| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 619,006 | A→C | G251G (GGA→GGC) | fepE → | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 619,006 | 0 | A | C | 98.5% | 451.1 / ‑1.7 | 132 | G251G (GGA→GGC) | fepE | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base C (53/77); total (53/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
AAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGA > NC_000913/618908‑619101 | aaagaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGaa > 2:3607949/1‑100 (MQ=255) aagaaaaaCTGGCTCAGCAGCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACGTTGCCAACGCGGCAGGCAt < 2:646854/100‑1 (MQ=255) agaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAAtt < 1:566420/100‑1 (MQ=255) gaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAACCATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTa < 2:3944197/100‑1 (MQ=255) gaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTa < 1:3727492/100‑1 (MQ=255) gaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTa > 1:2539350/1‑100 (MQ=255) gaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTa < 1:223162/100‑1 (MQ=255) aaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCATTCGACATTGCCAACGCGGCAGGCATTaaa > 2:3056234/1‑100 (MQ=255) aaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTaaaa > 2:83850/1‑100 (MQ=255) aaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTaaaa < 1:743964/100‑1 (MQ=255) aaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTaaaaa < 1:3420222/100‑1 (MQ=255) cTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGc < 1:3892671/100‑1 (MQ=255) ggCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGccc > 2:3058496/1‑100 (MQ=255) gCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCg < 1:60844/100‑1 (MQ=255) cAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGttt < 1:1167554/100‑1 (MQ=255) cAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGttt > 1:913250/1‑100 (MQ=255) ggATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTAc < 1:1640156/100‑1 (MQ=255) ggATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTAc < 1:1729203/100‑1 (MQ=255) aTCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAg < 2:229618/100‑1 (MQ=255) aTCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAg < 2:1406790/100‑1 (MQ=255) aTCGAATTAAAACAAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAg < 2:3275268/100‑1 (MQ=255) tCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGt > 2:2146388/1‑100 (MQ=255) gCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGCCATTGCCAACGCGGCAGGCAGTAAAAAGCCCGTTTACAGTaa < 1:3857830/100‑1 (MQ=255) gCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCCTTAAAAAGCCCGTTTACAGTaa < 1:3410899/100‑1 (MQ=255) gCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTaa > 1:2264156/1‑100 (MQ=255) gCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTaa > 2:1598899/1‑100 (MQ=255) cATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAAt > 1:2298053/1‑100 (MQ=255) cATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAAt < 1:2707550/100‑1 (MQ=255) aTTAAAACGAAAAATCAACTTGATGCAAACATTCATCGCCTCAATTATTCACTCGACATTGCCAACGCTGCAGGCATTAAAAAGCCCGTTTACAGTAATg < 2:2797225/100‑1 (MQ=255) ttAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATgg > 2:3325673/1‑100 (MQ=255) ttAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATgg > 1:1731203/1‑100 (MQ=255) ttAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATgg < 1:2100653/100‑1 (MQ=255) aaaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCa < 1:196532/100‑1 (MQ=255) aaaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCa < 2:1516593/100‑1 (MQ=255) aaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAg < 1:2213787/100‑1 (MQ=255) aaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAg < 1:3686488/100‑1 (MQ=255) aacaaaaaTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAgg < 2:852094/97‑1 (MQ=255) aaaaTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGt < 2:2262435/100‑1 (MQ=255) aaTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTa < 1:1125150/100‑1 (MQ=255) aTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaa > 1:3578130/1‑100 (MQ=255) tCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaaa < 1:3330041/100‑1 (MQ=255) tCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaaa < 2:2717079/100‑1 (MQ=255) tCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaaa < 2:2727971/100‑1 (MQ=255) cAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAg < 1:3149940/100‑1 (MQ=255) cAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAg < 1:3149968/100‑1 (MQ=255) cAACTTGATGCAAACAGTCAGCGACTAAATTATTCTCGCGATATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAg < 2:280934/100‑1 (MQ=255) aaCTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAACGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGa < 2:1622695/100‑1 (MQ=255) ttGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGa > 2:2630691/1‑100 (MQ=255) gATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAcc > 1:1478546/1‑100 (MQ=255) aTGCACACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAACAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAccc < 1:3869568/100‑1 (MQ=255) aTGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAccc < 1:3310112/100‑1 (MQ=255) aTGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTCTACAGTAATGGTCAGGCCGTTAAAGATGAccc < 1:3310983/100‑1 (MQ=255) tGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAcccc < 2:3929159/100‑1 (MQ=255) tGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAcccc > 1:3645678/1‑100 (MQ=255) cAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGa > 2:3309002/1‑100 (MQ=255) cAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGa > 2:2089884/1‑100 (MQ=255) cAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTATACAGTAATGGTCAGGCCGTTAAAGATGACCCCGa > 2:3950987/1‑100 (MQ=255) aaCATTCAGCGCCTCAATTATTCACGCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAtt < 1:2218591/100‑1 (MQ=255) aCATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAttt < 1:493096/100‑1 (MQ=255) aCATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAttt < 1:513279/100‑1 (MQ=255) ttCGGCGCTTCAATTATTCACTCGCCATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTc < 2:1894801/100‑1 (MQ=255) ttCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTc < 2:2047876/100‑1 (MQ=255) ttCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTc < 2:2249322/100‑1 (MQ=255) tCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCt < 1:1934571/100‑1 (MQ=255) caacgcCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTAACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa < 1:3466704/97‑1 (MQ=255) cAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa > 1:1287295/1‑100 (MQ=255) cAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa < 2:28843/100‑1 (MQ=255) aGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTAt < 1:1179552/100‑1 (MQ=255) gcgcCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTAtt > 1:2558220/1‑100 (MQ=255) gcCTCAAGTATTCACTCCACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtc < 1:259148/100‑1 (MQ=255) ccTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtct > 1:3997457/1‑100 (MQ=255) cTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctc > 1:2637527/1‑100 (MQ=255) cTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAACCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctc > 2:3126327/1‑100 (MQ=255) tCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctct > 1:2695313/1‑100 (MQ=255) aaTTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTTTTTTTTTCTCg > 2:2652375/1‑100 (MQ=255) aaTTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCg > 1:3023854/1‑100 (MQ=255) aaTTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCg > 1:2880323/1‑100 (MQ=255) attattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCgg < 2:3609467/100‑1 (MQ=255) attattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCgg < 1:4003956/100‑1 (MQ=255) ttattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCTTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCggn < 1:829589/100‑2 (MQ=255) tattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTg < 1:2821150/100‑1 (MQ=255) attCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGc < 1:548086/100‑1 (MQ=255) ttCACTCGACATTGCCAACGCGGCAGGCATTAACAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCa < 1:4034272/100‑1 (MQ=255) cACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGa > 2:652388/1‑100 (MQ=255) aCTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGAc > 1:2867282/1‑100 (MQ=255) cTCGACATTGCCAACGCGGCAGGCATTAAAAATCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACg < 1:3740033/100‑1 (MQ=255) cTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACg > 2:3441758/1‑100 (MQ=255) tctaCATTGCCAACGCTATCGGCAATAAAAAGCCCACTTACAAGAATTATCAGGCCGTTAATGTTGACCCCGATTTTCCTATTTCTCTCGGTGCAGACgg < 2:1109960/97‑1 (MQ=255) gACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTa > 2:2615290/1‑100 (MQ=255) aCATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTAt > 2:76593/1‑100 (MQ=255) ttGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGa < 1:408848/100‑1 (MQ=255) gCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAGCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc < 1:3538111/100‑1 (MQ=255) gCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc < 1:2307222/100‑1 (MQ=255) gCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc < 2:1963121/100‑1 (MQ=255) ccAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACg < 1:1461831/100‑1 (MQ=255) aaCGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCa < 1:1848228/100‑1 (MQ=255) cgcgGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCaaa > 2:2764326/1‑100 (MQ=255) gCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTTTTTTTTTTTCGGTGCAGACGGTATTGAACGCAAACTgg > 2:512482/1‑100 (MQ=255) gCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTgg < 2:1232734/100‑1 (MQ=255) gCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTgg > 2:1830962/1‑100 (MQ=255) | AAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGA > NC_000913/618908‑619101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |