| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,464,914 | T→G | I423L (ATC→CTC) | treB ← | trehalose‑specific PTS enzyme: IIB and IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,464,914 | 0 | T | G | 93.9% | 502.9 / 11.6 | 163 | I423L (ATC→CTC) | treB | trehalose‑specific PTS enzyme: IIB and IIC component |
| Reads supporting (aligned to +/- strand): ref base T (5/5); new base G (72/81); total (77/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
GTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGTTGAT > NC_000913/4464815‑4465010 | gTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAt < 1:1415088/100‑1 (MQ=255) aCAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGc < 1:1756884/100‑1 (MQ=255) cAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGcc > 1:2867492/1‑100 (MQ=255) aTCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCAt > 2:1443934/1‑100 (MQ=255) aTCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCAt > 2:1763393/1‑100 (MQ=255) cGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTc > 1:3489482/1‑100 (MQ=255) gggATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCg < 2:1785761/100‑1 (MQ=255) ggATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGc < 1:3524954/100‑1 (MQ=255) tgatggtgGCGGTAGCCACTGCCAGCGCAAACAGCTGCCAGTAGCTCGGTTGTATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCGAt < 2:3997489/100‑1 (MQ=255) gatgatgTCGATAGCCACTGCCAGCGCAAACAGCTGCCAGTAGCGCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATa < 1:3744092/100‑1 (MQ=255) atgatgGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATaa > 2:176414/1‑100 (MQ=255) tgatgGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAAc < 2:1877024/100‑1 (MQ=255) gatgGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACg > 2:213321/1‑100 (MQ=255) gatgGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACg > 2:2808608/1‑100 (MQ=255) tgGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGcc > 2:3272703/1‑100 (MQ=255) ggCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCg > 1:2082348/1‑100 (MQ=255) ggCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCg < 2:3971014/100‑1 (MQ=255) gggATAGCCGTTGCCTGCGCAATCACCTTCCCGTCGCTCGGTGGGATCGAGAGGATTCCCGGCAGGCCGCCTCGGCCGAGGCCGCTCGCCGTAACTCCGt < 2:2943785/98‑1 (MQ=255) gCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGc < 1:3306136/100‑1 (MQ=255) gCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGc > 1:843267/1‑100 (MQ=255) gCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGc > 2:352516/1‑100 (MQ=255) gCCAATGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCACCATAACGCCGTTCAGGc > 2:3386789/1‑100 (MQ=255) aTTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGc > 2:215944/1‑100 (MQ=255) aTTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGc < 1:898971/100‑1 (MQ=255) ttGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCa < 2:268926/100‑1 (MQ=255) tGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGACTCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATCACGCCGTTCAGGCCGCAt > 2:3696318/1‑100 (MQ=255) ccAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAg > 1:3161557/1‑100 (MQ=255) ccAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAg < 1:3407230/100‑1 (MQ=255) cAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGc < 1:4032270/100‑1 (MQ=255) cAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGc < 1:323414/100‑1 (MQ=255) cAGCGCAAACACCCGCCAGTAGATCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGc < 1:393445/100‑1 (MQ=255) cgcAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAAt < 1:1397227/100‑1 (MQ=255) gcAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATc < 1:3092734/100‑1 (MQ=255) gcAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATc < 2:748642/100‑1 (MQ=255) cAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATcc > 2:2525377/1‑100 (MQ=255) cAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATcc > 1:135472/1‑100 (MQ=255) aatacatCTGCCAGTAGCTCGGTTGAAACAAGATAATTCCCGGCAATCCTGCTACGCCGATGCCATTCGGCATATCGTCGTGTAGGCTGCCTATCAATca > 2:3474265/4‑99 (MQ=255) aaCACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTGCGCCGCGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTg < 2:3259029/100‑1 (MQ=255) aaCACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTg < 2:2187879/100‑1 (MQ=255) acacCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 1:68143/100‑1 (MQ=255) acacCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc > 2:1254359/1‑100 (MQ=255) cacCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGcc < 1:3656036/100‑1 (MQ=255) cacCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGcc < 2:895360/100‑1 (MQ=255) acCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGcca < 2:1631141/100‑1 (MQ=255) ccTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccag < 1:3861348/100‑1 (MQ=255) ccTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccag > 1:2797344/1‑100 (MQ=255) tGCCAGTAGCTCGGTTGCATCGAGCGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagac < 2:2141085/100‑1 (MQ=255) gCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagacc < 1:3456450/100‑1 (MQ=255) ccAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagacca < 1:1506873/100‑1 (MQ=255) aGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagaccaga > 1:371804/1‑100 (MQ=255) aGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagaccaga > 1:659716/1‑100 (MQ=255) aGTAGCTCGGTTGAATCGAGAGAATCCCCGGCAGGCCTCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagaccaga < 1:3800168/100‑1 (MQ=255) tAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAc < 1:3682345/100‑1 (MQ=255) tAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAc < 2:2430568/100‑1 (MQ=255) tAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAc < 1:253195/100‑1 (MQ=255) tAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAc < 1:161888/100‑1 (MQ=255) tAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAc < 1:1514899/100‑1 (MQ=255) aGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAAcc < 2:785397/100‑1 (MQ=255) gCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCCTAGCAACCCTGCCAGACCAGAACCa > 2:1277628/1‑100 (MQ=255) gCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCa < 1:1927618/100‑1 (MQ=255) cGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAatc > 2:1059856/1‑100 (MQ=255) gggtGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAatca < 1:963025/97‑1 (MQ=255) gTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAatcat > 1:2372421/1‑100 (MQ=255) ttGAATCGAGAGCATTCCCGGCAGGCCGCCGACGCCGAGGCCATTCGCTATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAatcatc < 1:3887001/100‑1 (MQ=255) tGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCACATAGCAATCCTGCCAGACCAGAACCAATCATcg < 1:763146/100‑1 (MQ=255) aaTCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATcgcg > 2:3579395/1‑100 (MQ=255) aTCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCgcgc > 1:3958276/1‑100 (MQ=255) tCGAGAGAATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:3947143/100‑1 (MQ=255) gagagaATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGcaca > 2:3775500/1‑100 (MQ=255) agagaATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAg < 1:2547409/100‑1 (MQ=255) gagaATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGc < 2:3840960/100‑1 (MQ=255) gaATTCCCGGCAGGCCGCCTACGCCGAGGCCATTCACCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCAt > 2:157571/1‑100 (MQ=255) atccccGGCAGGCCGCCTACCCCGAGGCCAGTCACCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCg < 2:1640064/97‑1 (MQ=255) ttCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCgg < 1:1248973/100‑1 (MQ=255) ttCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCgg > 1:2322467/1‑100 (MQ=255) ttCCCGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCgg < 2:1988436/100‑1 (MQ=255) cccGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGa > 2:1044136/1‑100 (MQ=255) cccGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGa > 1:2605857/1‑100 (MQ=255) cccGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGa > 2:2320795/1‑100 (MQ=255) cccGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGa < 1:1995409/100‑1 (MQ=255) cGGCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAg > 2:544068/1‑100 (MQ=255) ggCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGc < 2:3771662/100‑1 (MQ=255) ggCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGc < 1:3126719/100‑1 (MQ=255) ggCAGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGc < 2:3368293/100‑1 (MQ=255) ggCAGGCCGCCGACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCGGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGc < 2:1819695/100‑1 (MQ=255) aGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGat > 2:2354977/1‑100 (MQ=255) aGGCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGat < 1:1231564/100‑1 (MQ=255) aGGCCGCCTACACCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGat > 1:1594870/1‑100 (MQ=255) ggCCGCCTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGata > 1:3337707/1‑100 (MQ=255) ccgccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATAtt < 2:3559494/100‑1 (MQ=255) ccgccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATAtt > 1:2637937/1‑100 (MQ=255) ccgccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATAtt > 2:2864171/1‑100 (MQ=255) ccgccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATAtt < 2:2597708/100‑1 (MQ=255) ccgccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATAtt > 1:225784/1‑100 (MQ=255) ccTACGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCa < 1:2038221/100‑1 (MQ=255) aCGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGt < 2:2497443/100‑1 (MQ=255) aCGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGt < 2:2339888/100‑1 (MQ=255) cGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGtt < 1:2270829/100‑1 (MQ=255) cGCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGtt > 2:2207499/1‑100 (MQ=255) gCCGAGGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGTTg < 2:2508046/100‑1 (MQ=255) | GTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAACACCTGCCAGTAGCTCGGTTGAATCGAGAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATTCGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATATTTCAGGTTGAT > NC_000913/4464815‑4465010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |