| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 76,539 | T→G | E254A (GAA→GCA) | sgrR ← | transcriptional DNA‑binding transcriptional activator of sgrS sRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 76,539 | 0 | T | G | 98.8% | 574.5 / ‑1.9 | 166 | E254A (GAA→GCA) | sgrR | transcriptional DNA‑binding transcriptional activator of sgrS sRNA |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (78/86); total (79/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01 | |||||||||||
Only 100 of 166 total aligned reads displayed.
GAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCG > NC_000913/76442‑76635 | gAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGcg > 1:1328834/1‑100 (MQ=255) ccTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCgg > 1:3854511/1‑100 (MQ=255) ctaaaTTCTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGc < 2:242827/97‑1 (MQ=255) cTGAAGTTTCAGTTGATGGGTGCGGTTGCGAATCACGGCATGCGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGc > 2:805995/1‑100 (MQ=255) tGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCa < 1:3693584/100‑1 (MQ=255) tGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCa < 1:247104/100‑1 (MQ=255) gAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCGAAGTTACTGAGGGTTTCCCATGCGCGCGGCAg < 1:957234/100‑1 (MQ=255) gAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAg < 2:2142365/100‑1 (MQ=255) aaTTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAgg < 1:2760301/100‑1 (MQ=255) aTTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGa < 2:3616591/100‑1 (MQ=255) aTTTTCAGTTGATTGGTGCTGTTACGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGa > 1:2760895/1‑100 (MQ=255) ttttCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGat > 1:1592083/1‑100 (MQ=255) ttgtCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGat > 1:613051/4‑100 (MQ=255) tttCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGatc < 2:666186/100‑1 (MQ=255) ttCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGatca > 2:347572/1‑100 (MQ=255) cAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGatcatc > 1:1352763/1‑100 (MQ=255) aGTTGATTTGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCg < 1:1081946/100‑1 (MQ=255) ttGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGcc < 1:1549856/100‑1 (MQ=255) tGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAAc > 1:1428003/1‑100 (MQ=255) tGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAAc > 1:1175149/1‑100 (MQ=255) ggTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACt < 2:2927557/100‑1 (MQ=255) tGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTg > 1:568358/1‑100 (MQ=255) tgtgGCGAATCACCGCCTACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGCGGTTCCCATGCGCGCGGCAGGAGCATCGCCGGAACTTGccc < 2:3075438/100‑1 (MQ=255) tGTTGCGAATCACCGCATACGGACCGGTGCCGATCGGATGGCTGGCAAACTTACTGAGGGTTTCCCATGCGCGCGGCCGGATCATCGCCGGAACTTGccc > 2:3697247/1‑100 (MQ=255) gTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGcccc > 2:1671829/1‑100 (MQ=255) cggCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCca < 1:1023276/98‑1 (MQ=255) tGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCcag < 1:736342/100‑1 (MQ=255) cGAATCACCGCATACGGACCGGTGCTGGTGGGATGGCTGGCAAAGTTACTGAGGGTTTCCTATGCGCGCGGCAGGATCCTCGCCGGAACTTGCCCcagca < 2:1549900/100‑1 (MQ=255) gAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCcagcag < 2:2031165/100‑1 (MQ=255) gAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCcagcag < 1:1213578/100‑1 (MQ=255) cACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAAc < 1:2836786/100‑1 (MQ=255) cACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAAc < 2:2777675/100‑1 (MQ=255) aCCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACg > 1:1880331/1‑100 (MQ=255) aCCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACg < 1:4026100/100‑1 (MQ=255) ccGCATACGGACCGGTGCCGATGGGATGGCTGGCAAATTTACTGAGGGTTCCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACgg < 2:3838167/100‑1 (MQ=255) ccGCATACGGACCGGGGCCGATGGGCTGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCGGCAGTAACgg < 2:2204151/100‑1 (MQ=255) gCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTa > 1:3613419/1‑100 (MQ=255) tACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAAcc < 1:1849329/100‑1 (MQ=255) tACGGACCAGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAAcc < 2:1430791/100‑1 (MQ=255) aCGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGGTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCa > 2:2581467/1‑100 (MQ=255) cGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAg > 1:3720689/1‑100 (MQ=255) ggACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGc > 1:2864342/1‑100 (MQ=255) ggACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGc < 1:2005137/100‑1 (MQ=255) ggACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGc < 1:2897318/100‑1 (MQ=255) gACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCg < 1:2010815/100‑1 (MQ=255) aCCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCgg < 1:2971316/100‑1 (MQ=255) cGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTc < 2:847510/100‑1 (MQ=255) ggTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTcc > 1:1415780/1‑100 (MQ=255) ggTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTcc > 1:535071/1‑100 (MQ=255) ggTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTcc > 1:1169087/1‑100 (MQ=255) gTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCg < 1:3102033/100‑1 (MQ=255) tGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCCGCAGTAACGGTAACCAGCGGTCCgg > 2:2583988/1‑100 (MQ=255) tGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCgg < 2:2821218/100‑1 (MQ=255) gCCGATGGGATGGCTTGCAAAGTTACAGAGGGTTTCCCATGCGCGCGGCAGGCACATCGCCGGAACTGGCCTCACCCGTAACGCTAACCACCGGTCCgct > 2:1377260/1‑98 (MQ=255) ccGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGtt > 2:3588489/1‑100 (MQ=255) cGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCGTCGCCGGAGCTTGCCCCAGCAGTAACGGTAACCAGCGGGCCGGtta > 2:1334435/1‑99 (MQ=255) cGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTg > 2:78679/1‑100 (MQ=255) gatgggatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTgt > 1:3525682/1‑99 (MQ=255) gatgggatggCTGGCAAAGTGACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGc < 1:80045/100‑1 (MQ=255) atgggatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCg < 2:519789/100‑1 (MQ=255) tgggatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGt > 1:2675217/1‑100 (MQ=255) tgggatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGt < 1:931394/100‑1 (MQ=255) ggatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTga > 2:2105484/1‑100 (MQ=255) gatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTgag < 1:740352/100‑1 (MQ=255) gatggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTgag < 2:3773540/100‑1 (MQ=255) atggCTGGCAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTgaga > 2:613214/1‑100 (MQ=255) gctggcAAAGTTACTGAGGGTTTCCCATGCTCGCGGCAGGATCATCGCTGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATgg < 1:3886215/100‑1 (MQ=255) ctggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGa < 2:2760256/100‑1 (MQ=255) ctggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGa > 1:2636143/1‑100 (MQ=255) ctggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGa > 1:828838/1‑100 (MQ=255) tggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat > 2:1632498/1‑100 (MQ=255) tggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat > 1:1729834/1‑100 (MQ=255) tggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat < 1:1463848/100‑1 (MQ=255) ggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGata < 2:2302279/100‑1 (MQ=255) ggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGata > 2:916507/1‑100 (MQ=255) ggcAAAGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGata < 1:428800/100‑1 (MQ=255) aaaGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATcc > 2:843749/1‑100 (MQ=255) aaGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa > 2:768380/1‑100 (MQ=255) aaGTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa > 1:2277515/1‑100 (MQ=255) gTTACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGCCCGGTTGCGTGAGAGGGATATCCAGc > 2:1118664/1‑100 (MQ=255) ttACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCg < 1:2738763/100‑1 (MQ=255) ttACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCg < 1:313735/100‑1 (MQ=255) ttACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCg > 1:46294/1‑100 (MQ=255) tACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGt > 2:2906744/1‑100 (MQ=255) tACTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGt < 1:2061748/100‑1 (MQ=255) cTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTcc < 2:2992796/100‑1 (MQ=255) cTGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTcc > 2:1764564/1‑100 (MQ=255) tGAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCa < 2:732653/100‑1 (MQ=255) gAGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAg < 1:1301177/100‑1 (MQ=255) aGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAgg > 1:2180032/1‑100 (MQ=255) aGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAgg < 1:3920812/100‑1 (MQ=255) aGGGTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAgg < 2:2632637/100‑1 (MQ=255) gggTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAggg > 2:243361/1‑100 (MQ=255) gggTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGGCCAggg > 2:1360246/1‑100 (MQ=255) gTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCg > 1:2132546/1‑100 (MQ=255) gTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCg < 2:3087128/100‑1 (MQ=255) gTTTCCCATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCg < 1:3551392/100‑1 (MQ=255) nccATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCgg > 1:3241152/2‑100 (MQ=255) cccATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCgg > 1:689856/1‑100 (MQ=255) ccATGCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGc < 2:1490556/100‑1 (MQ=255) | GAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCG > NC_000913/76442‑76635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |