| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 576,137 | T→G | pseudogene (689/1040 nt) | nmpC ← | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 576,137 | 0 | T | G | 97.1% | 457.6 / 3.0 | 137 | pseudogene (689/1040 nt) | nmpC | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base G (62/70); total (63/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.70e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGC > NC_000913/576041‑576231 | tGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTGTGCCGGAAGCAAATACTGCAg < 1:3480118/100‑1 (MQ=255) gggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAgg > 2:1831288/1‑100 (MQ=255) ggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGga < 1:713197/100‑1 (MQ=255) ggTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGga < 2:1238178/100‑1 (MQ=255) tttCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGgaag < 2:3365637/100‑1 (MQ=255) tttCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGgaag < 1:1942988/100‑1 (MQ=255) gAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACtt > 1:1054778/1‑100 (MQ=255) gAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACtt > 2:572599/1‑100 (MQ=255) gAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACtt > 1:1956316/1‑100 (MQ=255) aGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTccc < 1:551093/100‑1 (MQ=255) ggTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCt > 1:1110218/1‑100 (MQ=255) ggTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCt > 2:207746/1‑100 (MQ=255) gTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTg > 1:126710/1‑100 (MQ=255) gTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTg > 1:1802499/1‑100 (MQ=255) aGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCa < 1:366512/100‑1 (MQ=255) gTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCAt < 1:2380450/100‑1 (MQ=255) ggCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTa < 1:2295053/100‑1 (MQ=255) ccAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACTGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAAc > 2:3191956/1‑100 (MQ=255) ccAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAAc < 2:1043205/100‑1 (MQ=255) cAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACt < 1:1355346/100‑1 (MQ=255) cAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACt < 1:1399306/100‑1 (MQ=255) cAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGACCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACt < 2:1181352/100‑1 (MQ=255) ggTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTg > 1:3612424/1‑100 (MQ=255) tAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAg < 2:2892499/100‑1 (MQ=255) tAAATGTTGTTAGCGTCATATTGCAGACCCGGGGCCCAAACCTCTGAGTTTTTACCGGAACCAAATACTGCAGGAAGAACAGTCCCTGCATTAACTTGAg < 2:1619391/100‑1 (MQ=255) aaaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCGTTAACTTGAgt > 2:3189764/1‑100 (MQ=255) aaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCTTTAACTTGAgtg < 1:3514123/100‑1 (MQ=255) aaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCTTTAACTTGAgtg < 1:3514775/100‑1 (MQ=255) aaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAgtg < 2:1176639/100‑1 (MQ=255) aaTGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAgtg > 1:515760/1‑100 (MQ=255) tgttgtTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGACGAACTTTCCCTGCATTAACTTGAGTGTc > 2:3030086/1‑100 (MQ=255) gttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCg < 1:797147/100‑1 (MQ=255) ttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCgg < 2:3797616/100‑1 (MQ=255) ttgttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCgg < 1:2600974/100‑1 (MQ=255) gttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTa > 1:2572868/1‑100 (MQ=255) ttAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTAc < 2:3185622/100‑1 (MQ=255) tAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACg > 1:3172174/1‑100 (MQ=255) tAGCGTCATATTGCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACg < 2:3473497/100‑1 (MQ=255) gCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGAt < 1:1405275/100‑1 (MQ=255) gCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGAt < 2:3548388/100‑1 (MQ=255) gTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCa > 1:1403360/1‑100 (MQ=255) cATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGa > 2:823835/1‑100 (MQ=255) cATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGa > 1:3996779/1‑100 (MQ=255) cATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGGCGGTACGCTCAGa > 1:3671812/1‑100 (MQ=255) atatTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAt < 2:1349560/100‑1 (MQ=255) atatTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAt < 1:2171928/100‑1 (MQ=255) atatTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAt < 2:2371227/100‑1 (MQ=255) atatTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAt < 2:1329812/100‑1 (MQ=255) atatTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTAAGATCAGAt < 2:3837009/100‑1 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGGTCAGAttt > 1:3890499/1‑100 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAttt > 1:3090021/1‑100 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAttt < 1:94741/100‑1 (MQ=255) atTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGAttt < 1:96525/100‑1 (MQ=255) tttCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTc < 1:3192580/100‑1 (MQ=255) ttCTGACCTGCGGCCCAAGGTGCGGGGCGTGTACCGGAAGCAAATAGTGCAGGAAGATCTGTCCCTGCATTAACTTGGGTGTCGGTACGATCAGATTGCg < 2:1797334/100‑1 (MQ=255) ttCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCg < 1:1571693/100‑1 (MQ=255) ttCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTCCAGGAAGAACCTTCCCTGCATTAACTTGCGTGTCGGTACGATCAGATTTCg < 2:1622480/100‑1 (MQ=255) tCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTAGGTACGATCAGATTTCGc > 2:1597476/1‑100 (MQ=255) cAGACCTGCGGCCCAAACTTCTGCAGTTTTACCGGAAGCAAATACTGCAGTAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCa < 1:599588/100‑1 (MQ=255) gACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATa > 1:3838025/1‑100 (MQ=255) aCCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATCTCGCATaa > 2:168520/1‑100 (MQ=255) ccTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAg > 2:1085727/1‑100 (MQ=255) ccTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAg > 1:3353299/1‑100 (MQ=255) gCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTg < 1:3087364/100‑1 (MQ=255) gCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTg < 1:1683421/100‑1 (MQ=255) cGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGc < 2:1084750/100‑1 (MQ=255) ggCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCa < 1:3805796/100‑1 (MQ=255) gCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCAc < 1:2605869/100‑1 (MQ=255) gCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCAc < 1:1334830/100‑1 (MQ=255) cccAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCAcc < 1:3448305/100‑1 (MQ=255) cccAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCAcc < 1:3055227/100‑1 (MQ=255) cAAACTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGa > 1:479125/1‑100 (MQ=255) tgtCTGCAGTTTTACCGGAAGCAAATACTGCAGTAAGAACTTCCCCTGCATTAACTTGAGTGTCGGTACGATCACAGTTCGCATAACTTGCACCGATAcc < 2:813846/98‑1 (MQ=255) cTTCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATAcc > 1:1750370/1‑100 (MQ=255) ttCTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCg < 2:2507176/100‑1 (MQ=255) cTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGaa > 1:766044/1‑100 (MQ=255) cTGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGaa < 2:3908036/100‑1 (MQ=255) tGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAAt > 1:3830928/1‑100 (MQ=255) tGCATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAAt > 2:2908303/1‑100 (MQ=255) tGCATTTTTAACGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAAt > 2:3680692/1‑100 (MQ=255) cATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATcc > 2:2579761/1‑100 (MQ=255) cATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATcc > 1:1981967/1‑100 (MQ=255) cATTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATcc < 2:619976/100‑1 (MQ=255) aTTTTTACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCt > 1:2350925/1‑100 (MQ=255) ttttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTc > 1:3190093/1‑100 (MQ=255) tttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCg < 2:2073180/100‑1 (MQ=255) tttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCg < 2:2287186/100‑1 (MQ=255) tttACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCg < 2:2221404/100‑1 (MQ=255) tttACCAGAAGCAAATACTGCAGGAAGAACTGTACCTGCATTAACTTGAGTGTCGGTACGATCTGATTTCGCATAGGTTGCGCCGATACCGAATCCTTCg < 2:2426302/100‑1 (MQ=255) tACCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTa > 1:770418/1‑100 (MQ=255) aCCGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAt > 1:604021/1‑100 (MQ=255) ccGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAtt > 1:1786028/1‑100 (MQ=255) ccGGAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAtt > 2:3879825/1‑100 (MQ=255) ggAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTAGTCa > 1:3013376/1‑100 (MQ=255) gAAGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTGGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCAt > 2:3081550/1‑100 (MQ=255) aGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAg > 2:2920019/1‑100 (MQ=255) aGCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAg < 1:1147875/100‑1 (MQ=255) gCAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAgg < 1:2203838/100‑1 (MQ=255) gCAAATACTGCAGGAAAAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAgt > 2:3872247/1‑99 (MQ=255) cAAATACTGCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGt < 1:2721439/100‑1 (MQ=255) | TGGGTTTCAGAATAGGTAGTGGCCAGGTAAATGTTGTTAGCGTCATATTTCAGACCTGCGGCCCAAACTTCTGCATTTTTACCGGAAGCAAATACTTCAGGAAGAACTTTCCCTGCATTAACTTGAGTGTCGGTACGATCAGATTTCGCATAAGTTGCACCGATACCGAATCCTTCGTATTCATAGGTAGC > NC_000913/576041‑576231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |