Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,862,664	0	C	G	37.0%	23.0 / 13.2	50	pseudogene (940/1617 nt)	glvC	pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component
Reads supporting (aligned to +/- strand):  ref base C (21/8);  new base G (3/14);  total (28/22)
Fisher's exact test for biased strand distribution p-value = 5.80e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.93e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGAT  >  NC_000913/3862435‑3862901                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTTCGG‑GAATCa                                                                                                                                                                                                                                               >  1:1115105/1‑238 (MQ=255)                      gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAGATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑CTAA‑AGGTGTGG‑GGATACTCCAGCCCCCCC‑Ctttttcac                                                                                                                                                                                                                         >  2:729119/1‑234 (MQ=255)                       cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAA‑AGGTTCGG‑GGATCAGCCAACCCCCCA‑CCTTTAtccca                                                                                                                                                                                                                       >  2:194375/1‑237 (MQ=255)                                                    tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑TCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGTGG‑GAAACAGCCAGCCCGCCA‑CTTTTATCCGCCTTTCCGGTGCGGGA‑GAGAAGGATAT‑Cg                                                                                                                                                                                         >  1:1482642/1‑238 (MQ=255)                                                      cGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAAGGGTTGGGG‑GAATCGGAAACCCCCCCC‑CTTTT‑CCCCATTTTTCGGTGGGGGC‑GGGAAGtgaaacgcca                                                                                                                                                                                       >  2:1510292/1‑230 (MQ=255)                                                                   tCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑AGGTGTGG‑GAATCAGCAAAACCGCCA‑CCTTTATCCGATTTTCCCGTGCGGCA‑GTGAAGTACAA‑CGCTAaaaaaaatcccc                                                                                                                                                                          >  1:1497863/1‑232 (MQ=255)                                                                                                  caccaAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAA‑AGGTGCGG‑GGAACAGCCAGCCCCCCA‑CCTTTTCCCCATTTTTCGGTGCGGCA‑GGGAAGGACAA‑CGCTAAAAAAAAG‑CCCACGGCACCCAAGAATTTTTAG‑TTTACGTGCAgg                                                                                                                                        >  1:1079553/1‑239 (MQ=255)                                                                                                            aTACATT‑CGGTCGGACATGGGGCCCCCCAGCACGGCGTGTCCCGCAACCAACAACGGAAAAATAAACA‑GAAAGTAAATTCCCAGGGTTTCGTTAATCCCCGCCAGAAGGGC‑GG‑TGAA‑GTTGGGGG‑GAAACAGAAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTg                                                                                                                                                                                                             <  1:1037041/164‑1 (MQ=255)                                                                                                             tACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAATGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTTAA‑GGTTG‑GG‑GGATTAGCAAACCCCCCC‑CTTTTTCCCCCTTTTTCCGTGCGGCC‑GGGGAGTACCT‑CGCTAAAAAAATT‑cc                                                                                                                                                                           >  1:1661207/1‑194 (MQ=255)                                                                                                              aCATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAACCCCCCC‑CTTTTACCCGATTTTTCCGTGCGGCA‑GGGAATGACAT‑CGCCAAAAAAATG‑CCCACGGCCCCAAAGATTTTTTAG‑TTTCCATGCCAGGC‑AAAACCGCCt                                                                                                                           >  1:1311332/1‑239 (MQ=255)                                                                                                                  tgaggggcaaCAGTGGGGCCCCCGGCACGGCGTCAACCAAAAACAGAAACGGAGAAAAAAAAGGGAAGGAAAATG‑CGGGGGGTTGGGTAATCCCCCCCAGCGGGGT‑GT‑TTAG‑GGGTGGGG‑GAATAAAAAACCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAAc                                                                                                                                <  2:1040287/222‑1 (MQ=255)                                                                                                                    cGGTC‑GACTTTGGGGCCCCCAGCCCGGCGTGTCCCCCAAACAGCAACGGTAAAATGAACAGGAAGGTAAATC‑CCGGCGGTTCGGTATTCCCCCCCAGCAGGGC‑GT‑TTAA‑GGTTGGGG‑AAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTg                                                                                                                                                                                                    <  1:853561/164‑1 (MQ=255)                                                                                                                       tC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAA‑GGGTTCGG‑GGAACAAGAAGCCCCCCACCTTTTACCGCATTTTCC‑GTGCGGCA‑GTGAAGAAAAC‑TCCTCAAAAAAAA‑ACCACAGCCCCCAAAAATTTTTTG‑TTTACGTGTAGGGG‑GAAACAGCCTTCCCGGgac                                                                                                                  >  2:199024/1‑239 (MQ=255)                                                                                                                          gACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGATTAA‑GGTGGGGG‑GATTTAACAACCCCCCCC‑CTTTTCCCCG‑TTTTCTGGTTCGGGACGGGAAAAACA‑‑CGCTCAAGAAAAA‑CCCACCGGACCAAAGAATTTTGTG‑TTACCTTGCAGGGC‑AAAAACGCCCTCCGTGaacaa                                                                                                                >  2:420251/1‑239 (MQ=255)                                                                                                                          gACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGCGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGGTTCGG‑GAATCAGCAAACCCGCCC‑CCTTTACCCCATTTTTCGGGGCGGGC‑GGGAAGGACAT‑CGCTAAAAAAAAG‑CCCACGGGCCCAAAAACTTTTGAGTTTACCGGCAAGGGC‑AAACCCCCCTCCCGGGacaa                                                                                                                 >  2:914162/1‑236 (MQ=255)                                                                                                                           aCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑CTAA‑AGCTTCGG‑GGATCCGCAAACCCCCCC‑CCTTTTCCCCCTTTTTCGGTGGGGCA‑GTGGAGGACATCCCCCAAAACAATC‑CCCCGGCCACCAAAACTTTTTG‑G‑TTTCCGCGCCCGGCAAAAACCCCATTCCGGGagaac                                                                                                                >  2:405917/1‑235 (MQ=255)                                                                                                                             aTTGAGGCCGCCAGCACGGCTGTTACCCCAAACAGAAGCGATAAAATGAACAGAAAGGAAAATT‑CCAGCGGTGCGGTAATCCCCACCAGCAGGGG‑GG‑TTAG‑GGTTGGGG‑AAATCACAAGGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCa                                                                                                                                                                         <  1:922556/181‑1 (MQ=255)                                                                                                                               tGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAA‑GGGTGGGG‑GGATCAGCAAAACCGCCA‑CCTTTAACCCATTTTCCGGGGCGGGA‑GGGAAGGACAA‑Cg                                                                                                                                                                                         >  2:853561/1‑164 (MQ=255)                                                                                                                                          gcccGGGGTGTCCCGCAAACACAACCGGTAAAAGAAACGGGAAGGAAAATT‑CCAGCGGTTCGGTATTCCCCACCAGAAGGGG‑GG‑TTAA‑GGTGGGGG‑GAACCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACg                                                                                                                                                                       <  1:1714098/167‑1 (MQ=255)                                                                                                                                          gCACGGCGTGTCCCGCAAACAGAAGCGGTAAAATGAAGAGGAAGGTAAATT‑CCGGCGGTTCGTTAATCCCCACCAGCATGGC‑GT‑TAAA‑GGTTGGGG‑GAATAAGAAGGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCa                                                                                                                                                                                                        <  1:1206983/140‑1 (MQ=255)                                                                                                                                               gcgaggaCCGCAACAAGAAAGGGAGAAGTGACGGGGAGGGTAACTG‑CCAGCGGTGGGTTACCCCCCACCA‑CGTGGG‑GG‑GTAA‑GGGTGGGGAGAATACGCAGCCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGgcg‑c                                                                                          <  2:87298/232‑1 (MQ=255)                                                                                                                                               gCGGGTACCGAAAGCAGCAACGGGAAAATGAACAGGAAGGTAAATT‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGC‑GG‑TTAA‑GGTTGCGG‑AAACCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGgcg‑c                                                                                          <  1:194375/238‑1 (MQ=255)                                                                                                                                                  tgtcccaaaaaCAGCAAGGTATAAATGAAAGGGAAGGAAACTC‑CCGGCGGTGCGAAAACCCCCCCCAGGGGGGG‑GG‑TTAA‑GGTGGGGA‑AAAGCAGAAACCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGAttt                                                                                                                                                          <  2:1173872/167‑1 (MQ=255)                                                                                                                                                    tACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGCGGG‑TTAG‑GGTTCCGG‑G‑AGAAGCGAACCCGCCC‑CTTTTTCCCCGGTTTTCGGGGGGGGG‑GGGAAGTACa                                                                                                                                                                                             >  2:1206983/1‑140 (MQ=255)                                                                                                                                                       cGCAAACAGCAACGGTGAAATGAACAGGAGGGTAATTC‑CCGGCGGTTGGGAAATCCCCCCCAGGAGGGC‑GG‑TTAA‑GGTGGGGG‑GAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCAGCA‑GTGAAGTa                                                                                                                                                                                               <  1:1725320/135‑1 (MQ=255)                                                                                                                                                            aCAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GGATCAGCAAGCCCGCCA‑CCTTTACCCGGTTTTCCGGGGGGGCA‑GGGAAGGACAT‑CGCTTAAGAAAAG‑CCCACGGCACCAAAGATTTTTGAG‑TTAcc                                                                                                                                               >  1:1173872/1‑175 (MQ=255)                                                                                                                                                              aGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑CTAA‑AGGTGCGG‑GGATCACCAAGCCCCCCA‑CTTTTTCCCCCTTTTCCGGGGCGGGG‑GGGGAAAACAC‑CACTCAAGAAATT‑CCCACGGCACCCAAGATTTTTTTG‑GTTCCCGGCCGGGC‑AAAACCGCCTTCCCGGGAAAACAACTTTCA‑CGGCTCCGCG‑CCCCAACCGAAatctc                                                                           >  2:474346/1‑237 (MQ=255)                                                                                                                                                                 aaCGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑GTAA‑GGGTGCGG‑GGATCAGCAAACCCGCCC‑CTTTTACCCCATTTTTCGGTGCGGCC‑GTGGAGGACAA‑CGCCaaa                                                                                                                                                                                    >  2:1725320/1‑135 (MQ=255)                                                                                                                                                                        aaaTGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GGATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGGGCGGCA‑GTGAAGTACAT‑CGCTAAAAAAATG‑CCCCCCGCCCCAAAGATTTTTTAG‑GTAACCTGCAGGGC‑AAAAACGCCTTCCGGGAACAACGA‑TTTCCGCCGCGCCGCGCCCCAAACT‑AACCCTTTGACAtgctgc                                                                >  2:375515/1‑239 (MQ=255)                                                                                                                                                                        aaaTGAACAGAAAGATAAATT‑CCAGCGTTTGGGTAATCCCCCCCAGCTGGGG‑GT‑TTAG‑GGTTGGGG‑GAATCAGAAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAAct                                                                              <  1:579798/225‑1 (MQ=255)                                                                                                                                                                           taaaCAGGAGGTTAATTC‑CCAGCGGTTCGATAATCCCCCCCGGCAGGGC‑GG‑TTAG‑GTTTGCGG‑AAAGCACCAACCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTc                                                                                                <  1:1621581/203‑1 (MQ=255)                                                                                                                                                                             aagaGGAAGATAAATT‑CCAGCGGTTCGGTAATCCCCACCAGCGGGGG‑GG‑TTAA‑GGTTGGGG‑GAATCAGAAGGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTa                                                                                                                                                                                      <  1:500626/118‑1 (MQ=255)                                                                                                                                                                               cAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAGCCCGCCC‑CTTTTTCCCGATTTTCCGGTGCGGGA‑GGGAAGGACAT‑CGCTAAAAAAAAG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGGGCAGGGC‑AAAACCGCCTTTCGGGAACAAAGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGccccgg                                                         >  1:39613/1‑236 (MQ=255)                                                                                                                                                                                aggaggGTAAATC‑CCAGCGGTTCGGTAATCCCCACCGGCAGGGG‑GG‑TTAG‑GTTTGCGG‑GATTCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAg                                                          <  1:616204/237‑1 (MQ=255)                                                                                                                                                                                  gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GGAACAGCCAGCCCGCCA‑CTTTTACCCGATTTTTCGGGGCGGGA‑GTGAAGTACCT‑CGCTCAAAAAATG‑CCCACGGCCCCCAAGATTTTTTAG‑TTAACGTGCAGGGC‑AAAACCCCCTTCCCGGAACAACGA‑TTTTAGCGGCTCGGGG‑CCCCAACTGAAAACTGTCACAATCTGCGCCCAGcaca                                                      >  2:720463/1‑239 (MQ=255)                                                                                                                                                                                  gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGGTTCGG‑GGATCAGCAAGCCCGCCC‑CCTTTTCCCGATTTTCCGGTGCGGCA‑GGGAAGTACa                                                                                                                                                                                             >  1:809785/1‑110 (MQ=255)                                                                                                                                                                                   aaGGTAATTC‑CCGGCGGTTCGTTATTCCCCCCCAGCAGGGC‑GT‑TTAA‑GGTTGCGG‑AAATCAGAAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGAtgct                                                                  <  1:1309863/226‑1 (MQ=255)                                                                                                                                                                                    aGGTAAATT‑CCAGGGGTTGGGTAATCCCCCCCAGCATGGC‑GG‑TTAA‑GGTGGGGG‑AAACCGACAACCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACAt                                                     <  1:375515/238‑1 (MQ=255)                                                                                                                                                                                      ttAAATT‑CCGGCGGTTCGGAAATCCCCACCAGCAGGGG‑GG‑TTAG‑GGTGGCGG‑AAATCAGCAACCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTg                                                                                                                                                       <  2:269024/141‑1 (MQ=255)                                                                                                                                                                                      gTAATTC‑CCGGCGTTTCGGAAATCCCCCCCAGCATGGG‑GT‑TTAG‑GGTTGGGG‑GAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTg                                                                                  <  1:1473432/207‑1 (MQ=255)                                                                                                                                                                                      gTAAATC‑CCAGCGGTTCGGTAATCCCCCCCAGCATGGC‑GG‑TTAG‑GGTTGCGG‑GAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTg                                                                                  <  1:756854/207‑1 (MQ=255)                                                                                                                                                                                       tAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑AGTTGCGG‑GGATCAGGAAGCCCCCCA‑CCTTTACCCGATTTTTCGGTGCGGCA‑GTGAAGTACAA‑CCCCAAAAAAATG‑cc                                                                                                                                                                           >  2:500626/1‑121 (MQ=255)                                                                                                                                                                                           atcccggggtttCGATAATCCCCACCGGGTGGGC‑GG‑TAAA‑GGTTGCGG‑GAACCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATg                                              <  1:405917/229‑1 (MQ=255)                                                                                                                                                                                            t‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAGCCCCCCA‑CTTTTACCCCCTTTTTCGGTGGGGCA‑GCGAAGTACAC‑CGCTAAAGAAATGCCCCCCGCCCCCAAAGtttttta                                                                                                                                                       >  1:625085/1‑136 (MQ=255)                                                                                                                                                                                                 gCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTTCGG‑GAATCAGCAAGCCCCCCA‑CTTTTACCCCATTTTCCCGGGCGGCA‑GTGAAGTACAT‑CGCTAAAAAAATG‑CCCACGGCACCAAAGATTTTTTAG‑GTACCGTGCAGGGC‑AAAACCGCCCTCCGGGAACAACGA‑TTTTAACGGCTCCGCG‑CCCAAAATGAAATCTTTCAGATGCTGCGGCCCGGACATCTTAATgcccc                                          >  1:373476/1‑235 (MQ=255)                                                                                                                                                                                                 gCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAGCCCGCCC‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTg                                                                                                                                            >  1:269024/1‑142 (MQ=255)                                                                                                                                                                                                 gCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGGTGCGG‑GGATCAGCAAACCCCCCC‑CTTTTTCCCCATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCCAAAAAAAAG‑CCCACGGCACCAAAGATTTTTTAG‑TTACCGTGCAGGGC‑AAAACCGCCCTCCGGGAACAACGA‑TTTTAGCGGCTCGGCG‑CTCCAAACGAACACTTgta                                                                        >  2:756854/1‑205 (MQ=255)                                                                                                                                                                                                                       cATGGG‑GG‑TTAA‑GGTGGCGG‑AAATCAGCAGGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGaaca                                                                                                                 <  1:481104/146‑1 (MQ=255)                                                                                                                                                                                                                            c‑GG‑TTAA‑GGTGGGGG‑AAACCAGAAGGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa              <  1:729119/238‑1 (MQ=255)                                                                                                                                                                                                                                          gCGG‑GAATCACCAAGCCCGCCC‑CTTTTACCCGATTTTCCGGAGCGGGA‑GAGAAGTACAT‑CGCTAAAGAAAAC‑CCCACGGCACCAAAGAATTTTGAG‑TTAACGGGCAGGTC‑AAAACCGCCTTCCGGGCACAAAGA‑TTTCAGCGGCTCTGCT‑ACCCAACTGACGCCTTGGAGAAGCAGCGACCAGTACATCTGAATGCCGCCTTCAACAGCTGCCCGAACAAAGATAAACTGACCGGAggt  >  2:502079/1‑237 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTC‑GACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GG‑TTAA‑GGTTGCGG‑GAATCAGCAAGCCCGCCA‑CTTTTACCCGATTTTCCGGTGCGGCA‑GTGAAGTACAT‑CGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAG‑TTACCGTGCAGGGC‑AAAACCGCCTTCCGGGAACAACGA‑TTTCAGCGGCTCGGCG‑CTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGAT  >  NC_000913/3862435‑3862901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑