| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,461,243 | A→C | E74A (GAA→GCA) | gspG → | pseudopilin, cryptic, general secretion pathway |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,461,243 | 0 | A | C | 98.6% | 504.3 / ‑1.8 | 143 | E74A (GAA→GCA) | gspG | pseudopilin, cryptic, general secretion pathway |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base C (70/71); total (70/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
AAGCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATG > NC_000913/3461146‑3461338 | aaGCAAAAAGCCGTCCGCGATATTGTGGCGCTGGAACACGCCCTTGATATGTACAAATTCGACAATCATCACTATCCCACCACAAATCAGGGGCTTGCAt < 2:1179876/100‑1 (MQ=255) aacAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATc < 2:2648922/98‑1 (MQ=255) aGCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATc > 1:2779908/1‑100 (MQ=255) gCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGAATcc < 1:2475750/100‑1 (MQ=255) cAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCt < 2:958472/100‑1 (MQ=255) aaaaaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCtt > 1:3073781/1‑100 (MQ=255) aaaaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTta < 1:604502/100‑1 (MQ=255) aaaaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTta > 1:1843348/1‑100 (MQ=255) aaaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTtag < 2:3938063/100‑1 (MQ=255) aaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTtagt < 1:1817788/100‑1 (MQ=255) aaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTtagt < 2:3954252/100‑1 (MQ=255) aaGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAAATCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTtagt < 1:3883417/100‑1 (MQ=255) aGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACACATCAGGGGCTTGCATCCTtagta < 2:546841/100‑1 (MQ=255) gCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTtagtag > 1:3452920/1‑100 (MQ=255) cGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGaa > 1:1910412/1‑100 (MQ=255) gTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAg < 1:417660/100‑1 (MQ=255) gTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAg > 2:2879512/1‑100 (MQ=255) gTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAg < 1:2847922/100‑1 (MQ=255) gTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAg > 1:382384/1‑100 (MQ=255) gTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAg < 1:624639/100‑1 (MQ=255) aGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCGTAGTAGAAgcgc > 2:1969176/1‑100 (MQ=255) cGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCg > 1:1743320/1‑100 (MQ=255) atatTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGac < 1:312164/100‑1 (MQ=255) ttGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACt < 1:359756/100‑1 (MQ=255) tgtgGCGCTGGAAAACGCCCTTGATCTGTACACACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCGCTAGTAGAAGCGCCGACAATg > 2:3334312/1‑100 (MQ=255) tgtgGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTg < 2:3105207/100‑1 (MQ=255) tgGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGcc < 1:544061/100‑1 (MQ=255) tgGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGcc < 2:378052/100‑1 (MQ=255) ggCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCa < 1:4004429/100‑1 (MQ=255) gcgcTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCAc < 2:527038/100‑1 (MQ=255) cgcTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCAcc > 2:1717611/1‑100 (MQ=255) cgcTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCAcc > 1:2066267/1‑100 (MQ=255) ggAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTg < 1:604996/100‑1 (MQ=255) aaaaCGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGc > 1:244013/1‑100 (MQ=255) aaaaCGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGc < 1:3615104/100‑1 (MQ=255) aaaCGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGcc < 2:429879/100‑1 (MQ=255) aaCGCCCTTGATATGTACAAACTCGACAAGCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCg < 1:1007070/100‑1 (MQ=255) aaCGCCCTTGATATGCACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCg < 2:43183/100‑1 (MQ=255) aCGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCga > 2:1921227/1‑99 (MQ=255) aCGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGc > 1:2770055/1‑100 (MQ=255) gCCCTTGATATGTACAAACTCGACAATCATAACTATCCAACCACAAATCAGGGGCTTGCATCCCTAGTAGAGGCGCCGACACTGCCACCGCTGGCCGCaa > 2:3699470/1‑100 (MQ=255) cccTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCaca > 2:2924462/1‑98 (MQ=255) cTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACt < 1:1000741/100‑1 (MQ=255) cTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACt > 2:1190032/1‑100 (MQ=255) cTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACt < 1:726936/100‑1 (MQ=255) gATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACtata < 1:155593/100‑1 (MQ=255) gATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACtata < 1:1757245/100‑1 (MQ=255) gATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACtata < 2:2976194/100‑1 (MQ=255) tatGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAAc > 2:96131/1‑100 (MQ=255) tatGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAAc < 1:37276/100‑1 (MQ=255) tatGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAAc < 1:37419/100‑1 (MQ=255) gTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGTAAACTATAACaag > 1:3670722/1‑100 (MQ=255) gTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACaag < 2:2276710/100‑1 (MQ=255) gTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACaag > 2:674493/1‑100 (MQ=255) aaaCTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACaaggaag > 1:2215445/1‑100 (MQ=255) aCTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGt > 2:1341065/1‑100 (MQ=255) cTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGtt > 1:4051699/1‑100 (MQ=255) cTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGtt > 1:2242488/1‑100 (MQ=255) cGACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTtat > 2:2751935/1‑100 (MQ=255) gACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAGCAAGGAAGGTtata < 2:3365401/100‑1 (MQ=255) gACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTtata > 2:1757602/1‑100 (MQ=255) gACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTtata < 1:1349923/100‑1 (MQ=255) gACAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTtata > 2:321572/1‑100 (MQ=255) cAATCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATc < 1:3120715/100‑1 (MQ=255) aaTCATCACTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCa > 1:254347/1‑100 (MQ=255) tcatcaCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAg < 1:1082818/100‑1 (MQ=255) tcatcaCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAg < 1:2247227/100‑1 (MQ=255) tcatcaCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAg < 1:3902058/100‑1 (MQ=255) catcaCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGc > 1:2629598/1‑100 (MQ=255) atcaCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCg > 2:916223/1‑100 (MQ=255) caCTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTc > 1:3318153/1‑100 (MQ=255) cTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctg < 1:1392908/100‑1 (MQ=255) cTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctg > 2:2722469/1‑100 (MQ=255) cTATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctg < 1:1256292/100‑1 (MQ=255) tATCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctgc > 1:754094/1‑100 (MQ=255) ctCCAACCACAAGTCAGTGGCTTGCATCCTTAGTAGAAGCGCCGACACTGACACCGCTGGCCGCAAACTATAACATGGAAGGTTATATCAAGCGTctgcc < 2:204430/99‑1 (MQ=255) aTCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctgcc < 1:327414/100‑1 (MQ=255) aTCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctgcc > 2:1232292/1‑100 (MQ=255) tCCAACCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTctgcct > 2:2760140/1‑100 (MQ=255) cAACCGCAAATCAGGGGCTTGCATCATTAGTAGAAGCGCCGACACTGCCACCGCTCGCCGCAAACTATCACAAGGAAGGTCATATAAAGCGTctccctgc > 2:3519784/1‑100 (MQ=255) aaCCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCtgcctgcc > 1:428967/1‑100 (MQ=255) aCCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCg > 1:294831/1‑100 (MQ=255) aCCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCg > 1:2126704/1‑100 (MQ=255) aCCACAAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCg < 1:3023454/100‑1 (MQ=255) cacaAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGAt > 2:1768657/1‑100 (MQ=255) cacaAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGAt < 2:2241854/100‑1 (MQ=255) acaAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATc > 1:2582922/1‑100 (MQ=255) caAATCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATcc > 1:369088/1‑100 (MQ=255) aaaTCAGGGGCTTGAATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATccc < 1:92697/100‑1 (MQ=255) aaTCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCt < 2:2452009/100‑1 (MQ=255) aaTCAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCt > 2:3512417/1‑100 (MQ=255) cAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTggn < 1:611151/100‑2 (MQ=255) cAGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTggg < 1:1797770/100‑1 (MQ=255) aGGGGCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTgggg < 1:1745526/100‑1 (MQ=255) ggggCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGc > 2:400355/1‑100 (MQ=255) ggggCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGc < 2:1133839/100‑1 (MQ=255) ggggCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGc > 2:1080721/1‑100 (MQ=255) gCTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAAt < 2:290016/100‑1 (MQ=255) cTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATg < 2:2093838/100‑1 (MQ=255) cTTGCATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATg < 1:2980595/100‑1 (MQ=255) | AAGCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATG > NC_000913/3461146‑3461338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |