| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,363,167 | T→G | L121V (TTA→GTA) | yhcD → | putative outer membrane fimbrial subunit usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,363,167 | 0 | T | G | 95.1% | 593.3 / 8.1 | 187 | L121V (TTA→GTA) | yhcD | putative outer membrane fimbrial subunit usher protein |
| Reads supporting (aligned to +/- strand): ref base T (8/1); new base G (94/82); total (102/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
GGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTG > NC_000913/3363070‑3363263 | gCATTTCTGCACCAAGCCGGTTTAAAAATTCGTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTAc < 1:2440830/100‑1 (MQ=255) cagttCTGCAACAAGCCGGTTTAAAAATTAAAAAAAAAAAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTAcc < 2:3616108/97‑1 (MQ=255) cATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTAcc < 2:300750/100‑1 (MQ=255) aTTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCt > 1:1145163/1‑100 (MQ=255) tttCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTa > 1:3441135/1‑100 (MQ=255) cTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAGAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAAcc > 2:40614/1‑100 (MQ=255) cTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAAcc > 2:42474/1‑100 (MQ=255) caacaaGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAgg < 1:1804230/100‑1 (MQ=255) taaGTCGGTGTAAAAATTCCTTCTGAAGAAAAAAAGGGGTGTTACGATTATATATTGTCCTACCCGGGTATCACAATCACACCAGTACCTAACCAGGAAg < 2:892519/99‑1 (MQ=255) aaGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGc > 1:1488654/1‑100 (MQ=255) gCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGt > 2:2277587/1‑100 (MQ=255) ccGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGGACCTAGCCAGGAAGCGtt < 2:3352852/100‑1 (MQ=255) ggTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAg > 2:2126667/1‑100 (MQ=255) ggTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAg < 1:1504631/100‑1 (MQ=255) tttAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACACGGGTACCACAATCACACCAGTACCTACCCAGGACGCGTTAGat > 2:1936903/1‑100 (MQ=255) ttAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGata < 2:575140/100‑1 (MQ=255) ttAAAAATTCCTACTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGata > 1:3517003/1‑100 (MQ=255) aaTTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATc < 1:3170400/100‑1 (MQ=255) aTTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCg < 2:2472837/100‑1 (MQ=255) ccTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGttt > 1:1754880/1‑100 (MQ=255) ccTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGttt < 2:1106616/100‑1 (MQ=255) ttCTGAAGAAAAAAATGGCTGTTGCGACTATATATTGTCCTACGCGGGTATCACAATCACACCAGTACCTGACCAGGAAGCGTTAGTTATTACCGTTTca < 2:3299384/100‑1 (MQ=255) ttCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGGTAGATATTATCGTTTca > 1:190041/1‑100 (MQ=255) tCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTACTACCCGGGTACCTCAATCACCCCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTcac < 2:3628582/100‑1 (MQ=255) cTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTcacc > 1:1954260/1‑100 (MQ=255) tGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTcacca < 2:143491/100‑1 (MQ=255) gaagaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTcaccac > 1:3826003/1‑100 (MQ=255) aagaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACcaca > 2:1244953/1‑100 (MQ=255) agaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAg > 1:3334705/1‑100 (MQ=255) gaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAgg < 2:3245591/100‑1 (MQ=255) gaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAgg > 1:410800/1‑100 (MQ=255) gaaAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAAGCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAgg > 1:705370/1‑100 (MQ=255) aaaaaaaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATGACACCACTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGc < 1:3955001/100‑1 (MQ=255) aaaaaaaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAgcc > 2:225441/1‑98 (MQ=255) aaaaaaaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGc < 1:398506/100‑1 (MQ=255) aaaaaaaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGc < 2:293747/100‑1 (MQ=255) aaaaaaaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAAATATTATCGTTTCACCACAGGc < 2:1095007/100‑1 (MQ=255) aaaaaaaTGGCTGTTACGACTATACAGTGTCCTACCCGGGAACCACAACCCCACCAGCACCTAACCAGGAAGCGATAGATATTATCGTTTCACCACAGGc > 2:1774808/1‑100 (MQ=255) aaTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGGTATTATCGTTTCACCACAGGCGATCa < 2:601123/100‑1 (MQ=255) cgatcTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCAt < 2:2035724/96‑1 (MQ=255) aTGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCAt > 1:1603216/1‑100 (MQ=255) gCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTcc < 1:3393494/100‑1 (MQ=255) cTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTccc > 1:2609446/1‑100 (MQ=255) gTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCAt > 1:322287/1‑100 (MQ=255) gTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCAt > 1:550007/1‑100 (MQ=255) ttACGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATa < 2:3884506/100‑1 (MQ=255) aCGACTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAgg < 1:2582479/100‑1 (MQ=255) aCTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGtt > 2:2834838/1‑100 (MQ=255) cTATATATTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTg < 2:1301436/100‑1 (MQ=255) tatataTTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTgg < 1:993220/100‑1 (MQ=255) tatatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAt > 1:66403/1‑100 (MQ=255) atatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtc < 1:2156775/100‑1 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtct > 1:1137896/1‑100 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtgt > 1:2696500/1‑98 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtct > 1:1444690/1‑100 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtct > 2:2594421/1‑100 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtct < 2:1923908/100‑1 (MQ=255) tatTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtct > 1:3718916/1‑100 (MQ=255) atTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtctc > 1:1062305/1‑100 (MQ=255) atTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtctc > 1:2392649/1‑100 (MQ=255) atTGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGAtctc < 1:2720665/100‑1 (MQ=255) gtGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTca < 2:690599/99‑1 (MQ=255) tGTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTcac < 1:910835/100‑1 (MQ=255) tGTCCTACCCGGGTACCACAAAAAAAAAAAAAAAAAAAAAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTcac < 2:1559491/100‑1 (MQ=255) gTCCTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTcaca > 2:1421448/1‑100 (MQ=255) ccTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACaaa < 2:717250/100‑1 (MQ=255) ccTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACaaa > 1:1288911/1‑100 (MQ=255) cTACCCGGGTACCACAATCACACCATTACCTACCCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAAc < 2:957823/100‑1 (MQ=255) cTACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAAc < 2:2789052/100‑1 (MQ=255) tACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACg > 1:2274406/1‑100 (MQ=255) tACCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACg > 1:36199/1‑100 (MQ=255) aCCCGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgc < 1:1591071/100‑1 (MQ=255) cccGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgca > 2:2009375/1‑100 (MQ=255) cccGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgca < 1:2904226/100‑1 (MQ=255) ccGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgcag > 1:1113164/1‑100 (MQ=255) ccGGGTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgcag < 1:3997922/100‑1 (MQ=255) gggTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACgcagca < 1:759361/100‑1 (MQ=255) gTACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAAc < 2:1488958/100‑1 (MQ=255) tACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACt < 2:838387/100‑1 (MQ=255) tACCACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACt < 1:1566625/100‑1 (MQ=255) ccACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCCTTCCCATAGGGTTGGATCTCCCAAACGCAGCAACtgg > 2:3082955/1‑100 (MQ=255) ccACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtgg > 2:2449205/1‑100 (MQ=255) ccACAATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtgg > 1:2458212/1‑100 (MQ=255) cacaATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggt > 2:3824160/1‑100 (MQ=255) cacaATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggt > 1:4069987/1‑100 (MQ=255) acaATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggtg > 1:3032021/1‑100 (MQ=255) acaATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggtg < 2:656656/100‑1 (MQ=255) caATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggtgg > 1:2900146/1‑100 (MQ=255) caATCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACtggtgg < 1:1979422/100‑1 (MQ=255) aTCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGaa > 2:303845/1‑100 (MQ=255) tCACACCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAAc < 1:229959/100‑1 (MQ=255) cacaCCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACa > 2:2524799/1‑100 (MQ=255) ccacCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAg < 1:868883/99‑1 (MQ=255) acacCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAg > 2:3681429/1‑100 (MQ=255) acacCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAg > 1:1267883/1‑100 (MQ=255) cacCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAgc > 2:3674537/1‑100 (MQ=255) acCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAgct > 1:278350/1‑100 (MQ=255) acCAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAgct < 2:2355907/100‑1 (MQ=255) ccAGTACCTAACCAGGAAGCGTTAGATGTTATCGTTTCACCACAGGCGTTCATTACCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAgcgg > 2:3984949/1‑98 (MQ=255) ccAGTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAgctg > 2:3860943/1‑100 (MQ=255) | GGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTG > NC_000913/3363070‑3363263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |