| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,760,384 | 0 | A | C | 30.3% | 120.3 / 19.8 | 76 | V289G (GTG→GGG) | selA | selenocysteine synthase |
| Reads supporting (aligned to +/- strand): ref base A (45/8); new base C (2/21); total (47/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTC > NC_000913/3760147‑3760605 | gCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCAc < 2:1098495/239‑1 (MQ=255) gATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCCAACAACTTGTCGCCGGGGAAACTCAcccg > 1:1505722/1‑235 (MQ=255) ccTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGCTCATCTCTTTTTTTCCAACAATAAATCC‑TGCCTTCGGGCCCCCCAAAAACTTTTCGCCCGAGAAAATCACCAGaacg > 2:336733/1‑227 (MQ=255) tgcgctgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTTCGGCCCGCCTAAAAAATTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCaa > 1:470117/1‑239 (MQ=255) tgcgctgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGGGAAACTCACCAGACTGAcgccccccccca > 1:1231002/1‑235 (MQ=255) tgcgctgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCaa > 1:763955/1‑239 (MQ=255) cgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGCTCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATTAACt > 1:248528/1‑238 (MQ=255) cgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTTCCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACCCACCAGACTGACGCCCGCCGCAATCAAcc > 2:621415/1‑237 (MQ=255) cgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACCGACCCCCGCCGCAATCAACt > 1:1775088/1‑238 (MQ=255) taaCTCGGGGCTTCAGGGTGTAAAGAGAGAGGAAACGTGGATGCCCGGCGCGGGAGTTTCGTTTCACCCGCGCATATTCCCGCCGAGAGCGGTTGGCTTG‑CCGGGGGGGCAATCATCTTTTTTTTCCAAACAATAATCCC‑GGCCGGGGCCGCGCCAAACACTTTGTCGCGGGAAAACCCCCCCAGACTGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 2:1774089/237‑1 (MQ=255) ccACTCCGACGTTCGGGGTGTAAAAAAAGCCGAAGCGTGGCCTCCGGCGCGCGGGGGGTCTTTTTCCCCGCGCGTAGTGCACCCTTAAGCGGGTGGCTGG‑GCGGGCGGGCAACCTTCTCTTTTTTACAAACAATATTGCC‑GCCCGGCGGCCCGCCAAACATCTTGTCGGCGGAAAACCCCCCCAGCCTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 2:248528/238‑1 (MQ=255) agCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAAAACTTCC‑TGCCTGCGGCCCGCCCAACAACCTGTCGCCCGAGAAAACCACCAGACCGCGGCCCGCCGCAATCAACCCCCCCCGGCCGCGCTCCTTCGGGAAACCGTGCTGGCtca > 2:1361053/1‑237 (MQ=255) cTTCAGGGTGAAAAAAAAGACGCAGCGTGGCTTCCGGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCGGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTGGTCGCGGGAAAACCTCCCCAGACGGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCa < 2:661324/222‑1 (MQ=255) taaataaaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGGTCATCTCTTTTTTTCCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAAATCACCAGACCGACCCCCGCCCCAATCAACTCCCGCGGGCTTGGCCCTTTTGGGAAACCCTCCTGGCTAAAATCCACCAgtc > 2:157296/1‑237 (MQ=255) taaataaaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTg > 1:661324/1‑222 (MQ=255) aaaGCCGCAACGTGGCTTCCAGCGCCGCGGGGGTCATTTTACCCGCGCGTAATGCACGCTTCAGGGGGTGGCTTT‑GCGGGCGGGCGATCATCTCTTTTTTCCCAAAAATAATCCC‑TCCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCCCCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCa < 1:1613221/239‑1 (MQ=255) aaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGGTCATACCTTTTTTAACAACAATAATTCC‑TGCCTGCGGCCCCCCCAACCACCTTTTGCAGGAGAAACTCCCCACACTGCCACCCGCCGCAATCAACTCCt > 1:216216/1‑185 (MQ=255) gACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCCATCAACTCCTGCGGCATTGGCCCTTTCGGCCAACCGTACTGGCTAAGATCGACCAGCGAGcc > 1:1452460/1‑235 (MQ=255) cAACGTGGCTTCCAGCGCCGCGAGGGGCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCTTCTCTTTTTTTCCAACAATAATTCC‑TGCCTGCGGCCCGCCCAAAAACCTGTCGCCCGAGAAACTCACCaca > 2:613302/1‑152 (MQ=255) cTTCCCGCGCCGAGGGGGTCATTTGCTCCGAGGGTTAAGCACCATGAGGCGTGTGGCTTT‑GGAGGCGGGCATCCCTCTTTTTTTAACAAAAAATATTCCC‑CGCCGGCGGCCCGCATAACAACTTGTCGCGGGAAAAACCCACCAGACGACCCCCCGCCGCAATCAACTCCTGCGGCATGGGCTCTTTCGGCAAACCGTACTGGCAAAGATCGCCCAGCGAGCCACCGCCTAAATCAGt < 2:402997/238‑1 (MQ=255) ccAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTaaaa > 1:1608043/1‑230 (MQ=255) ccgcGAGGGTCATTTTCTCCGCGTGTAAGCCCCCCTTCGGCGGGTGGCTTT‑GCGGGCGGCCGATCATCTTTTTTTTACCAAAAATAATCCC‑TCCCGGCGGCCCGCCTAACAACTTGCCGCCGGAAAAACTCACCAGCTTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGa < 1:1241039/239‑1 (MQ=255) cgcgTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCCAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCCGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTAc > 1:191007/1‑214 (MQ=255) gTAATGCGCGTTTCAGGGGGTGGCTTT‑GGAGGGGGACAATCATCTTTTTTTTCCAAAAAAAACTCCC‑TGCCAGGGGCCCGCCTAACATCTTGTCGCCGGAAAAACCCCCCAGCCGGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 2:1494922/166‑1 (MQ=255) tGCCCGCTACAGGGGGTGGTTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAAAAAAAATTCC‑TGCCGGGGGCCCGCCAAACAACTTGGCGCGGGAGAAACCCCCCAGACTGACGCCCGCCGCAATCAAc < 1:1334220/130‑1 (MQ=255) cGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCCACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCcgcg > 1:1236022/1‑133 (MQ=255) cGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCCCCCGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCCCTTTCGGCAAACCGTACTGGCCAAAATCGACCAGCGAGCCACTCCCTAAATCAGTCACTACGGGAACATCCCGCTCCTTTCCGAGCCcca > 2:580337/1‑232 (MQ=255) cTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACCATAATTCC‑TGCCTGCGGCCCGCGTAACAACTTGTCCCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGCACTGGCTaaaa > 1:1788448/1‑164 (MQ=255) cTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCCAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACCCCTGCGGCATTGGCCCTTTCGGCCAACCGTACCGGCTAAGa > 1:1494922/1‑166 (MQ=255) ttCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGGCCGCCTAACAACTTTTTGCCGGGGAAACTCACCCGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAAATCGACCAGCGAGCCCCCGCCTAAATCAGTCACCACGGGAAAATCCCGCTCTTTGCCGCGCGccacccagtccc > 2:507052/1‑231 (MQ=255) ttCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTcc > 1:590481/1‑237 (MQ=255) tCAGCGGGGGGCTTTGGCGGGGGGGCAATATTCTTTTTTTACCCAACAATATCCCC‑TCCCGGCGCCCCGCCAAACATCTTGCCGCGGGAAAACCTCCCCAGACTGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAAc < 2:1739540/206‑1 (MQ=255) aGCGGGTGGCTTT‑GCAGGCGGGGGATCATTTCTTTTTTACCAACAAAAAATCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGGGAAAATCACCAGACTGACGCCCGCCCCCAACAAATCCTGCGGCATTGGCTCTTTTGGCAAACCGTACTGGCTAAGATCGACCAACGAGCCCCCGCCTCAATCAACCACACTGGGAAAATCCCGATCTTTGTCCAGCGCCCCCACTTTCGcct > 2:422147/1‑236 (MQ=255) aGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTTCCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCTCCGGAGAAACTCACCAGACTGACCCCCGCCGCCATCAACTCCTGCgtcc > 2:1334220/1‑127 (MQ=255) aGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAAAAATAATTCC‑TGCCTTCGGCCCCCCCAACAACTTGTTGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGTCATTGGCTCTTTCGGCAAACCGGACTGGCTAAAATCGACCAGCGAGTCCCTCGCCAAATCCGTCACTACCGGAAAATCCCGCTCTTTTCCGAGCGCCACCCGTTgcgccc > 2:1376591/1‑236 (MQ=255) ggTGCCTTG‑GCAGGCGGGCGTTCATCTTTTTTTTCCAAACAAAAATCCC‑TGCCTGCGGCCCGCCTAACAACTTGCCGCCGGAGAAACTCCCCAGACGGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCa < 1:624759/173‑1 (MQ=255) tGGTTTT‑GCAGGGGGGCGATCATCTTTTTTTCACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAAAAACCCCCCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTa < 1:507052/238‑1 (MQ=255) ggCTTT‑GCAGGTGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGctct > 1:1739540/1‑206 (MQ=255) ggCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGGACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTAAGGGAAAATCCAGCTCTTTGCCCAGCGCCACCAGTTCCGc > 1:83186/1‑229 (MQ=255) cAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCCGTTCCCCCTCATCTATCGCTTTgg > 1:1584227/1‑239 (MQ=255) cAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTTTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCCTACTGTCTAAGATCGACCAGCGAGCCCCTGGCTAAAt > 2:624759/1‑173 (MQ=255) gcgggccACCATCTCTTTTACAAAAACAATTACCCC‑GGCGTGCCGCCCGCCAAACATCTTGCCCGCGGAAAACCCCCCCAGCCAGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTg < 2:1452460/238‑1 (MQ=255) gggccATCATCTCTTTTTGACCAAAAATAATCCC‑GGCCGGCGGCCCGCCTAACAATTTGCCCCCGGAGAAACCCACCAGCCTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGaa < 1:1361053/238‑1 (MQ=255) gcgATCATCTTTTTTTCCCCAAAAAAAATCCC‑CGCCGGCGCCCCCCCAACCATCTTGTCCCAGGAAAAACCCCCCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCa < 2:1738377/156‑1 (MQ=255) gATCATCTTTTTTTCCCCAAAAAAACTTCC‑TGCCGGCGCCCCGCCTAACACCTTGTCGCCGGAGAAACTCCCCAGACTGCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt < 1:157296/239‑1 (MQ=255) atcatcTTTTTTACACAAACAAATACCCC‑CGCATGCGCCCCGCCTAAAACTTTGCCCCGGGAAAACCCCCCCAGACGGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt < 2:1775088/238‑1 (MQ=255) ctTTTTTACCATCAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAAt > 1:1738377/1‑156 (MQ=255) ctTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGa > 1:603229/1‑170 (MQ=255) ttttttCCCCACAAAAATCCCGCGCCCGCCGCCCGCCAAACAATTTGCCGCGGGAGAACCCCCCCACCCGGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTg < 2:763955/239‑1 (MQ=255) tttttcACCAACAAAAATCCC‑GGCCGGGGCCCCGCCTAACAACTTGTCGCCGGAAAACCTCCCAAGCCGGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGt < 1:580337/239‑1 (MQ=255) aaaaaaaaatCCC‑CGCCGGCGGCCCGCCTAACACCTTGCCCCCGGAAAACCCCACCGGACTGCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTg < 1:422147/232‑1 (MQ=255) acaaTAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa > 2:538955/1‑110 (MQ=255) acaaTAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 1:538955/110‑1 (MQ=255) acaaTAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGt > 1:90376/1‑239 (MQ=255) aataatCCC‑TGCCTGCGCCCCCCCTAACAACTTGTCGCCGGAGAACCCCCCCAGCCTGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 2:432735/108‑1 (MQ=255) aatCCC‑TGCCTGCGGCCCGCCTAACAACTTGCCGCCGGAAAACCTCCCCAGACTGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTa < 1:621415/239‑1 (MQ=255) gcctgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTg > 2:951117/1‑71 (MQ=255) gcctgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGa > 1:432735/1‑108 (MQ=255) gcctgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTTCCTAAATCAGTCACTACGGTAACATCCAGCTATTTTCCGAGTGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGTACCCCTGCATGCAGTAGTTACTCGTATGTACTTtca > 2:401892/1‑238 (MQ=255) gcctgcGGCCCGCCAAACAACTTGTCGCCGGAGAAACTCCCCAGACTGACGCCCGCCGCAATCAACTCCTg < 1:951117/71‑1 (MQ=255) cctgcGCCCCGCCAAACACCTTGCCGCGGGAAAACCTCCCCAGACGGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGc < 2:1561575/89‑1 (MQ=255) cggcgcCCCCCCAAAAAACTTTCCGCGGGAAAACCCCCCCAGCCTGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCaaa < 2:380945/89‑1 (MQ=255) tgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCCCCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGt < 1:1525784/134‑1 (MQ=255) tgcGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGt > 2:1525784/1‑134 (MQ=255) cGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa < 1:1157951/93‑1 (MQ=255) cGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTa > 2:1157951/1‑93 (MQ=255) cGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTTTCGCTTTGGTg > 1:9625/1‑196 (MQ=255) cGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACa > 2:777811/1‑239 (MQ=255) gCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACt > 1:1561575/1‑89 (MQ=255) ccTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGc > 1:380945/1‑91 (MQ=255) cTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTa > 2:1437472/1‑239 (MQ=255) tGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGt > 2:436301/1‑155 (MQ=255) tGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGt < 1:436301/155‑1 (MQ=255) tGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTa > 1:158395/1‑168 (MQ=255) gTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTttcattc > 2:72217/1‑238 (MQ=255) cGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATg > 1:645736/1‑202 (MQ=255) | GCCTGGATTTGAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTT‑GCAGGCGGGCGATCATCTCTTTTTTACCAACAATAATTCC‑TGCCTGCGGCCCGCCTAACAACTTGTCGCCGGAGAAACTCACCAGACTGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTCGGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGGAACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTC > NC_000913/3760147‑3760605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |