| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,134,118 | A→C | Q106P (CAG→CCG) | flgF → | flagellar component of cell‑proximal portion of basal‑body rod |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,134,118 | 0 | A | C | 98.7% | 529.9 / ‑4.4 | 153 | Q106P (CAG→CCG) | flgF | flagellar component of cell‑proximal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (62/89); total (63/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
ACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTG > NC_000913/1134021‑1134213 | acCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCgg < 2:2591276/100‑1 (MQ=255)acCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCgg < 1:3878483/100‑1 (MQ=255)acCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCgg < 1:646488/100‑1 (MQ=255)acCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCgg < 2:1937492/100‑1 (MQ=255) ccTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGAGGGCTGGCTGGCCGTGCAGACCGCTGACGGCATCGGAGGGTATACGCGTACTGGCAGCATTCCGGt > 2:714563/1‑100 (MQ=255) cTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGtt > 2:1994288/1‑100 (MQ=255) tCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTg < 1:1836496/100‑1 (MQ=255) gcgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTTATGGCAGCATTCCGGTTGAt < 1:3179010/100‑1 (MQ=255) ngcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATc > 1:3249039/2‑100 (MQ=255) cgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATc > 1:2923479/1‑100 (MQ=255) cgcCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGATATACGCGTAATGGCAGCATTCCGGTTGATc < 1:3277175/100‑1 (MQ=255) ccGCTGGACGTCGCGTGGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCa < 1:1920388/100‑1 (MQ=255) cgcgGGACGCCGCGTTGCAGCAGGATGGCTGGCTGGCTGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCAc < 2:2072400/100‑1 (MQ=255) cGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCAc > 1:396901/1‑100 (MQ=255) gCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCAcc < 1:2063197/100‑1 (MQ=255) cTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGTAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCg < 1:1077348/100‑1 (MQ=255) cTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGTAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCg < 1:762656/100‑1 (MQ=255) cTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTCTACGCGTAATGGCAGCATTCCGGTTGATCCCACCg > 2:1372335/1‑100 (MQ=255) ggACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCggg < 2:263717/100‑1 (MQ=255) ggACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCggg > 2:2647284/1‑100 (MQ=255) gTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAAc < 1:1689892/100‑1 (MQ=255) gTCGCGTTGCAGCAGGAAGGCTGGCTGGGCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGGTCCCACCGGGCAAc > 2:644818/1‑100 (MQ=255) tCGCGTTGCAGTAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACt < 2:3198499/100‑1 (MQ=255) tCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACt > 2:896555/1‑100 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc < 1:2656102/100‑1 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc < 2:3977321/100‑1 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGAc < 2:3975154/100‑1 (MQ=255) cgTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGAGAAGCGTATACGCGTAATAGCAGCATTCCGGCTGATCCCACCGGGCAACTGAc > 2:2311457/1‑100 (MQ=255) gTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACa > 2:3559166/1‑100 (MQ=255) gTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACa < 1:1434388/100‑1 (MQ=255) ttGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACaa < 1:3212456/100‑1 (MQ=255) tGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAAt < 1:3477935/100‑1 (MQ=255) tGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAAt < 2:3017274/100‑1 (MQ=255) agcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCa < 2:2898724/100‑1 (MQ=255) agcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCa > 1:571942/1‑100 (MQ=255) gcagGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAg < 1:3540094/100‑1 (MQ=255) gcagGATGGCTGGCTCGCCCTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAg < 2:1005297/100‑1 (MQ=255) ggATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAgggg < 2:164127/100‑1 (MQ=255) gATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGc < 2:531751/100‑1 (MQ=255) gATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGc < 1:1233250/100‑1 (MQ=255) tgctggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATc < 1:3318264/99‑1 (MQ=255) gctggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATcc < 1:3689612/100‑1 (MQ=255) gctggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATca > 2:3263509/1‑99 (MQ=255) tggctggcCGTGCAGACCGCTGAGGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCAACCgg < 2:3396995/100‑1 (MQ=255) tggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCgg > 1:3432160/1‑100 (MQ=255) ggctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGt > 2:1116784/1‑100 (MQ=255) gctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTg < 2:625415/100‑1 (MQ=255) ctggcCGTGCAGACCGCTGACGGCAGCGAATGGTATACGCGTAATAGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGa > 1:3543566/1‑100 (MQ=255) ctggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGa < 2:2498647/100‑1 (MQ=255) tggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGAt < 2:1483186/100‑1 (MQ=255) nggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGAt > 1:1646990/2‑100 (MQ=255) ggcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATa > 1:1489805/1‑100 (MQ=255) gcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGCCAATTCAGGGGCATCCGGTGATAg > 2:236775/1‑100 (MQ=255) gcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAg > 2:538356/1‑100 (MQ=255) gcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAg > 2:3118726/1‑100 (MQ=255) gcCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAg > 1:1576600/1‑100 (MQ=255) cGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGc < 1:462384/100‑1 (MQ=255) cGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGc < 2:656361/100‑1 (MQ=255) cGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGc < 1:2379054/100‑1 (MQ=255) tGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGa > 1:182220/1‑100 (MQ=255) gCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAg < 1:925709/100‑1 (MQ=255) cAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAgg > 1:3309349/1‑100 (MQ=255) cAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTAGATCCCACCGCGCAACTGACAATTCCGGGGCATCCGGTCACAGGCCAgg > 2:3940582/1‑100 (MQ=255) ccGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTgg > 1:3058989/1‑100 (MQ=255) cGCTGACGGCAGCGAAGGGTATACGCATAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTggg < 2:1872644/100‑1 (MQ=255) gCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGc > 2:728821/1‑100 (MQ=255) gCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGc > 1:2017718/1‑100 (MQ=255) tgcaCGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGcn < 2:1478460/97‑2 (MQ=255) cTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGcc < 1:3496849/100‑1 (MQ=255) tGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCa > 2:627325/1‑100 (MQ=255) aCGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAt < 2:138963/100‑1 (MQ=255) cGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAAtt > 1:2812859/1‑100 (MQ=255) gCAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGc > 2:2345373/1‑100 (MQ=255) cAGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCt > 1:690529/1‑100 (MQ=255) cAGCGAAGGGTATACGCGGAATGGCAGCATTCCAGTTGATCCCACCGGGCAACTGACAATTCAGAGGCATCCGGTGATAGGCGCGGCTGGGCCAATTGCt > 2:2835996/1‑100 (MQ=255) aGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtg < 2:1623299/100‑1 (MQ=255) aGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtg < 2:2068533/100‑1 (MQ=255) aGCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtg < 1:2778524/100‑1 (MQ=255) gCGAAGGGTATACGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCtgt > 1:2629024/1‑100 (MQ=255) gAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGc > 2:3713477/1‑100 (MQ=255) tataCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAg < 2:607339/100‑1 (MQ=255) ataCGCGTAATGGCAGCATTCCGGTTGCTCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgg < 1:745804/100‑1 (MQ=255) taCGCGTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAggg > 2:2456905/1‑100 (MQ=255) aCGCGTAAGGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAgggg < 2:3347877/100‑1 (MQ=255) gcgTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCg < 2:2982802/100‑1 (MQ=255) cgTAATGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCgg < 2:391293/100‑1 (MQ=255) aTGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAAt < 1:202210/100‑1 (MQ=255) tGGCAGCATTCCGGTTGATCCCACCGGGCAATTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGACATTTGCTGTGCCGGAAGGGGCGGAAATc > 2:3805116/1‑100 (MQ=255) tGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATc < 1:61686/100‑1 (MQ=255) tGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATc > 1:1744138/1‑100 (MQ=255) tGGCAGCATTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATc < 1:1921718/100‑1 (MQ=255) ggCAGCATTCCGGTTGATCCGACCGGGCAACTGACAATTCAGGGGCATTCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAAtga > 2:3985828/1‑98 (MQ=255) gcagcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCAc < 1:3020431/100‑1 (MQ=255) gcagcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCAc < 1:3020466/100‑1 (MQ=255) gcagcaTTCCGGGTGATCCCGCCGGGCGACTGGCCATTCAGGGGCATCGGGTGGTAGGCGTGGCTGGGCAAATGGCTGGGCCGAAAGGGGCGGAAATCAc < 2:603711/100‑1 (MQ=255) gatctaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCAc < 2:2570891/95‑1 (MQ=255) cagcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTCGGCCAATTGCTGTGACGGAGGGGGCGGAAATCACt > 2:1777065/1‑100 (MQ=255) gcaTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTAt > 1:3205599/1‑100 (MQ=255) aTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCAcagatc > 1:2610740/1‑95 (MQ=255) aTTCCGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATtg > 1:2116573/1‑100 (MQ=255) | ACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTG > NC_000913/1134021‑1134213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |