| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,468,138 | T→G | G572G (GGA→GGC) | chiA ← | periplasmic endochitinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,468,138 | 0 | T | G | 98.5% | 452.7 / ‑1.7 | 137 | G572G (GGA→GGC) | chiA | periplasmic endochitinase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (70/65); total (71/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.08e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
CAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGA > NC_000913/3468041‑3468234 | cAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGcc > 1:3089425/1‑100 (MQ=255)cAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGcc < 2:1366856/100‑1 (MQ=255) aGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCg < 1:1625636/100‑1 (MQ=255) aGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCg > 2:271676/1‑100 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg < 2:755421/100‑1 (MQ=255) gCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgg < 2:2923769/100‑1 (MQ=255) ccAGATCCGGGATCGTATTCAGCGTCAAGTCGACATACGGTGCATAAACGTGTTTCGACCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCgct > 2:2810510/1‑98 (MQ=255) ccAGATCCGGGATCGTATTCAGCGTAAAGTCGACATATGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACTTACGCGCTCTTTGGTGCCGGt < 2:3634216/100‑1 (MQ=255) cAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTc > 2:2738556/1‑100 (MQ=255) cAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTc < 2:1455339/100‑1 (MQ=255) cAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTc > 2:550025/1‑100 (MQ=255) aGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGTCGGTcc < 1:81515/100‑1 (MQ=255) aGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTcc > 2:3691725/1‑100 (MQ=255) aGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTcc > 2:1930822/1‑100 (MQ=255) aGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTcc < 1:1930608/100‑1 (MQ=255) aGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTATTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTcc < 2:3933237/100‑1 (MQ=255) gATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCa > 1:1051019/1‑100 (MQ=255) gATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCa < 1:2477587/100‑1 (MQ=255) ccGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTc < 1:3369098/100‑1 (MQ=255) ccGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTc < 1:2664227/100‑1 (MQ=255) ccGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTc > 2:316070/1‑100 (MQ=255) cGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTca > 1:2066984/1‑100 (MQ=255) gggATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaa > 1:1944146/1‑100 (MQ=255) gcaTCGTATTCAGCGTAAAGTCGACATACCGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTcaac < 2:2406670/98‑1 (MQ=255) tCGTATTCTGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACaaa < 2:1890578/100‑1 (MQ=255) gTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACaaaaa > 1:1342425/1‑100 (MQ=255) gTATTCAGCGTAAAGTCCACATACGGTGCATAAACGTGTTTCGGTCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACaaaaa < 1:3753173/100‑1 (MQ=255) tATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAac < 1:561352/100‑1 (MQ=255) aGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGcc < 1:2975486/100‑1 (MQ=255) cGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCAc > 1:3967007/1‑100 (MQ=255) aaaGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACggg < 1:1835950/100‑1 (MQ=255) aaGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGt < 1:1323348/100‑1 (MQ=255) aGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGtt < 1:2192878/100‑1 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg > 1:710483/1‑100 (MQ=255) gTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTg > 1:1568137/1‑100 (MQ=255) tCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGc < 1:3386521/100‑1 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCTCGCTTTCTTCGGCGTACCTTCGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg < 2:46240/100‑1 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg > 1:2857616/1‑100 (MQ=255) gACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTg < 1:2322396/100‑1 (MQ=255) aCATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGt > 1:5627/1‑100 (MQ=255) cATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTc < 1:1099348/100‑1 (MQ=255) cATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTc < 1:1437080/100‑1 (MQ=255) aTACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTCGTGCCGGTCCAGTCCACAACCACACGCCACGGGTTGCTGTCa > 2:3266052/1‑100 (MQ=255) tACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAg < 2:2294366/100‑1 (MQ=255) tACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAg > 1:4002050/1‑100 (MQ=255) aCGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGa < 1:1760670/100‑1 (MQ=255) ggTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAg > 1:888380/1‑100 (MQ=255) ggTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAg > 2:1685657/1‑100 (MQ=255) gTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAgg > 1:2625666/1‑100 (MQ=255) gCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGgag > 1:766092/1‑100 (MQ=255) gCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGgag > 1:2449758/1‑100 (MQ=255) cATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGgaga > 1:2810908/1‑100 (MQ=255) aaaCGGGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAAc > 2:594977/1‑100 (MQ=255) cGTGTTTCGGCCACGCTTTCTTCGGCGAAAATACGCCCTCTTTGGTGCCGGTACAGTCAATAAAAAAACGCCCCGGGTTCAAGTCAGCAGGAGAACCttt > 2:2401716/1‑100 (MQ=255) gtgtTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTc < 2:2027579/100‑1 (MQ=255) tttCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGc < 2:1541470/100‑1 (MQ=255) cGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACt > 2:1608724/1‑100 (MQ=255) ggCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACtt > 2:1701455/1‑100 (MQ=255) ggCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACtt > 1:1759065/1‑100 (MQ=255) gCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACttt > 2:3055452/1‑100 (MQ=255) gCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACttt > 1:2510981/1‑100 (MQ=255) ccACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTa > 1:2608615/1‑100 (MQ=255) ccACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTa > 1:340927/1‑100 (MQ=255) cACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTAc > 1:1602789/1‑100 (MQ=255) cACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTAc < 2:1105363/100‑1 (MQ=255) cGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTActc > 1:2686722/1‑100 (MQ=255) gCTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTActct > 2:454825/1‑100 (MQ=255) cTTTCTTCGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTg > 2:1493801/1‑100 (MQ=255) ttcttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTgag > 2:571473/1‑100 (MQ=255) ttcttcGGCGTACCTACGCGCTCTTTGGTGCCGGGCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTgag < 2:68823/100‑1 (MQ=255) tcttcGGCGGACCTGCGCGGTCTTTGTTGCCGGAGCAATCAATAAAATCGCGCTACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTgaga < 2:1350546/100‑1 (MQ=255) cttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGaa > 2:2165321/1‑100 (MQ=255) ttcGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGaaa < 1:2899728/100‑1 (MQ=255) cGGCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATg < 1:1605868/100‑1 (MQ=255) ggCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGt > 2:3162411/1‑100 (MQ=255) ggCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGt > 1:57485/1‑100 (MQ=255) ggCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGt > 1:3604358/1‑100 (MQ=255) gCGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGGTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTa > 1:3501210/1‑100 (MQ=255) cGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAg < 1:1730353/100‑1 (MQ=255) cGTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAg < 1:2638229/100‑1 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt < 1:1120039/100‑1 (MQ=255) gTACCTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGt < 1:1014689/100‑1 (MQ=255) cTACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTcac < 2:1048556/100‑1 (MQ=255) tACGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTcaca > 2:3709054/1‑100 (MQ=255) aCGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCacac > 2:2482647/1‑100 (MQ=255) aCGCGCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCacac > 1:1131260/1‑100 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACAcc < 1:276237/100‑1 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACAcc > 1:2426391/1‑100 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACAcc > 1:1080451/1‑100 (MQ=255) cgcgCTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACAcc > 1:375925/1‑100 (MQ=255) gcgcTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCg > 2:3480800/1‑100 (MQ=255) cgcTCTTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGt < 2:3491073/100‑1 (MQ=255) tctTTGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTaa < 1:1567864/100‑1 (MQ=255) ctTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTaaa > 1:3883047/1‑100 (MQ=255) tttGGTGCCAGACGAGTAAACACAAACATGCCAGGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTCCTCTGAGAAATGTAGTTCACACCGTTAAAg < 2:108373/100‑1 (MQ=255) ttGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGc > 1:665860/1‑100 (MQ=255) tGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCg > 1:2372865/1‑100 (MQ=255) tGGTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCg < 1:3764541/100‑1 (MQ=255) ggTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGa > 1:1900990/1‑100 (MQ=255) ggTGCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGa > 1:3193447/1‑100 (MQ=255) | CAGCCAGATCCGGGATCGTATTCAGCGTAAAGTCGACATACGGTGCATAAACGTGTTTCGGCCACGCTTTCTTCGGCGTACCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGA > NC_000913/3468041‑3468234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |