| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 75,116 | T→G | Y122S (TAT→TCT) | thiB ← | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 75,116 | 0 | T | G | 94.1% | 406.5 / 12.8 | 136 | Y122S (TAT→TCT) | thiB | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (1/7); new base G (63/65); total (64/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.60e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.62e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTG > NC_000913/75017‑75211 | tAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAt > 2:582628/1‑100 (MQ=255) aTCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAAt > 1:3642139/1‑100 (MQ=255) tCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATc < 2:1553225/100‑1 (MQ=255) tCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATc < 1:1539374/100‑1 (MQ=255) cACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCa < 2:974805/100‑1 (MQ=255) cACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCa < 2:40277/100‑1 (MQ=255) cACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCa > 1:681451/1‑100 (MQ=255) cccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCaaa > 2:1489879/1‑100 (MQ=255) cccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCGTGGTGGCGGGTTTTTCAGTGTGGGCTCGGCATAAACGAAGGCTAAGGATCCAGAATCaaa > 2:3023841/1‑100 (MQ=255) ccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAAc < 1:1441808/100‑1 (MQ=255) ccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAAc < 1:714478/100‑1 (MQ=255) ccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAAc < 1:2179689/100‑1 (MQ=255) cGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACg < 1:1615404/100‑1 (MQ=255) aGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTAc > 1:3660013/1‑100 (MQ=255) gTTTTGATCGCTCTCAACCAGTTCTATCAGGCTTTGTGGCGGGGGTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACg > 1:1299935/1‑100 (MQ=255) tttGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGaa > 1:2084028/1‑100 (MQ=255) tGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAg < 2:1460680/100‑1 (MQ=255) tGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAg > 2:2009250/1‑100 (MQ=255) tGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAg < 1:3411649/100‑1 (MQ=255) tGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAg < 1:2631744/100‑1 (MQ=255) gATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAgt > 1:3441411/1‑100 (MQ=255) aTCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAgtg > 2:3921254/1‑100 (MQ=255) ctctCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCat < 1:502410/100‑1 (MQ=255) cAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGGCcttatt > 1:135840/1‑100 (MQ=255) cAACCAGTTCTATCAGGCTTTGTGGCGGGTTTTTCAGGTTGTTCTTGTCATACAAGACGGCGAAGTAGCCAGCATCAAACGGTACGAAAGCGTCattatt > 2:3444295/1‑100 (MQ=255) aaCCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTc < 2:116216/100‑1 (MQ=255) aaCCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTc > 2:1295383/1‑100 (MQ=255) aCCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTcc > 2:2870009/1‑100 (MQ=255) aCCAGTTCTTTCACGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATCAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTcc < 1:3681373/100‑1 (MQ=255) cAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAg > 1:94005/1‑100 (MQ=255) cAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAg < 2:405102/100‑1 (MQ=255) gTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGACAGTGTCATTATTCCAgcc > 1:3824209/1‑100 (MQ=255) cTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAgccggc < 2:3706068/100‑3 (MQ=255) cTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAgccgcc > 2:3968972/1‑100 (MQ=255) cTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAgccgcc > 2:2586198/1‑100 (MQ=255) cTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAgccgcc > 1:3645799/1‑100 (MQ=255) ttCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGccgccgn < 2:1110041/100‑2 (MQ=255) ttCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCgg < 1:2592189/100‑1 (MQ=255) ttCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCgg < 2:830268/100‑1 (MQ=255) cAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGa > 2:108572/1‑100 (MQ=255) ggCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGGGAAGTAGCCAGAATCAAACGGTACGGAAGTGTCATTATTCCAGCCGCCGGGAAc > 2:2787358/1‑100 (MQ=255) ggCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAAc < 1:55034/100‑1 (MQ=255) ggCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAAc > 2:2474573/1‑100 (MQ=255) gCTTTGTGGCGGGTTTTTCAGTTTGTTCTGGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACg < 1:236414/100‑1 (MQ=255) cTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGt > 1:2503470/1‑100 (MQ=255) cTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGt > 1:2375775/1‑100 (MQ=255) cTTGGTGGCGGGTTTTTCAGTTTGTTCTTGGCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGt < 1:2663294/100‑1 (MQ=255) gtgGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAAc > 2:1466687/1‑100 (MQ=255) tggtggGTTTCTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATT‑CAGCCGCCGGGAACGTTAACgg > 2:3677036/1‑100 (MQ=255) ggCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACgg > 1:1253274/1‑100 (MQ=255) gCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACggn < 1:3248931/100‑2 (MQ=255) cGGGTTTTTCAGTTTTTTCTCGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCa > 2:1156617/1‑100 (MQ=255) cGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCa > 1:2894146/1‑100 (MQ=255) ggTTTTTCAGTTTGTTCTGGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCAta < 2:3621139/100‑2 (MQ=255) gTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATcc > 2:2457097/1‑100 (MQ=255) tttttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCg < 1:154033/100‑1 (MQ=255) ttttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGc > 1:3216524/1‑100 (MQ=255) ttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTg > 2:571004/1‑100 (MQ=255) tCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGTCACAAGCGGTACGAATGTGTCATTTTTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGc < 1:1424261/100‑1 (MQ=255) tCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGc < 2:3342329/100‑1 (MQ=255) cAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTCTTCCAGCCGCCGGGAACGTTAACGGCATCCGCGGcc > 2:3618373/1‑100 (MQ=255) cAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGcc < 2:2855551/100‑1 (MQ=255) cAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGcc < 2:2051664/100‑1 (MQ=255) gTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCcac < 1:1477947/100‑1 (MQ=255) gTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCcac < 1:2513225/100‑1 (MQ=255) ttGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCacac < 2:945293/100‑1 (MQ=255) tGTTCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACAcc < 1:1479687/100‑1 (MQ=255) tCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCt < 1:870472/100‑1 (MQ=255) tCTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCt > 2:45230/1‑100 (MQ=255) cTTGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCtt > 2:877155/1‑100 (MQ=255) ttGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCttt > 2:680160/1‑100 (MQ=255) tGTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCtttt > 1:2796970/1‑100 (MQ=255) gTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTg < 2:1627638/100‑1 (MQ=255) gTCATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTg > 1:1344365/1‑100 (MQ=255) cATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGc < 1:3337751/100‑1 (MQ=255) cATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGc > 2:1871297/1‑100 (MQ=255) cATAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGc > 1:654547/1‑100 (MQ=255) aTAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCGTTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCa < 2:3262047/100‑1 (MQ=255) aTAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCa > 1:81175/1‑100 (MQ=255) aTAAACGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCa > 2:3172410/1‑100 (MQ=255) aaCGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAAc < 2:91737/100‑1 (MQ=255) aaCGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAAc > 2:1699970/1‑100 (MQ=255) cGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAg < 1:1154936/100‑1 (MQ=255) cGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAg < 1:2495458/100‑1 (MQ=255) cGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAg < 1:2748944/100‑1 (MQ=255) cGAAGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAg < 1:2811910/100‑1 (MQ=255) aaGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTc < 1:448733/100‑1 (MQ=255) aGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc > 1:359820/1‑100 (MQ=255) aGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc < 1:721553/100‑1 (MQ=255) aGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc < 1:2141736/100‑1 (MQ=255) aGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc > 1:853559/1‑100 (MQ=255) aGGCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc > 1:1405117/1‑100 (MQ=255) gCGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCgg < 2:3589886/100‑1 (MQ=255) cGAAGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGt > 2:2803935/1‑100 (MQ=255) aagaagCAAGAATCAAACGGGACGAAAGTGTCTTTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGttt < 2:3429738/100‑1 (MQ=255) aaGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGttt < 2:1553580/100‑1 (MQ=255) aaGTAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGttt > 1:924151/1‑100 (MQ=255) tAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTAc > 1:2886627/1‑100 (MQ=255) tAGCCAGAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTAc < 1:1087252/100‑1 (MQ=255) gCCAGAATCAAACGGTACGAAAGTGTCATTATTCCGGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTg < 2:446411/100‑1 (MQ=255) | TAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTG > NC_000913/75017‑75211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |