Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,386,8620GA38.6% 71.4 / 52.6 70intergenic (+31/‑72)yfbL/yfbMputative M28A family peptidase/DUF1877 family protein
Reads supporting (aligned to +/- strand):  ref base G (2/41);  new base A (27/0);  total (29/41)
Fisher's exact test for biased strand distribution p-value = 2.23e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTT  >  NC_000913/2386633‑2387079
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                  
aGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGTGCCAC‑A‑AAAAACGaaaagc                                                                                                                                                                                                                            >  1:102648/1‑233 (MQ=255)
  ggTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAG‑A‑AAAAAAGA‑CATGca‑ca                                                                                                                                                                                                                       >  1:1456499/1‑239 (MQ=255)
     ttATTCCCGTTATTGTTTTCTCGGCCCATGT‑AATTTTTGGCAAACAATATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑Ca‑ttt                                                                                                                                                                                                                   <  1:156437/239‑1 (MQ=255)
       aTTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGATCAGAA‑AAAAGCAA‑CAGGAA‑Ca‑tttt                                                                                                                                                                                                                  >  2:1401638/1‑239 (MQ=255)
        ttCCTGTTATTGTTTTCTCTACCCACATGAATTATTGAA‑AAGACAAATTCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑Ca‑tttta‑t                                                                                                                                                                                                               <  2:1456499/239‑1 (MQ=255)
            cGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCTC‑A‑AAAAAAGA‑CAAAAA‑Ca‑tatta‑ttttt                                                                                                                                                                                                           >  2:156437/1‑238 (MQ=255)
             ggTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCA‑A‑AAAAAAGA‑AAAGCA‑Ca‑tttta‑ttttt                                                                                                                                                                                                           >  1:767590/1‑237 (MQ=255)
                  tgttttCTCTCACC‑CCTGAATTTATGACAAACCAGATTTCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  2:115148/236‑1 (MQ=255)
                                  cTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAAAAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCG‑A‑AAAAAAGA‑CATGTA‑CA‑TTTTT‑ATTTTCCTCATTTG‑gttttatattcgg                                                                                                                                                                                    >  2:195375/1‑230 (MQ=255)
                                            ggC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAACGC‑GATGCA‑Ca‑attta‑tttttc                                                                                                                                                                                                          >  1:1208622/1‑206 (MQ=255)
                                                               ccATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAG‑C‑AAAAACGA‑CATGCA‑CA‑TTTTA‑TTTTTCCTCCTCTT‑TTTTTATAATC‑GAAACATG‑AAAATT‑AAAAGA‑GGGAaaataa                                                                                                                                                    >  2:258560/1‑239 (MQ=255)
                                                                       aTTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCG‑C‑AAAAAAGA‑CAAGCA‑CA‑TTTTA‑TTTTTTCTCCTCTG‑TTTTTTGATAG‑GCAAAATG‑AAAATT‑AACAGAGGGAAAAAAAAATGGaaa                                                                                                                                             >  2:1540910/1‑239 (MQ=255)
                                                                             gACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTgg                                                                                                                                      <  1:149868/239‑1 (MQ=255)
                                                                                  cGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTAtt                                                                                                                                 <  1:742825/239‑1 (MQ=255)
                                                                                  cGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCG‑A‑AAAAACAA‑CATTCACCA‑TTTTT‑TTTTCCC‑CCTCTG‑TTTTTAGAAGC‑GGAACAAGCAAATAA‑AAAGGA‑‑GAAAAAAAAAAAGGAAAGATTgggttat                                                                                                                                 >  1:380882/1‑234 (MQ=255)
                                                                                              taataaACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATg                                                                                                                                           <  1:838424/217‑1 (MQ=255)
                                                                                                    aCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  1:170342/158‑1 (MQ=255)
                                                                                                        tACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGG‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGaaaa                                                                                                           <  1:1711601/239‑1 (MQ=255)
                                                                                                             cTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCG‑A‑AAAAACGA‑CATGAA‑CA‑TTTTA‑TTTTTTCTCCTTTT‑TTTTTTGAATA‑GAAACATG‑AAATTT‑AACCGT‑GGGAAAAAAAAATGGAAAAATTTGCTATTTTTTAGAAAATTATTCAGaaaaaaata                                                                                                      >  2:1730243/1‑234 (MQ=255)
                                                                                                                gCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                                                                                   <  1:592879/239‑1 (MQ=255)
                                                                                                                    ggTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  1:1553682/142‑1 (MQ=255)
                                                                                                                           ccGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  1:67754/135‑1 (MQ=255)
                                                                                                                              cagacagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGGCAG‑A‑AAAAAAGA‑AAAACA‑CA‑TTTTT‑TTTTTCCTCCTCTG‑ttttttt                                                                                                                                                                                          >  2:1553682/1‑139 (MQ=255)
                                                                                                                                          aTTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑aa                                                                                                                                                                   <  1:221445/150‑1 (MQ=255)
                                                                                                                                             aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg                                                                      <  2:1120488/239‑1 (MQ=255)
                                                                                                                                             aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg                                                                      <  1:440397/239‑1 (MQ=255)
                                                                                                                                              tCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCG‑A‑AAAAACGA‑CAAGCA‑CA‑TTTTA‑TTTTTCCCTACTTT‑TTTTTAGAAGC‑GGAAAATG‑AAATTT‑AACGGA‑GGAAAAAAAAAAGGGAATGATTGGCTATTTTGTAGAAAATGACTCAGAAAAAAATAACCAACTACTTGAGTCTACTGAAAAAACtttta                                                                     >  1:18217/1‑237 (MQ=255)
                                                                                                                                                   aaaTGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt                                                                    <  1:1540910/235‑1 (MQ=255)
                                                                                                                                                    agtGGCTCGGGTAGTGGATGGTGTTATAGCTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTACAG‑A‑AAAAGGGA‑CATGCC‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTGTAAGATGG‑GAAACATG‑GAATTC‑AACGGA‑GGAAAAATGAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGAATAGCCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGaga                                                               <  2:1042699/237‑3 (MQ=255)
                                                                                                                                                    aaTGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  1:491819/110‑1 (MQ=255)
                                                                                                                                                    aaTGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑GACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGata                                                               <  1:1401638/239‑1 (MQ=255)
                                                                                                                                                              gTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑aa                                                                                                                                                                   <  1:1071013/130‑1 (MQ=255)
                                                                                                                                                                aGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGaca                                                   <  1:195375/239‑1 (MQ=255)
                                                                                                                                                                aGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGaca                                                   <  1:620632/239‑1 (MQ=255)
                                                                                                                                                                  tGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAACGA‑CATGCC‑CA‑TTTTATTTTTCCCCCTTCT‑‑TTTTAAGATGT‑GCAACATC‑AAAATT‑CATGGA‑GGAAAAAAAAAAGGGAAAGTATTGCTATTTTTCAAAAAATTACTCAGAAAAGAATAAACAAACTCTTAAGACTACTTAAAAACCCTTGATGGATAATATACATTacaa                                                  >  1:228818/1‑237 (MQ=255)
                                                                                                                                                                    gATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg                                                                      <  1:758903/216‑1 (MQ=255)
                                                                                                                                                                      tGGGGTTATAACTTTGTTATACAAAAGTAAATAATAAAAATTTCTCGAGGCGGGT‑GAG‑ACAAAAAAGATAATTAA‑AA‑TTTTT‑TTTTTCCCCTTTTT‑TTTTAA‑AAAA‑GAAACACA‑AAAAAT‑AACGGA‑GGGAAAAAAAAATGGAGAGATTGGCTATTTTGTAAAAATTGACTCACAAAAAAATAAACAAATGCGTTAGGTTCTTCAAAAAACTTTTATGGAAAAAATAAATAAAACGAttt                                             >  2:1508439/1‑239 (MQ=255)
                                                                                                                                                                         tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCAt                                                                                                                                                                                                     <  1:804023/89‑1 (MQ=255)
                                                                                                                                                                         tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGa                                                                                                              <  1:50723/171‑1 (MQ=255)
                                                                                                                                                                         tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                                                                                                   <  1:1417989/182‑1 (MQ=255)
                                                                                                                                                                         tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt                                                                    <  1:715924/213‑1 (MQ=255)
                                                                                                                                                                           ttATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt                                                                    <  1:382369/211‑1 (MQ=255)
                                                                                                                                                                           ttATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGac                                                    <  1:873532/227‑1 (MQ=255)
                                                                                                                                                                              taACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAG‑A‑AAAAAAGA‑CAAGCA‑CA‑TTTTT‑TTTTTCCTCCTCTG‑GTTTTAGAAGG‑GAAAAATG‑AAAATT‑AAAGGA‑GGAAAAAAAAAAGGGGATGATTGGGTATTTTGCAGAAAATTAATCAGAAAAAAATAAACAAAAGCTTGAGGTTACTGAAAAAACTTTTATGGGAAATATAAAAGAAACGCCTTCAGGAtt                                      >  1:718479/1‑238 (MQ=255)
                                                                                                                                                                                   ttGTTATACAATAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAACGG‑CATGCA‑CA‑ATTTT‑TTTTTCCCCATCTT‑TTTTTAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAAAAAATTGGAATGATTTGCTATTTTGCTGAAATTGACTCAGAAAAAATTAACCAACTGCTTTAGTCTACTGAAAAACCCTTTATGGATAATATACATTAAACGCTTTCAGGATTACGCCg                                >  1:1729862/1‑239 (MQ=255)
                                                                                                                                                                                   ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCG‑A‑AAAAACGA‑CAAGCA‑AA‑ATTTT‑TTTTTCCTCCTCTG‑TTTTTAAAAGG‑GAAAAAAG‑AAAATT‑AACGGG‑GGGAAAAAAAATGGGGAAGATTGTCCTTTTTTTAGAAAATTAATCAGAAAAAATTAAACAACATCTTGTGGTTACTGAAAAAACTTTTTTGGGTAAAATAAATTAAACCCTTTTTGGATTAAGcc                                 >  1:685077/1‑238 (MQ=255)
                                                                                                                                                                                   ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCG‑A‑AAAAAAGA‑CAAGAA‑AA‑TTTTA‑TTTTTTCTTCTCTT‑TTTTTAAATGC‑GGAAAATGAAAATTA‑AACGGG‑GGAAAAA‑AAATAGGGAAGATTTGCTCTATTTCTGAAATTTATCCAAAAAAAAATAAACCACTGCTTTTGTGTACCGAAAAAAACTTTTTGGATAAtata                                                          >  2:715924/1‑213 (MQ=255)
                                                                                                                                                                                   ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCG‑A‑AAAAAAGA‑AATGCA‑CA‑TTTTT‑TTTTTCCTCCTCTG‑TTTTTTAATGC‑GAAAAAAT‑AAAATT‑AACGGG‑GGGAAAATAAATTGGAATGATTTGCTATTTTTCTGAAATTTACTCACAAAAAAATAaacaacatctttt                                                                                         >  2:1417989/1‑175 (MQ=255)
                                                                                                                                                                                   ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCG‑A‑AAAAAAGA‑AAAACA‑CA‑TTTTT‑TTTTTTCTCCTCTG‑tttttaa                                                                                                                                                                                          >  2:804023/1‑86 (MQ=255)
                                                                                                                                                                                   ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCg                                <  1:1419490/239‑1 (MQ=255)
                                                                                                                                                                                    tGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTCCCCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGa                               <  1:1813758/239‑1 (MQ=255)
                                                                                                                                                                                     gTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGAc                              <  1:1050354/239‑1 (MQ=255)
                                                                                                                                                                                     gTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAG‑A‑AAAAAAGA‑CAAAAA‑CA‑ATTTA‑TTTTTTCTCATTTT‑TTTTTAGATGT‑GAAAAAAG‑AAATTT‑AAAGGA‑GGGAAAAAAAAAGGGTAAGATTGGCTCTTTTTTAAAAAATGACTCAGAAAAAAATAAAAAAAATCTTTAGTCTTCTTAAAAAACCTTTATTGataaaaaa                                                          >  2:382369/1‑207 (MQ=255)
                                                                                                                                                                                      ttATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGt                                                                                       <  2:1200677/181‑1 (MQ=255)
                                                                                                                                                                                      ttATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTg                                                                      <  2:1106355/198‑1 (MQ=255)
                                                                                                                                                                                         taCAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGa                          <  2:1729862/239‑1 (MQ=255)
                                                                                                                                                                                         taCAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGCCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGata                                                               <  1:1796202/202‑1 (MQ=255)
                                                                                                                                                                                            aacaGTAAATAATAAAAATGTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGac                                                    <  2:1215340/210‑1 (MQ=255)
                                                                                                                                                                                              caGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt                                                                    <  2:506457/192‑1 (MQ=255)
                                                                                                                                                                                                gTAAATAATAAAAATTTCTCGAGGCGGGTGCAT‑A‑AAAAAAGA‑AAAGCA‑CC‑ATTTA‑TTTTTCCCCATCTG‑TTTTTAGATGCGGAAAAATA‑AAATTC‑‑ACCGA‑GGAAAAATAAATTGGAATTATTTGGTATTTTTTAGAAAATTACTCAGAAAAAATTAACCAACAGCTTTAGGCTTCTGATAAAACTTTTTTGGataata                                                            >  1:1106355/1‑198 (MQ=255)
                                                                                                                                                                                                gTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAACGA‑CAAGGA‑CA‑TTTTT‑TTTTTCCCCCTCTT‑TTTTTAAAATC‑GAAAAATG‑AAATTT‑AACAGA‑GGAAAAATAAAATGGGATGATTGGCCTTTTTTCAGAAAATTAATCAGAAAAAAATAAACAACAGCTTTAGTCTTCTTaaaa                                                                             >  1:1200677/1‑181 (MQ=255)
                                                                                                                                                                                                gTAAATAATAAAAATTTCTCGAGGCGGGGCCCG‑A‑AAAAAAGA‑CAAGCA‑CA‑ATTTT‑TTTTTTCCCCTCTGTTTTTAAAAGGG‑GAAAAAGA‑AAATTA‑AAAGAG‑GGAAAAAAAAATGGGAGGAATTGGCTATTTT‑TAGAAAATGTATCAGAAAAAAATAACAAAAAGTCTGAGTTTTCTTAAAAAACTTTGTTGGAGAAAAAACATGAAACACTTTCTTGAGTATGCCGCATGCGTATTGAt                   >  2:717692/1‑239 (MQ=255)
                                                                                                                                                                                                 tAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATa                  <  2:1568626/239‑1 (MQ=255)
                                                                                                                                                                                                   aataatAAAAATTTCTCGAGGCGGGTTCCG‑A‑AAAAACGA‑AACGCA‑CATTTTTT‑TTTTTCCTC‑TCTC‑TTTTTTTAAGG‑GAAAAATG‑AAAATCTAACGAG‑GGAAAAAAAAATGGG‑ATGATTTGCTATTTTGTAGAAAATTACTCAGAAAAAAATAAACAAATGCCTGTGTGTTCTGAAAAAAACTTTATTGGTAATATAAAtaa                                                     >  2:1796202/1‑200 (MQ=255)
                                                                                                                                                                                                      aataaAAATTTCTCGAGGCGGGTCCAA‑A‑AAAAACGA‑CAAGGC‑CA‑TTTTT‑TTTTCCCCTCTCTT‑TTTTTAGATTG‑GGAAAATG‑AAAATC‑AACAGA‑GGAAAAATAAATAGGGATGATTTGCTTTTTTGCAGAAATTGATTCAGAAAAGATTAAACAACTGCTTGGGTCTTCTGAAAAAACATTTATTGGAAATATAACTGAAACGCCTTCac                                          >  1:1215340/1‑209 (MQ=255)
                                                                                                                                                                                                        taaAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAAAGA‑CATGCA‑CA‑TTTTT‑TTTTTCCTCATCTG‑TTTTTAGATGC‑GAAAAAAG‑AAAATT‑AAAGGA‑GGAAAAAAAAATGGGGATGATTGGCTATTTTTCAGAAAATTAATCAGAAAAAAATAAACAAATGCTTTAGTCTAATGAAAAAACTTTTATGGGTAAtata                                                          >  1:506457/1‑192 (MQ=255)
                                                                                                                                                                                                            aaTTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGAt       <  2:1620754/239‑1 (MQ=255)
                                                                                                                                                                                                                 ctcGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGAtttttt  <  1:322537/239‑1 (MQ=255)
                                                                                                                                                                                                                                       aGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCttt                                             <  1:1447075/176‑1 (MQ=255)
                                                                                                                                                                                                                                       aGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCttt                                             >  2:1447075/1‑176 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                  
AGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGC‑AACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAG‑A‑AAAAGCGA‑CATGCA‑CA‑TTTTA‑TTTTCCCTCATCTG‑TTTTAAGATGC‑GAAACATG‑AAATTC‑AACGGA‑GGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTT  >  NC_000913/2386633‑2387079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑