| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,019,670 | T→G | I18S (ATT→AGT) | fliL → | flagellar biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,019,670 | 0 | T | G | 99.2% | 406.5 / NA | 121 | I18S (ATT→AGT) | fliL | flagellar biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (59/61); total (59/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GATAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGATTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCAACGCGT > NC_000913/2019573‑2019766 | gATAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTc < 1:745837/100‑1 (MQ=255) aTAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCt > 2:3533382/1‑100 (MQ=255) tAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGCTTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTAGATCCCGAGTCTg > 1:3679115/1‑100 (MQ=255) tAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTg < 1:3503273/100‑1 (MQ=255) ttAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTa < 1:366548/100‑1 (MQ=255) ttAGCCGATAAGCAGTAGCGACACAGGAAGACAGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTa < 2:1248500/100‑1 (MQ=255) tAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTAt > 1:1859178/1‑100 (MQ=255) tAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTAt < 1:325619/100‑1 (MQ=255) ccGATAAGCAGTAGCGACACAGGAAGACCGCACCACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCa < 1:190110/100‑1 (MQ=255) ccGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCa < 1:2554186/100‑1 (MQ=255) ccGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCa < 2:2836317/100‑1 (MQ=255) ccGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCa > 1:2330792/1‑100 (MQ=255) cGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCAt > 2:2276994/1‑100 (MQ=255) tctaGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTGTGGTATTCATTa < 1:3510342/97‑1 (MQ=255) tAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCTATAAGCAAGAAAAGCAAGCGATCGCTTTGGAGCCCGAGTCTGGTATTCATTAc < 2:2764828/100‑1 (MQ=255) tAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAc < 1:1188966/100‑1 (MQ=255) tAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAc < 1:2815570/100‑1 (MQ=255) aGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTaaga > 2:3435275/1‑97 (MQ=255) aGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAccc < 2:3851194/100‑1 (MQ=255) aGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAccc > 1:1437711/1‑100 (MQ=255) aGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAccc < 1:653109/100‑1 (MQ=255) aGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTAccc > 1:1830262/1‑100 (MQ=255) gCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCt > 2:1229870/1‑100 (MQ=255) gCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCt > 1:3779871/1‑100 (MQ=255) gTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTcgc < 2:288703/100‑1 (MQ=255) gTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTcgc > 1:2140830/1‑100 (MQ=255) tAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTcgcg > 2:131111/1‑100 (MQ=255) gACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCt > 1:2930895/1‑100 (MQ=255) acacAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtg < 2:121364/100‑1 (MQ=255) acacAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtg < 2:1202186/100‑1 (MQ=255) acacAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtg < 1:3503418/100‑1 (MQ=255) acacAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtg < 1:2268550/100‑1 (MQ=255) acacAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtg < 2:1600153/100‑1 (MQ=255) cacaGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtgt > 2:2747930/1‑100 (MQ=255) cacaGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCtgt > 1:3483701/1‑100 (MQ=255) caGGAAGACCGCAACACGTGACTGATTACGCGATAAGCAAGAAAGGAAAGCGATCGCTTTGGATGCCGAGGCTGGTATTTATCACACGCGCGGCCTGTGc < 2:1718303/100‑1 (MQ=255) gAAGACCGCAACACATGGCTGATTATCCAATAAGCAAGAAAAGCATGCGATCGCTTTGGGTCCCGCGTCTCGTATTCATTACTCTTCCGTACTGTTCCAg < 2:558548/100‑1 (MQ=255) gAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAg > 1:916659/1‑100 (MQ=255) gAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAg < 1:2497587/100‑1 (MQ=255) gAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAg < 1:2270033/100‑1 (MQ=255) caGACCGCAACACATGACTGATTCCGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGCTCCCGCGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAgc < 2:1179997/99‑1 (MQ=255) aGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAgcg > 2:404359/1‑100 (MQ=255) aGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAgcg < 1:1766529/100‑1 (MQ=255) gACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAgcgc > 1:2423407/1‑100 (MQ=255) aCCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCa < 1:2792046/100‑1 (MQ=255) ccGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAg > 2:2338504/1‑100 (MQ=255) ccGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAg > 2:3521363/1‑100 (MQ=255) cGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAgg < 1:3967401/100‑1 (MQ=255) gCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTCTTCATTACCCTCGCGGCCTGTGCCAGCGCAGGt > 1:4034444/1‑100 (MQ=255) gCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGt > 2:796502/1‑100 (MQ=255) acacATGACTGATTACGTTATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGATTCTTGTATCCATTACCCTCGCGGCCTTTGCCAGCCCGGGTTAc < 2:3869815/100‑1 (MQ=255) acacATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTAc > 2:876743/1‑100 (MQ=255) acacATGACTGATTACGAGATAAGCAAGAAACGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTAc < 2:421752/100‑1 (MQ=255) acaTGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAg < 2:1607292/100‑1 (MQ=255) caTGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGc > 1:962005/1‑100 (MQ=255) caTGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGc < 2:1447104/100‑1 (MQ=255) aTGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCt > 1:2035476/1‑100 (MQ=255) tGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTa > 1:780841/1‑100 (MQ=255) tGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTa > 1:2376717/1‑100 (MQ=255) gACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTAc < 2:3880281/100‑1 (MQ=255) cTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTg < 1:3695801/100‑1 (MQ=255) cTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTg > 1:2655278/1‑100 (MQ=255) gATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGc < 2:1407109/100‑1 (MQ=255) aTTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCa > 1:3923701/1‑100 (MQ=255) ctACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCAt < 1:580943/99‑1 (MQ=255) tACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCAtt < 1:2596223/100‑1 (MQ=255) aCGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCAtag > 2:569174/1‑98 (MQ=255) aCGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTc > 2:1913433/1‑100 (MQ=255) cgATAAGCAAGAAAAGCAAGCGATCACTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCa < 1:2450671/100‑1 (MQ=255) aTAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATc < 2:506341/100‑1 (MQ=255) aaGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAg > 1:2266449/1‑100 (MQ=255) aGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAgg < 1:3433259/100‑1 (MQ=255) gCAATAAAAGCGAGCGATCGCTTTGGATCTCGAGTCTGGTATGCATTAACCTCGCGGCTTGTGGCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGt > 2:646427/1‑100 (MQ=255) gCAAGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGt > 1:900623/1‑100 (MQ=255) aaGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTg > 1:4024645/1‑100 (MQ=255) aGAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGc > 1:1038302/1‑100 (MQ=255) gAAAAGCAAGCGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGcc > 1:2741308/1‑100 (MQ=255) agcaatcGATCGCTTTGTATCCTGAGTCTAATATTCATTACCCTCGCGGGCTGTGCCAGTGCAGGTTACAGCAACTGGCATTCGCAGCAGCTTGCCGCtt < 2:247777/100‑2 (MQ=255) gcaagcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTga > 1:923799/1‑100 (MQ=255) caagcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTgac < 1:31873/100‑1 (MQ=255) caagcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTgac < 2:3914316/100‑1 (MQ=255) caagcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTgac < 2:1326284/100‑1 (MQ=255) aagcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTgacg < 1:569251/100‑1 (MQ=255) gcGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGTATTCGCATCAGGTTGCCGCTgacgac > 2:3225655/1‑100 (MQ=255) cGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACa > 2:927242/1‑100 (MQ=255) cGATCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACa > 2:2060691/1‑100 (MQ=255) aTCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACaaa > 2:2509122/1‑100 (MQ=255) tCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAg > 2:291514/1‑100 (MQ=255) tCGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAg < 2:2143859/100‑1 (MQ=255) cGCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAgc < 1:2264089/100‑1 (MQ=255) gCTTTGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAgcg < 2:3088101/100‑1 (MQ=255) cTTTGGATCCCGAGTCTGGTATTCATTACCCTCGAGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAgcgc < 2:1857756/100‑1 (MQ=255) ttGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCgcag < 1:595591/100‑1 (MQ=255) tGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCgcagc > 2:2663509/1‑100 (MQ=255) tGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCgcagc > 2:2207415/1‑100 (MQ=255) tGGATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCgcagc < 1:1914370/100‑1 (MQ=255) tGGATCCCGAGCCTGGTATTCATTACCCTCGCGGACTGTGCCAGCGCAGGTTAAAGCTACTGGCATTCGCATCAGGTTTCCGCTGACGATAAAGCgcagc > 2:3693171/1‑100 (MQ=255) ggATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCgcagca > 1:1048074/1‑100 (MQ=255) gATCCCGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCaa > 2:407628/1‑100 (MQ=255) cGAGTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTATAGCTACTGACATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCAACGcgt > 1:3625107/1‑100 (MQ=255) | GATAATTAGCCGATAAGCAGTAGCGACACAGGAAGACCGCAACACATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGATTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCAACGCGT > NC_000913/2019573‑2019766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |