:2364146/1‑100 (MQ=255) gTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTcc < 2:549443/100‑1 (MQ=255) gTGAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTcc < 2:2574414/100‑1 (MQ=255) gAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCa < 1:1069366/100‑1 (MQ=255) gAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCa > 2:2100159/1‑100 (MQ=255) gAAGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCa < 2:1447271/100‑1 (MQ=255) aaGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCaa < 2:2494523/100‑1 (MQ=255) aaGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCaa < 2:1962713/100‑1 (MQ=255) aaGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCaa < 2:1157209/100‑1 (MQ=255) aGGCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAAt > 2:2769749/1‑100 (MQ=255) ggCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATc > 1:2326658/1‑100 (MQ=255) ggCACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATc < 1:1717071/100‑1 (MQ=255) cACGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAg < 1:965149/100‑1 (MQ=255) aCGCTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGt > 2:831695/1‑100 (MQ=255) cTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCATTCAGTTTg < 2:3830138/100‑1 (MQ=255) cTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTg < 1:3850419/100‑1 (MQ=255) cTGTTAAGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTg < 2:1513383/100‑1 (MQ=255) ttAAGTCGAGATAATCAAATCGATGCCACTACCGGTACGATGAAAGTGAAAGCATGCTTTAATACTCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTa < 2:3907567/100‑1 (MQ=255) aaGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGATAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTatc > 2:1193504/1‑98 (MQ=255) aGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAAcg < 2:2394121/100‑1 (MQ=255) aGTCGAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAAcg > 2:1207064/1‑100 (MQ=255) | CCGTAGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAACG > NC_000913/2154755‑2154946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |