Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4460CA35.4% 42.9 / 15.9 48intergenic (‑190/‑17)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (10/21);  new base A (9/8);  total (19/29)
Fisher's exact test for biased strand distribution p-value = 2.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTG  >  NC_000913/3206208‑3206670
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    
tttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑Ac                                                                                                                                                                                                                                      <  1:219245/239‑1 (MQ=255)
          tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGT‑GAT‑TTTTTTTA‑ACAAATAACAAAAAATgg                                                                                                                                                                                                                             >  2:236954/1‑239 (MQ=255)
           aCCTGCAAGTCTTTGGCTAAAGGGCAGTTAATCAGCATTGTTAATTATCCGCAGTTGTGATAAGCGCTGTGTATTTCGCAAAACATTGCCATTCCCTTCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAGCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TGTTTCCAGACAAAT‑ACAAAAACTGGAg                                                                                                                                                                                                                           <  2:385633/239‑1 (MQ=255)
              tGCAAGTCTTTGGCTACAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GCA‑GTTTTTCAGACAAAC‑ACaaaaaaacgagtt                                                                                                                                                                                                                         >  2:786883/1‑230 (MQ=255)
              tGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAA‑TTTTTCC‑GTCAAA‑‑ACaaaaaaatgtggttt                                                                                                                                                                                                                       >  2:217794/1‑229 (MQ=255)
                        tGGCTAAAGGCCCGCTTTTCAGCATCGTTAATTATCCGTAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTCGCAAAAAATCTAAAACCACATTTTTAGTGGTAGTTTTTGGC‑GGT‑GAA‑AATTTTCTGACAAAT‑TACAAAACTAGAG‑TTGCCTTGATGAg                                                                                                                                                                                                             >  2:88661/1‑239 (MQ=255)
                        tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAg                                                                                                                                                                                                             <  1:217794/239‑1 (MQ=255)
                        tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAg                                                                                                                                                                                                             <  2:174197/239‑1 (MQ=255)
                            tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAACCCCCATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGa                                                                                                                                                                                                          <  1:786883/238‑1 (MQ=255)
                                       tATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                   <  2:123124/234‑1 (MQ=255)
                                               aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                         <  2:862143/236‑1 (MQ=255)
                                               aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                         <  1:88661/236‑1 (MQ=255)
                                                     aaTTATCCGCAGTTGGGATAAGCGCAGTGTATTTCGCAAAACATGGCCATGCCCTGCTCGGGGGGAATATTCATTCTTATTTTCGCGTTGATTCGCGAGCTGTTAATGACATATGCGGGGTGGCAAAATATATAAACCCACATTATTAGTGGTAGTTGGTGGG‑GGT‑GAA‑GTTATGAAGTGAAAG‑GCAAAGGGTGGAG‑TTGCCATGGTGAGCGAAAGCAATAAGCAACAGGTAGTGAATa                                                                                                                                                                                <  2:486659/239‑1 (MQ=255)
                                                            cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑TAA‑TTTTTTCAGACAAAT‑AACAAAACAGGAG‑TTGCCCTGATGAGCGAAAGGAATAAACAAAAAGCAGTGAAAAAATTggc                                                                                                                                                                         >  1:721796/1‑237 (MQ=255)
                                                                  tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACaga                                                                                                                                                                      <  2:316433/236‑1 (MQ=255)
                                                                  tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                                                                                                                    <  2:1004255/238‑1 (MQ=255)
                                                                         aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑t                                                                                                                                                           <  1:326938/239‑1 (MQ=255)
                                                                           cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTTCATACAAAT‑AAAAAAAATGGAG‑ATGGCATGATGAGCGGAAATAATAAAAAACAAGAAATGAAAAAAATGACAaagaatagtgctaa                                                                                                                                                          >  1:674722/1‑229 (MQ=255)
                                                                           cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGa                                                                                                                                                                                                                            <  1:110222/174‑1 (MQ=255)
                                                                                          aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTTATTCACGAACTGTTAATTACATATTCACTGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTCAAACAAA‑‑AAAAAAAATAGAG‑TTGTCCTTGTGAGTGAAAATAATAAAAAACATGCAGAGAAAAAATTGTAAGAGGTTGTAGC‑T‑CAATTTACAGCCCTGAt                                                                                                                                         >  2:219683/1‑239 (MQ=255)
                                                                                            gaccccgCCATTCCCTGCTCTGGCGAAATTTTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGGGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAA‑ACAAAAACGGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGAttt                                                                                                                                       <  1:643303/233‑1 (MQ=255)
                                                                                            aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTTCAGACAAAT‑ACAAAAAATCGGG‑TTGTCATGATGGGGGAAAGAAATAAGCAAAAAGCTGCGAAAAAGTTGGAAGAGAATGTTGC‑T‑AAATTTTTCGccccgtttt                                                                                                                                       >  1:960/1‑232 (MQ=255)
                                                                                                 tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCTCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTTCAGTCAAAA‑ACAAAAACTGGAG‑GTGGCATGATTAGGGAAAATATTAAGCAAAAAGCAGTGGATAAGGTGAAAGAAGATGTTGC‑TCAACTTAACC‑CCATAATTTTTaa                                                                                                                                   >  2:407250/1‑237 (MQ=255)
                                                                                                 tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑ATTTTTCAGAAAAAA‑ACAAAAAATGGAG‑TTGCCATGATGAGCGAAAGGAAAAAACAAAAAGGAAGGAATAAGTTGAAAGAGATTTTTGC‑T‑AACTTTACCCCCATGGTTTCTAc                                                                                                                                   >  1:358288/1‑238 (MQ=255)
                                                                                                    cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGAAAAAT‑AAAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGT‑T‑AACTTTACCGCCATGATTTCTACCCGa                                                                                                                               <  1:795218/239‑1 (MQ=255)
                                                                                                      ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑AAAAAAAATTGCG‑TTGCCCTGATTAGGGCAAGCAATAAGCAACAAGCAATGAAAAAGCTGATCGAGATTGTTGC‑T‑AACTTTACCACCCTGAATTCTAACCCAAt                                                                                                                             >  1:389198/1‑239 (MQ=255)
                                                                                                        cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCACAAAAAT‑AAAAAAAAAGGAGATGGCCAT‑AAGAGCGAAAGTAATAAACAACAAGAAGTGAATAAAATGAAAGAGATTGTCGC‑T‑AACATTACCGCCTTCATTTTCACCCCAAta                                                                                                                            >  1:359118/1‑237 (MQ=255)
                                                                                                              tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTGGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAATTGGAG‑TTGCCATGAGGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAAAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                                                                                                                     <  1:48968/239‑1 (MQ=255)
                                                                                                                       atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTTCAGAAAAAT‑ACAAAAACTGGAG‑GTGTCATGATGAGTGGAAGAAATAAGCAAAAAGCAGCGAATAAGTTGACAGAGATTGTCGC‑T‑CAATTTAACGCCATGATTTTTACCTGCATGCCCGATGACGtggtgg                                                                                                            >  1:936220/1‑239 (MQ=255)
                                                                                                                       atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTAGC‑GGT‑GAA‑TTTTTCTCGACAAAT‑ACAAAAACTGGAG‑TTGCCATGTTGTGCGAAAGTAATAATCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTAACGCCATGATTTCTACCCGAATGCCTGAGGACGtggtgg                                                                                                            >  2:686494/1‑239 (MQ=255)
                                                                                                                        tatTCATTCTTATTTTCGGGTTGATTCACGAACTGTTAATTACATATTCAGGGTGGAAAAAAATATAAAACCACATTTTTAGGGGTAGTTTGTGGG‑GGT‑GAA‑TTTTTCCAGACAAAT‑AAAAAAACTGGAG‑TGGCCATGATGAGCGAAAGTAATAGGCAACGGGCAGTAAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                           <  1:464319/239‑1 (MQ=255)
                                                                                                                          ttcattcTTATTTCCGGTTTGATTCACGAACTGTTAATTACATATTCCCGGTGGCAAAAAATAAAAAACCTCATTTTTATTGTTAGTTTGGGGC‑GGT‑GAA‑TTTTTCCAGAAAAAA‑ACAAAAACTGGGT‑TTGCCATGATGACCGAAAAAAATAAACAACAGGCAGTAAATAGTTTACCAGAGTTTGTCGC‑A‑AGCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATa                                                                                                         <  2:960/239‑1 (MQ=255)
                                                                                                                                tttATTTTCGCTTTGTTTCCCGAATTGTTAATTACATATACCCGGTGACAAAAAATATAAACCCACTTTTTTAGTGGTGGTTTGGGGG‑GGT‑GAA‑TTTTTACAGAAAAAT‑AACAAAACGGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGGAGTGAAAAAGTTAAAAGAGTTTGTCGT‑T‑ACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                   <  2:777605/238‑1 (MQ=255)
                                                                                                                                  tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑ATTTTTTAAACAAAA‑AAAAAAACTGGAG‑TTGCCATGATGGGCGGAAGTAAAAAACAACAAGAAAGGAAAACAATGACAAAGATTGTCGC‑C‑AACTTTACCGCCATGATTTTTACCCGAATGCCTGCTGTCGTGGTGGAGAAAATaaaa                                                                                                 >  2:464319/1‑239 (MQ=255)
                                                                                                                                        cgcgTTAATTCACAACCTGTTATTTACATATTCAGGGTGCCAAAAAATATAAAACCACATTTTTGGTGTTAGTTTGTGGG‑GGT‑AAA‑TTTTTCCAGAAAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAAAAACCACCAGCCAGTAAATAAGTTGAAAGGGTTTGCCGC‑A‑AATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                           <  1:686494/239‑1 (MQ=255)
                                                                                                                                                             aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑ATTTTTCAAACAAAT‑ACAAAAAATGGAG‑TTGCCATGATGAGGGGAAGGAATAAACAACAAGCAGAGAATAAGTTGACAGAGATTGTCGC‑T‑AAATTTACCGCCATGATTTTTACCCGAAAGCCTGATGACGGGGGGGGTAAACTAAAAAAACTAAAAGATGCC‑GAAAAGtcgtcg                                                                     >  1:935530/1‑239 (MQ=255)
                                                                                                                                                                   atatTCGCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGG‑GAA‑ATTTTTCAAACAAAA‑AAAAAAAATGGAG‑TTTGTATGATGGGTGGAAATAAAAAAAAAAAAGCAAAGAAAAAAGTGACAGAGAATTTTGC‑T‑TAATTTTCCGCCATGATTTTTTACCCAATTCCTGATGACGGGGGGGGTAAAATTAAAAAAATAAAGAGAGCC‑GAAAAGGCGTTGGTgggg                                                               >  2:285422/1‑239 (MQ=255)
                                                                                                                                                                    ttttCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGGGAATAATTTGACAGAGATTTTCGC‑T‑AACTTTACCGCCATGATTTATACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                              <  1:989200/237‑1 (MQ=255)
                                                                                                                                                                    tatTCAGGGTAAAAAAAAATAAAAAACCACTTTGTTAGTGGGAGTTTGGGGG‑GGT‑AAA‑TTTTCCCAAAAAAAT‑AAAGAAACGGAAG‑TTGCGATAATGACAAAAAGTAATAAACACCGGGGAGTTAAAAAGTTGAAAGAGTTTTCCCC‑T‑ATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGCCGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                              <  2:440204/239‑1 (MQ=255)
                                                                                                                                                                     atTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGAAAAAT‑ACAAAAACGGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGaa                                                             <  1:352717/239‑1 (MQ=255)
                                                                                                                                                                      ttCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGG‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAACCTGGAG‑TTGCCATGATGAGCGAAATTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGT‑A‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATggg                                                                <  1:744974/235‑1 (MQ=255)
                                                                                                                                                                         gcGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑AAAAAAACGGGAG‑TTGCCATGATGAGGAAAAGTAAAAAGCAAAAGGCAGTAAAAAAGTTGACAGAGATTGTCGA‑T‑AATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAAtt                                                         <  2:184417/238‑1 (MQ=255)
                                                                                                                                                                           ggggaaaaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACGGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                       <  1:407250/233‑1 (MQ=255)
                                                                                                                                                                           ggTGGCAAAAAATAAAAACCCATATTTTTGGTGGTAGTTTGGGGC‑GGT‑AAA‑TTTTTCCAGAAAAAT‑AAAAAACCTGGAG‑TTGCCATGATGAGCAAAAGTAATAAACAACAGGCAGGAAATAGGTGGAAAGAG‑TTGTCCCGT‑AGGTTTGCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                       <  1:219683/239‑1 (MQ=255)
                                                                                                                                                                            gTGGAAAAAAATAAAAACCCACATTTTTAGGGGTTGTTGTTGGC‑GGT‑GAA‑TTTTCCCAAACAAAT‑ACAAAAACTGGAT‑TTGCCATGATGAGCGAAAGTAATAAACAACAGGCAGTAAATAAGTTGACAGGTTTTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                       <  2:674722/238‑1 (MQ=255)
                                                                                                                                                                             tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAA‑ACAAAAAATGGGG‑TTGCCCTGATGAGCGAAAGTAATAAACAAAAGGCAGTGAATAAATTTACAGAGATTGTCGC‑T‑AACCTTTCCCCCATGATTTTTACCCGAAAGCCTGATGACGTGGTGGGTAAAATAAAAAAACTAAAGGAAGCC‑CAAACCTCTTCGATGGGGGAAATTATc                                                      >  1:950794/1‑238 (MQ=255)
                                                                                                                                                                             tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGG‑GAA‑TTTTTTTAAACCAAA‑AAAAAAAATGGAG‑GTGGCCTGAGGAGCGAAAGTAATAAACAAAAGACAGTGAATAAGTTGAAAAAGATTGTCGC‑T‑AACTTTACCGCCCTGAATTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAAAACATAAAGATGCCGGAAACG‑CGTCGGTggggggaaataatt                                                     >  2:221502/1‑229 (MQ=255)
                                                                                                                                                                                                                           gtaaa‑TTTTTCAAGAAAAAT‑AAAAAAACTGGAG‑TTGCCATGATGAGTGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGaa          <  1:285422/235‑1 (MQ=255)
                                                                                                                                                                                                                                   tttCCAGACAAAT‑AAAAAAACTGGAT‑TTACCATGATGGGCGAAAGTAATAAGCAACAGGCAGTGAATAATTTGAAAGAGATTGGAGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg  <  1:482565/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    
TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAA‑TTTTTCCAGACAAAT‑ACAAAAACTGGAG‑TTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGC‑T‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTG  >  NC_000913/3206208‑3206670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑