| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,056,034 | A→C | noncoding (52/183 nt) | ssrS → | 6S RNA inhibits RNA polymerase promoter binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,056,034 | 0 | A | C | 90.1% | 521.9 / 33.8 | 182 | noncoding (52/183 nt) | ssrS | 6S RNA inhibits RNA polymerase promoter binding |
| Reads supporting (aligned to +/- strand): ref base A (13/5); new base C (81/83); total (94/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.31e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
ATGACACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGAACCAAGGGT > NC_000913/3055938‑3056128 | aTGACACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTGTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCca < 2:3934502/100‑1 (MQ=255)aTGACACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCca < 1:3138355/100‑1 (MQ=255) tGACACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCcac > 1:3702439/1‑100 (MQ=255) tGACACTTTTCGGTTTACGGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCcac < 2:3542891/100‑1 (MQ=255) acacTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACaa > 1:375001/1‑100 (MQ=255) acacTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACaa > 2:2676219/1‑100 (MQ=255) cTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGaa > 2:3318906/1‑100 (MQ=255) tttCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAAtg > 1:143723/1‑100 (MQ=255) tttCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAAtg < 1:1609592/100‑1 (MQ=255) cgttttACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTgg < 2:1826431/97‑1 (MQ=255) cGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTgg < 1:401336/100‑1 (MQ=255) cGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTgg < 1:2792777/100‑1 (MQ=255) cGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTgg < 1:3128083/100‑1 (MQ=255) ggTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGgc > 1:1734724/1‑100 (MQ=255) ggTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGgc > 1:2260495/1‑100 (MQ=255) ggTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGgc < 2:771940/100‑1 (MQ=255) gTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCACCTGAGCCGATATTTCATCCCACAAGAATGTGgcg > 2:720215/1‑100 (MQ=255) tACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTc > 1:1005988/1‑100 (MQ=255) aCTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGAGGTTCGCAAGCGGGCCAGTCTCCTGAGCCCATATTTTATCCCACAAGATTGTGGCGCTcc > 2:1537140/1‑100 (MQ=255) cTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCcg > 1:2559836/1‑100 (MQ=255) cTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCcg > 1:18788/1‑100 (MQ=255) tgtgGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCcgc < 2:1584290/100‑1 (MQ=255) tgtgGTAGAGTAACCGTGAAGACAAAATCTCTCTGAGCTGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCcgc > 2:3457813/1‑100 (MQ=255) ggTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGt < 1:2251873/100‑1 (MQ=255) tAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGCCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTg < 2:252429/100‑1 (MQ=255) tAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGACCAGTCCCCTGAGCCGATATTTCATCCCACAAGACTGAGGCGCTCCGCGGTTg < 2:3886344/100‑1 (MQ=255) agagTAGCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTgg < 1:2917703/100‑1 (MQ=255) agagTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTgg < 1:3189772/100‑1 (MQ=255) gagTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGt > 2:130989/1‑100 (MQ=255) gagTAACCGTGAAGACAAAATTACTCTGAGAGGTTCACAAGCGCACCAGTCCCCTGAGCCCATACTTCACCCCCCAGGACTGTGACCCTCCGCCGTTGGt > 2:1434167/1‑100 (MQ=255) agTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTg < 1:2189036/100‑1 (MQ=255) gTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGa > 2:327185/1‑100 (MQ=255) gTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGa < 2:1833641/100‑1 (MQ=255) gTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGa > 2:2410190/1‑100 (MQ=255) gTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGa > 1:2659646/1‑100 (MQ=255) gTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGa < 2:691981/100‑1 (MQ=255) aCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCa < 1:2110508/100‑1 (MQ=255) aCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCa < 1:3432285/100‑1 (MQ=255) aCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCa < 1:262762/100‑1 (MQ=255) aCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCa < 1:2205070/100‑1 (MQ=255) aCCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCa < 2:307970/100‑1 (MQ=255) ccGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCAt < 1:2371033/100‑1 (MQ=255) gTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGc > 1:3715408/1‑100 (MQ=255) tGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCt > 1:1435320/1‑100 (MQ=255) gAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCGGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTc < 1:3958929/100‑1 (MQ=255) gAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTc < 1:1932848/100‑1 (MQ=255) aaGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACCAGAATGTGGCGCTCCGCGGTTGGTGAGCCTGCTCg > 2:38601/1‑100 (MQ=255) aaGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCg < 1:133213/100‑1 (MQ=255) aGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCgg > 1:1747523/1‑100 (MQ=255) aGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCgg > 2:1760066/1‑100 (MQ=255) aCAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGgtc > 1:2080675/1‑100 (MQ=255) aCAAAATTTCTCTGAGATGGTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGgtc < 2:3167314/100‑1 (MQ=255) cAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGgtcc > 1:513891/1‑100 (MQ=255) cAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGgtcc > 2:2759133/1‑100 (MQ=255) ttCTCTGAGATGTTCGCAAGCGGGCCATTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCga < 2:3736276/100‑1 (MQ=255) gagaTGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGcc > 1:1567002/1‑100 (MQ=255) gagaTGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGcc < 1:2406007/100‑1 (MQ=255) aTGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCGCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTa > 1:824368/1‑100 (MQ=255) tGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTaa < 2:2520601/100‑1 (MQ=255) tGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTaa > 2:886276/1‑100 (MQ=255) tGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTaa > 2:49321/1‑100 (MQ=255) gTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCGCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTaaa > 2:3071429/1‑100 (MQ=255) gTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGATGCCTTaaa < 2:3836648/100‑1 (MQ=255) tCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAAc < 1:1047267/100‑1 (MQ=255) cGCACGCTGGCAAGTCCCCCAAGCCCATCTTCCATCCCACAAGAATCTGACGCTCCGCGGTTGGTGAGCATGCCCGGTTCGTCCGAGAGACCTAAACACt < 2:58846/100‑1 (MQ=255) cGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACt > 2:3799782/1‑100 (MQ=255) ncAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTg > 1:463315/2‑100 (MQ=255) cAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGc < 1:1138533/100‑1 (MQ=255) cAAGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGc < 1:1162896/100‑1 (MQ=255) aaGCGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGcg < 1:587599/100‑1 (MQ=255) gCGGGCCAGTCCCCGGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGcgac < 2:2302710/100‑1 (MQ=255) cGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGcgacg < 1:860102/100‑1 (MQ=255) cGGGCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGcgacg < 2:2788134/100‑1 (MQ=255) gggCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGcgacga > 1:738823/1‑100 (MQ=255) ggCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCCTGCTCGGTCCGTCCGAGAAGCCTTCAAACTGCgacgac > 2:2746762/1‑100 (MQ=255) ggCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCgacgac > 2:1032612/1‑100 (MQ=255) ggCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCgacgac < 2:966582/100‑1 (MQ=255) gCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGaca < 1:1490817/100‑1 (MQ=255) gCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGaca < 1:2345594/100‑1 (MQ=255) gCCAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGaca < 1:385950/100‑1 (MQ=255) gCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGaca > 2:302113/1‑100 (MQ=255) ccAGTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGacac > 2:3014592/1‑100 (MQ=255) aGTCCCCTGAGCCGATATTTCATCCCACAAGAATGCGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAGGCGTCACATCTGCGACGACACAt > 2:3150458/1‑100 (MQ=255) gTCCCCTGCGCCGATAATTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCCTGCTCTGGCCGTCCGAGAAGCCTTACAACTGCGACGAcacaat > 2:192553/1‑98 (MQ=255) gTCCCCTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACAtt > 1:4001287/1‑100 (MQ=255) gTCCCCTGAGCCGATAGTTCATACCACAAGAATGTGGCGCCCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGCAGCCTTAAACCTGCGACGACACAtt > 2:3280034/1‑100 (MQ=255) ccccTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCa < 1:2427950/100‑1 (MQ=255) cccTGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCAc > 1:2847226/1‑100 (MQ=255) tcTGAGACGATAATTCATACCACAAGAATGCGGCGCTGCGCGGTTGGTGAGCATGCTCGTTAAGTCCGAGAATCCTTAAAACTGCGCTGTCACATTTAca > 2:847285/2‑99 (MQ=255) tGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCtt < 1:4070838/100‑1 (MQ=255) tGAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCtt < 1:2717517/100‑1 (MQ=255) gAGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTg < 2:1188874/100‑1 (MQ=255) aGCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGa > 1:949501/1‑100 (MQ=255) gCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGaa > 1:2654916/1‑100 (MQ=255) gCCGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGaa > 2:1174619/1‑100 (MQ=255) ccGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGAAc > 2:3163539/1‑100 (MQ=255) cGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGAAcc > 1:2493551/1‑100 (MQ=255) cGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGAAcc < 1:2447875/100‑1 (MQ=255) cGATATTTCATCCCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGGCCGAGAAGCCTGAAAACTGCGACGACACATTCACCTTGAAcc > 2:3771788/1‑100 (MQ=255) gATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGACGCCTTAAAACTGCGACGACACATTCACCTTGAACca > 2:3245540/1‑100 (MQ=255) | ATGACACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAGCCGATATTTCATACCACAAGAATGTGGCGCTCCGCGGTTGGTGAGCATGCTCGGTCCGTCCGAGAAGCCTTAAAACTGCGACGACACATTCACCTTGAACCAAGGGT > NC_000913/3055938‑3056128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |