BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,752,058	A→C	I23L (ATC→CTC)	yiaU →	putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,752,058	0	A	C	100.0%	557.3 / NA	163	I23L (ATC→CTC)	yiaU	putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (70/93); total (70/93)

Only 100 of 164 total aligned reads displayed.

ATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACC  >  NC_000913/3751961‑3752154

 tataAAATTATATATAATTGGGCTGTTGCGATGAAAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCa                                                                                                <  2:2260766/100‑1 (MQ=255)

  ataAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAg                                                                                               >  1:3881244/1‑100 (MQ=255)

  ataAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAAATTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAg                                                                                               <  2:320350/100‑1 (MQ=255)

   taAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGc                                                                                              <  1:4010204/100‑1 (MQ=255)

    aaaaTTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGcc                                                                                             <  1:3175593/100‑1 (MQ=255)

     aaaTTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCa                                                                                            >  2:3417827/1‑100 (MQ=255)

      aaTTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCAt                                                                                           <  2:89097/100‑1 (MQ=255)

       aTTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATg                                                                                          >  1:973427/1‑100 (MQ=255)

         tatatataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGcc                                                                                        <  1:1254147/100‑1 (MQ=255)

          atatataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCcg                                                                                       <  1:3378735/100‑1 (MQ=255)

           tatataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCCCAGCCATGCcgc                                                                                      >  2:3253007/1‑100 (MQ=255)

            atttaATTGGGCTGTTGCGATGAAAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCcgcg                                                                                     <  2:10781/97‑1 (MQ=255)

            atataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCcgcg                                                                                     >  1:3605943/1‑100 (MQ=255)

            atataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCcgcg                                                                                     >  2:1839249/1‑100 (MQ=255)

             tataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGa                                                                                    >  1:3579341/1‑100 (MQ=255)

             tataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGa                                                                                    >  2:2672984/1‑100 (MQ=255)

              ataATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGAc                                                                                   <  2:1599103/100‑1 (MQ=255)

               taATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATTCTGCGACt                                                                                  >  2:2241003/1‑100 (MQ=255)

               taATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACt                                                                                  >  2:3109388/1‑100 (MQ=255)

                aaTTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTg                                                                                 <  1:2999346/100‑1 (MQ=255)

                 aTTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGt                                                                                <  1:2595756/100‑1 (MQ=255)

                     ggCGGTTTCGATGACAAAATTACAACTTAAGTACCGTGAGTTAAAAATTAGCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACtt                                                                            <  1:2570384/100‑1 (MQ=255)

                      gCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTg                                                                           <  1:4086145/100‑1 (MQ=255)

                      gCTGTGGAGACGACGAAATTACAACCTAAGTACCGGGAGTTAAAAATTATCTCAAGAATCGCTGCCAGATAAAAACTCAGCCAGGCCGCGACTGTACTTg                                                                           <  2:661014/100‑1 (MQ=255)

                       cTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTgg                                                                          >  2:3812040/1‑100 (MQ=255)

                        tGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTTAAAATTATCTCGGTAATCGCTGCCCGTGAAAATCCCAGCCATGCAGCGACGGTACTTgcc                                                                         >  2:143243/1‑98 (MQ=255)

                           tGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATc                                                                      <  1:2565719/100‑1 (MQ=255)

                           tGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATc                                                                      <  2:442171/100‑1 (MQ=255)

                            gCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCg                                                                     >  1:3386705/1‑100 (MQ=255)

                            ctgATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCg                                                                     <  1:1097429/98‑1 (MQ=255)

                               aTGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGcac                                                                  <  2:3230743/100‑1 (MQ=255)

                               aTGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGcac                                                                  <  1:4025409/100‑1 (MQ=255)

                                tGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAAGCGCGGCCAGGGAAAATCGCAGCCATTCGGCGACTTTATTTGGCATCGcaga                                                                 >  2:183780/1‑98 (MQ=255)

                                 gACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGcacan                                                                <  1:3237003/100‑2 (MQ=255)

                                 gACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAg                                                                <  1:2744641/100‑1 (MQ=255)

                                  aCAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAgg                                                               <  2:2014182/100‑1 (MQ=255)

                                       aTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAAc                                                          >  2:2972393/1‑100 (MQ=255)

                                       aTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAAc                                                          >  2:2799447/1‑100 (MQ=255)

                                        ttACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACg                                                         <  1:3701265/100‑1 (MQ=255)

                                        ttACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACg                                                         <  2:2118179/100‑1 (MQ=255)

                                        ttACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCACGCCGCGACTGTACTTGGCATCGCACAGGCCAACg                                                         <  2:2119421/100‑1 (MQ=255)

                                            aaCTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAg                                                     >  1:3471405/1‑100 (MQ=255)

                                              cTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCa                                                   >  2:3655623/1‑100 (MQ=255)

                                                tAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCaa‑a                                                >  1:412282/1‑100 (MQ=255)

                                                tAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCaa‑a                                                >  1:207469/1‑100 (MQ=255)

                                                  aGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ata                                              >  1:2136366/1‑100 (MQ=255)

                                                    tACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATc                                            >  1:2320907/1‑100 (MQ=255)

                                                     aCCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAG‑AGATCt                                           >  1:2230180/1‑100 (MQ=255)

                                                      ccGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCtt                                          >  2:2887907/1‑100 (MQ=255)

                                                      ccGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCtt                                          <  2:288368/100‑1 (MQ=255)

                                                      ccGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCtt                                          >  2:2416348/1‑100 (MQ=255)

                                                        gggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGc                                        <  1:1763401/100‑1 (MQ=255)

                                                        gggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGc                                        <  2:1113900/100‑1 (MQ=255)

                                                        gggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGc                                        <  2:440800/100‑1 (MQ=255)

                                                        gggAGTTAAAAATTAGCTCGGTAATCGCTGTCAGTGAAAAGCTCAGCCATGCCGCGACTGTACTTGGCATCGAACAGGCCAACGTCAGCAA‑ATATCTTGc                                        >  1:3543214/1‑100 (MQ=255)

                                                         ggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCt                                       >  1:1853637/1‑100 (MQ=255)

                                                            gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAt                                    >  2:2854886/1‑100 (MQ=255)

                                                            gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAt                                    >  2:1331587/1‑100 (MQ=255)

                                                            gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCAAACGTCAGCAAGATAT‑TTGCTGac                                    <  2:2776157/100‑2 (MQ=255)

                                                             ttAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacg                                   <  1:2695569/100‑3 (MQ=255)

                                                             ttAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacg                                   <  2:1012453/100‑3 (MQ=255)

                                                              tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAttt                                  >  1:430692/1‑100 (MQ=255)

                                                              tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAttt                                  >  1:2919562/1‑100 (MQ=255)

                                                              tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAttt                                  <  1:3669265/100‑1 (MQ=255)

                                                               aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgtt                                 <  2:838023/100‑5 (MQ=255)

                                                               aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgtt                                 <  2:1273767/100‑5 (MQ=255)

                                                               aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTTCTtttttt                                 >  2:1947482/1‑100 (MQ=255)

                                                               aaaaaTTATCGCGGTAATCGCTGCCAGTGAAAATCTCAGCCATACCGCGACTTTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAtttt                                 <  2:2445481/100‑1 (MQ=255)

                                                                aaaaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTg                                <  2:2748243/100‑1 (MQ=255)

                                                                 aaaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGa                               >  1:895492/1‑100 (MQ=255)

                                                                  aaTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGaa                              <  1:219631/100‑1 (MQ=255)

                                                                  aaTTATCACGGTAATCGCTGCCAGTGAAAATCTCAGCAATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGaa                              <  2:3506490/100‑1 (MQ=255)

                                                                   aTTATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAAt                             <  1:2448592/100‑1 (MQ=255)

                                                                    ttATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATc                            <  1:3065835/100‑1 (MQ=255)

                                                                     tATCTCGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCa                           >  1:1646186/1‑100 (MQ=255)

                                                                         tcGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAg                       >  1:124818/1‑100 (MQ=255)

                                                                         tcGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAg                       >  2:3371645/1‑100 (MQ=255)

                                                                          cGGTAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGt                      >  2:1648679/1‑100 (MQ=255)

                                                                             tAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTggg                   >  2:3085723/1‑100 (MQ=255)

                                                                             tAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTggg                   <  2:1537004/100‑1 (MQ=255)

                                                                             tAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTggg                   <  2:2373406/100‑1 (MQ=255)

                                                                             tAATCGCTGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTggg                   <  2:2264495/100‑1 (MQ=255)

                                                                             tAATCGCTGCCAGTGAAAATCTCAGCCATGCAGTGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTggg                   <  2:2736651/100‑1 (MQ=255)

                                                                                    tGCCAGTGAAAATCTCAGCCATGCCGGGACTGTACTTGGCATCGAACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaaaa            <  2:2046943/100‑1 (MQ=255)

                                                                                    tGCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaaaa            <  1:2144967/100‑1 (MQ=255)

                                                                                     gCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAg           <  1:2471901/100‑1 (MQ=255)

                                                                                     gCCAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAg           <  1:888350/100‑1 (MQ=255)

                                                                                       cAGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTc         <  1:929964/100‑1 (MQ=255)

                                                                                        aGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCt        >  2:1044569/1‑100 (MQ=255)

                                                                                        aGTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCt        >  2:515484/1‑100 (MQ=255)

                                                                                         gTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt       >  1:1930453/1‑100 (MQ=255)

                                                                                         gTGAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt       >  1:686022/1‑100 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg     <  1:764533/100‑1 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg     <  2:740444/100‑1 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg     <  1:2322631/100‑1 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg     <  2:3687527/100‑1 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg     <  1:1020165/100‑1 (MQ=255)

                                                                                           gAAAATCTCAGCCATGCCGCGACTGCACTTGACATCGCACAGGCCAACGTCAGCAA‑ATATCTTACTGATTTTGAACCAAAAGAGGGTTTAAAAGTCTTTg     >  2:684376/1‑100 (MQ=255)

                                                                                              aaTCTCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc  <  1:522090/100‑1 (MQ=255)

                                                                                              aaTCTCAGCCATGCCGCGACTGTACTTGGCATCGAACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc  <  2:862092/100‑1 (MQ=255)

ATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACC  >  NC_000913/3751961‑3752154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`