| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 428,252 | T→G | I202M (ATT→ATG) | secD → | SecYEG protein translocase auxillary subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 428,252 | 0 | T | G | 96.7% | 504.7 / 2.9 | 153 | I202M (ATT→ATG) | secD | SecYEG protein translocase auxillary subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/4); new base G (74/74); total (75/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
AAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCT > NC_000913/428155‑428347 | aaaaCAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATcagcag > 1:3859041/1‑100 (MQ=255) aaaCAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCAATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGCTGagcagc > 2:2704672/1‑100 (MQ=255) caacTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAg > 1:3737584/1‑100 (MQ=255) aacTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAgg < 1:1982425/100‑1 (MQ=255) cTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGgc < 2:3514119/100‑1 (MQ=255) aCGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGgcag < 1:1436674/100‑1 (MQ=255) cGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGgcagc < 1:988713/100‑1 (MQ=255) gCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCaa < 1:3407132/100‑1 (MQ=255) gCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCaa < 1:1230303/100‑1 (MQ=255) gCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCaa > 1:3725815/1‑100 (MQ=255) ccTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAAc > 2:2272896/1‑100 (MQ=255) ccTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAAc > 1:2184727/1‑100 (MQ=255) ccTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAAc > 2:958510/1‑100 (MQ=255) cTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAAcc > 1:3667763/1‑100 (MQ=255) tGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCa > 2:956497/1‑100 (MQ=255) tGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCa < 1:940380/100‑1 (MQ=255) aGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGc < 2:857889/100‑1 (MQ=255) aGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGc > 1:3602555/1‑100 (MQ=255) aGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGc < 2:4001378/100‑1 (MQ=255) gCATCACTTTCCGCGATGGTAAAGCTCGTGATGAAGCCATTGCGGATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCt < 2:2514549/100‑1 (MQ=255) tCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcg < 1:2669021/100‑1 (MQ=255) tCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcg < 2:2429594/100‑1 (MQ=255) tCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcg > 1:438835/1‑100 (MQ=255) cTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCtgcgtgc > 2:316794/1‑100 (MQ=255) cTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCCGCCAGGGCAGCAACCAGCtgcgtgc > 2:2212273/1‑100 (MQ=255) cTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcgtgc < 1:1241878/100‑1 (MQ=255) cTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCCGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcgtgc > 2:2833389/1‑100 (MQ=255) tttCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCtgcgtgcg > 1:240122/1‑100 (MQ=255) ttCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCgg < 2:2054814/100‑1 (MQ=255) ccGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTa > 1:1445736/1‑100 (MQ=255) cgcgATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTaa > 2:3695986/1‑100 (MQ=255) cgcgATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTaa > 1:1042923/1‑100 (MQ=255) cgcgATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTaa > 1:2531737/1‑100 (MQ=255) gcgATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAAt < 2:3491596/100‑1 (MQ=255) agctGCTAAAGCTCGTAAAGAAGAAATAGCGTATCTGAGCAAGACCCAACCGGACCTGGAAATGCGCCGCCCGCGCAGCCAAAAGCTGCGTGCGGTaaag < 2:1387276/97‑3 (MQ=255) gATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGa > 1:749881/1‑100 (MQ=255) tGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCGGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGc < 2:520723/100‑1 (MQ=255) tGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGc > 2:1771584/1‑100 (MQ=255) gCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCg > 1:332749/1‑100 (MQ=255) aaaGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGAACCCCGTGCAGCAACCAGCCGCGTGCGGTAATGAGCGATg > 2:1604086/1‑100 (MQ=255) aaaGCTCGTGATGAAGCCATTGAGTATCTGAGCAAGCACCATCCGGAACTTGTGATGAGCAGCCAGGGGAACCACCAGCTACATGCGGTAATGAGCGATg > 2:1603925/1‑100 (MQ=255) gCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTc > 2:2012849/1‑100 (MQ=255) cTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCg > 1:3349039/1‑100 (MQ=255) cTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCg > 1:863939/1‑100 (MQ=255) tCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCgc > 1:3618050/1‑99 (MQ=255) cGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTc > 2:2292244/1‑100 (MQ=255) cGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTc < 2:2689671/100‑1 (MQ=255) cGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTc > 2:283821/1‑100 (MQ=255) gTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCt < 1:2712647/100‑1 (MQ=255) gTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCt > 2:3398696/1‑100 (MQ=255) gatgaAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGa > 2:61882/1‑100 (MQ=255) atgaAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAg < 2:2420795/100‑1 (MQ=255) atgaAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAg > 2:2384893/1‑100 (MQ=255) gaAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTg < 1:2858798/100‑1 (MQ=255) gaAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTg < 1:3506176/100‑1 (MQ=255) aGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGaa > 1:1711413/1‑100 (MQ=255) gCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCACCAACCAGCTGCGTGTGGTAATGAGCGTTGCTCGTCTGCGTGAAg < 2:629204/100‑1 (MQ=255) ccATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAgc > 2:2942689/1‑100 (MQ=255) cATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAgcg > 2:144570/1‑100 (MQ=255) gCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTg < 2:1420415/100‑1 (MQ=255) cGTATCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGa > 2:2658417/1‑100 (MQ=255) tATCTGAGCAAGCGCCATCCGGACCTGGTGATGCGCCGCCAGGGCAGCAACCTGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAat < 1:824069/100‑1 (MQ=255) aTCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAata < 1:3157080/100‑1 (MQ=255) aTCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAata > 1:549596/1‑100 (MQ=255) aTCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAata > 1:3266285/1‑100 (MQ=255) aTCTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCCCGTCTGAGTGAAGCGCGTGAata > 2:1014338/1‑100 (MQ=255) cTGAGCAAGCGCCATCCGGACCTGGTGGTTAGCAGGCAGAGCCGCAACTAGATGCTTAGAGTAATGAGCGATGCTGGTCTGAGCGCAGCGCGTGAATATg < 2:821786/100‑1 (MQ=255) cTGAGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATCTg > 2:2139179/1‑100 (MQ=255) cTGAGCAAGCGCCATCCGGACCTGGCGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATg > 2:3066277/1‑100 (MQ=255) tGAGCAAGCGGCATGCGGTCCTGGTGATGAACAGCCAGCGCAGCAACCAGCGGCGTCCGGTAATGAGCGATGCTCGTCTGCGTGGAGCGCGCCAATATGc < 2:978977/100‑1 (MQ=255) aGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCgg > 1:1075287/1‑100 (MQ=255) aGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCgg < 1:1626447/100‑1 (MQ=255) aGCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCgg < 2:1795371/100‑1 (MQ=255) gCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGt < 1:1982576/100‑1 (MQ=255) gCAAGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGGGAATATGCGGt > 2:2719988/1‑100 (MQ=255) aaGCGCCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgc < 1:1588600/100‑1 (MQ=255) gcgcCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgcag < 1:1704768/100‑1 (MQ=255) gcgcCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgcag < 1:1916836/100‑1 (MQ=255) gcgcCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgcag < 1:1916858/100‑1 (MQ=255) cgcCATCCGGACCTGTTGATGAGCAGCCAGGTCATCAACCAGCTGCGTGCGGTAATAAGCGATGCTCGTCTGAGTAAAGCTCGGTAATATTCGGTgcagc < 2:808536/100‑1 (MQ=255) gcCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgcagca < 2:3214981/100‑1 (MQ=255) gcCATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTgcagca < 1:2876689/100‑1 (MQ=255) ccATCCGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGcagcag > 2:1659332/1‑100 (MQ=255) ctCCGGACCTGGGGATGAGCAGCCGGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGAGGCGCGGCTGAGTGAAGCGGGTTTATATGCGGTGCCGCAGaa > 2:3865840/2‑100 (MQ=255) aTCCGGACCTGGTGATGAGCAGCCAGGGCAGCAAACAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGaa < 1:3489779/100‑1 (MQ=255) cGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACAt > 1:453233/1‑100 (MQ=255) cGGACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACAt < 2:1059912/100‑1 (MQ=255) ggACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACAtt < 2:1330109/100‑1 (MQ=255) gACCTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTa < 1:638552/100‑1 (MQ=255) ccTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGGAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAat > 1:3875617/1‑100 (MQ=255) cTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAata > 2:2504915/1‑100 (MQ=255) cTGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCACGTCTGAGTGAAGCGCGAGAATATGCGGTGCAGCAGAACATTAata > 2:1617561/1‑100 (MQ=255) tGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAatat < 1:2761869/100‑1 (MQ=255) tGGTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAatat < 1:2628625/100‑1 (MQ=255) gTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATcc > 2:680390/1‑100 (MQ=255) gTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATcc > 2:854361/1‑100 (MQ=255) gTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGAGAATATGCGGTGCAGCAGAACATTAATATcc < 2:1363502/100‑1 (MQ=255) gTGATGAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCGCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATcc > 2:1814752/1‑100 (MQ=255) tgatgaGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCt > 1:1498226/1‑100 (MQ=255) tgatgaGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCt > 2:2495936/1‑100 (MQ=255) | AAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCT > NC_000913/428155‑428347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |