Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,665,657	0	C	A	31.9%	223.6 / 23.4	91	V52L (GTA→TTA)	gadX	acid resistance regulon transcriptional activator; autoactivator
Reads supporting (aligned to +/- strand):  ref base C (46/16);  new base A (0/29);  total (46/45)
Fisher's exact test for biased strand distribution p-value = 1.33e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCACGCCGCCCTCTTAAGTCAAATTGATTGAT  >  NC_000913/3665424‑3665886                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAt                                                                                                                                                                                                                                        >  1:358366/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAt                                                                                                                                                                                                                                        >  2:121205/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAt                                                                                                                                                                                                                                        >  1:796048/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAt                                                                                                                                                                                                                                        >  2:816509/1‑239 (MQ=255)  tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAtt                                                                                                                                                                                                                                       >  2:981194/1‑239 (MQ=255)  tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAtt                                                                                                                                                                                                                                       >  1:438224/1‑239 (MQ=255)  tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAtt                                                                                                                                                                                                                                       >  2:735989/1‑239 (MQ=255)    aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAAttt                                                                                                                                                                                                                                      >  1:868160/1‑238 (MQ=255)      ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Ca                                                                                                                                                                                                                                  <  2:868160/239‑1 (MQ=255)       cTCAAGAAAAACAGATAACAACGCGAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCAAGAAGATTTAATGCCGCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Caa                                                                                                                                                                                                                                 <  1:588871/239‑1 (MQ=255)         cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGAGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAaca                                                                                                                                                                                                                               <  2:358366/239‑1 (MQ=255)                aaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTa                                                                                                                                                                                                                        >  1:306539/1‑238 (MQ=255)                      tAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACtt                                                                                                                                                                                                                         <  2:904667/231‑1 (MQ=255)                          aacGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAAt                                                                                                                                                                                                            <  2:168193/239‑1 (MQ=255)                            cGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAAttt                                                                                                                                                                                                          >  2:514589/1‑239 (MQ=255)                                 aGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCtt                                                                                                                                                                                                    <  1:922290/239‑1 (MQ=255)                                 aGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCtt                                                                                                                                                                                                    >  2:561413/1‑239 (MQ=255)                                             ttttACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GACTTT‑GGCTTGCA‑T‑CCGCaaaa                                                                                                                                                                                      >  2:113747/1‑239 (MQ=255)                                                    tAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑AGTCCCTGG‑ACACGAATACAAAATTTT‑CAAAAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAgg                                                                                                                                                                                >  2:650210/1‑238 (MQ=255)                                                       cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTTCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCTTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGCCa                                                                                                                                                                             >  1:476352/1‑238 (MQ=255)                                                       cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Ca                                                                                                                                                                                                                                  <  2:7051/190‑1 (MQ=255)                                                       cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Ca                                                                                                                                                                                                                                  >  1:7051/1‑190 (MQ=255)                                                       cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCa                                                                                                                                                                             >  2:542417/1‑238 (MQ=255)                                                            cTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCa                                                                                                                                                                       >  1:84532/1‑239 (MQ=255)                                                               cATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTa                                                                                                                                                                    >  1:645976/1‑239 (MQ=255)                                                                 tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAaca                                                                                                                                                                                                                               <  1:144325/183‑1 (MQ=255)                                                                 tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAaca                                                                                                                                                                                                                               >  2:144325/1‑183 (MQ=255)                                                                    cGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATa                                                                                                                                                               >  2:176004/1‑239 (MQ=255)                                                                         aTTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGat                                                                                                                                                          >  1:638645/1‑239 (MQ=255)                                                                            cTTTTTCTGAAATAGTCGCTCATATTCCAG‑AAAAACATGAATATCTCTAATAAGGTGAAGAACGTAAAAGGAAGAATTTTTTTTATG‑TGCATGAAATTTTAATCCCCCCCCATA‑GAGC‑AGCGGGAGAAAAA‑AAAAGA‑GCG‑TGTCCTTAA‑ACCCAAAAAAAAAATTTC‑CACCCC‑ATTTATTTTATA‑AAATTT‑GTCTTACA‑T‑CCGCAAAAAAGGGGTCACCGCCATTAAAATAGCGATAtt                                                                                                                                                       <  2:796048/239‑1 (MQ=255)                                                                                   tGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCAtt                                                                                                                                                >  1:179745/1‑239 (MQ=255)                                                                                   tGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCAtt                                                                                                                                                >  1:216520/1‑239 (MQ=255)                                                                                   tGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCAtt                                                                                                                                                >  1:737700/1‑239 (MQ=255)                                                                                     cGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGc                                                                                                                                                             >  1:853192/1‑224 (MQ=255)                                                                                      gATGGTTGCGCAACTTCCAG‑AAAAAAGGAAATATATCTAAAACAGTGATGAACGTATATAAAAGAATCTTTTTTACG‑GGAAGGAAGTTTTTATCCCACCTCCTG‑GACT‑AACGGGA‑AAACA‑AAGAAAGGCG‑TGTCCCTTA‑ACGCAAATAAAAATTTCT‑AAGCCC‑ACTTACCTACTC‑AATTTT‑GGTGTGCA‑C‑CCAAAAAACCCAGGTCCCCGCCATTAAAATAGCGATATTCACCATTaa                                                                                                                                              <  2:360400/238‑1 (MQ=255)                                                                                            tgagcAATTTCCTA‑AAAAACAGGAATATCTCTACTAAAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGAATGAAGATTTAATGCCTCCTCCTG‑GAGA‑ATGGGGAAAAAAA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACAAATAAAAAATTTT‑AAACAC‑ACTTATCTACTA‑AATTTG‑GGCTTGCA‑C‑CCAAAAAAACCAGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                                                                       <  1:600807/236‑1 (MQ=255)                                                                                            tGCGCAACTTCATG‑AACAACAGGAATATCTCTACTACAGTGATACACGAGTAATAAAAAAATTTTTTTATG‑AGCATGAAGTTTTAAAGCTTCCTCCTT‑GAAC‑ATCGAAAGAAAAA‑AAAAAG‑GCG‑TTTCCCTTG‑ACAAAAAAACAAAATTTA‑AAACCC‑TCTTATCTACTA‑AAATTT‑GCCTTGCA‑T‑CCCAAAAAACAAATTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                                                                       <  2:553033/239‑1 (MQ=255)                                                                                            tGCGCAACTACAGA‑AAAACCAGTAATATCTCTACTACATTGATAAACGGATAAAGAAAAAATTTTTTAATA‑TAAATGAAGATTTAATGCCTCCAACGT‑GGGA‑TGCAGGA‑AAATATAAGAAG‑GCG‑GCCCCATAA‑ACAAAAAAAAAAAATTCT‑AAGCAA‑ACTTCTCAACT‑‑AAATTA‑TGGTTGGA‑TACCGAAAAAGCGGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                                                                       <  2:692931/239‑1 (MQ=255)                                                                                            gccgcAACTTCTTA‑AAAAAAAGAAATTTCTCTCATCAAGTGATGAACGATTAATGAAGAATTTTTTTTATG‑TGAATAAAGTTTTAATCCCTCCTCTTT‑GAGC‑ATGGGAAAAAATA‑AAAAAA‑GCG‑TGTCCCTTG‑ACACAAAAAAAAAATTTT‑CACCAC‑ATTTATCTCCTA‑AATTTT‑GTTTTCCA‑C‑CAGAAAAAACAGGGTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                                                                       <  2:737700/237‑1 (MQ=255)                                                                                            gccccAACATCCAG‑AAAAACAGAAATTTCTCTACTACAGTGATGAACGATTAATGAAAAAATTTTTTTATG‑TGCATGAGTATTTACTGCCCCCTCCTT‑GAGC‑ATCGGGAAAAAAA‑ATAAAA‑GCG‑TGTCCTTTG‑ACACCAATAAAAAATTTC‑CAACCC‑ACTTATCTCCAA‑GAATTT‑GTTTGGCA‑C‑CCAAAAAAACCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                                                                       <  2:819943/235‑1 (MQ=255)                                                                                               gcAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTgag                                                                                                                                    >  1:383022/1‑239 (MQ=255)                                                                                                 aaCTTCCAA‑AAAAACAGGAATATCTTTACAACAGGAAAGAAGGAGTAAGAAAGAAACTTTTTTAGG‑TGCATAAAGTTTAAATACCCCCTCTTT‑GAGC‑ATCGGAAAAAATA‑ATGAAA‑GCG‑TGTCCCTGG‑ACACAAAAAAAAAATTTT‑AAACAC‑CCTTTTCTACCC‑AAATTT‑GGTTGGCA‑C‑CCAAAAAAACGAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                                                                  <  2:637872/239‑1 (MQ=255)                                                                                                  acctCCTGAAAAAAAAGGAATACTTCTACAAAAGTGATGAAGGATTAAGGAAAAAATTTTTTTATA‑GTAAAGAAGTTTTAATCCCTCCTAC‑G‑GAGCAATGGGAAAAAAAA‑AAGAAG‑GCG‑TGTCCCTTG‑ACACAAATAAAAAATTTA‑CAACAC‑ATTTATCTACAC‑GATTTT‑GGTTTCCA‑C‑CCAAAAAAACCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                                                                  <  2:84532/236‑1 (MQ=255)                                                                                                  aCTTCTTA‑AAAAACAGGAATATCTCTACTACAGGGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGAATGAAGATTTAATCCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGCCCTTTG‑ACACAAATAAAAAATTTT‑CAACAC‑ACTTATCTACTA‑GAATTT‑GGCTTCCA‑T‑CCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAat                                                                                                                                 <  1:981194/239‑1 (MQ=255)                                                                                                     taccaaaaaaaCAGGAATCTCATTCCTACGGTGAAGACAGAGTAAAGAAAAATTTTTTTTAAG‑GGAATGAA‑ATTTAAATCCCCCCCCTTAGAGC‑A‑GGGGAAAAAAA‑AGTAAA‑GGGTTGCCCTTTG‑CCAAAAAAAAAAATTTCA‑CAACCC‑CTTTACCTACTA‑AATTTT‑GGCTTACA‑C‑CCAAAAAACCCGGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTgaga                                                                                                                                   <  2:890233/229‑1 (MQ=255)                                                                                                         aaaaaaaCAGGAATATCTCTCATCAAGTATTAAATGAGAAATGAAAAAATTTTTTTTAG‑GGAAGAAATATTTAGTGCCTCCTCTTG‑GAGA‑TTGGGGAAAAATA‑TAGAAA‑GCG‑TGTCCTTTG‑ACAATAATAAAAAATTTA‑CAACCC‑TCTTATCTCCTC‑GAATTT‑GGCTGGAA‑T‑CCGAAAAAACCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAttt                                                                                                                           <  1:752592/237‑1 (MQ=255)                                                                                                            aaaaaaGGAAAATTTATAATAAAGTGATGAACGAGTAATGAAAAAACTTTTTTATG‑AGAATGAAGTTTTAATGCCTCCTCCTT‑GAGA‑AAGGGGGAAAAAA‑ATGAAA‑GCG‑TGTCCTTTG‑ACACAAAAAAAAAATTTC‑CAACAC‑ACTTATCTACTC‑GATTTT‑GGCTTGCA‑C‑CCGAAAAAACCGGGTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                                                            <  2:383022/235‑1 (MQ=255)                                                                                                                     atttcttaacaacAGTGATGAACTAATATTGAAAAAATTTTTTTAGT‑TGCAGAAATATTTACTGCCCCCCCGTG‑GAGC‑ATGGGGAGAAAAA‑AGAAAA‑GCG‑TGTCCCTTA‑ACACGAATAAAAAATTAT‑CAACAC‑ACTTATCTCCAC‑GAGTTT‑GGTTTGCC‑C‑CCACAAAACCCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                                                               <  2:481685/228‑1 (MQ=255)                                                                                                                     atatCTCTCCTAAAGTGAGTAACGAGTAATAAAAAAATTTTTTTATG‑TGCATAAAGTTTTAATGCCTCCTCCTT‑GACC‑ATCGGGAAAAATA‑AAGAAA‑GCG‑TGTCCCTTG‑ACACAAAAACAAAATTTT‑CACCCC‑ACTTATCTACGA‑GATTTT‑GGCTTCCA‑C‑CCGAAAAACCCGGGTCTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                                                               <  1:561413/239‑1 (MQ=255)                                                                                                                     atatCTCTACTACAGTGATGAACGATTAATGAAGAAACTTTTTTATG‑TGCATGAAGTTTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAAAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACAAATACAAAATTTC‑CAACAC‑ACTTATCTACTC‑GATTTT‑GGCTTGCA‑T‑CCGAAAAAACCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                                                               <  1:542417/239‑1 (MQ=255)                                                                                                                     atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAAAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATAAAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑C‑CCGCAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                                                               <  1:875398/239‑1 (MQ=255)                                                                                                                             actacAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Caa                                                                                                                                                                                                                                 >  2:944190/1‑122 (MQ=255)                                                                                                                             actacAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATATAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑Caa                                                                                                                                                                                                                                 <  1:944190/122‑1 (MQ=255)                                                                                                                                 cAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACa                                                                                                   >  1:846731/1‑239 (MQ=255)                                                                                                                                  aGTGATGAACGAGAAATGAAAAAATTTTTTTAGG‑TGAAGAAAATTTTAATGCCCCCCCTTT‑GGGC‑ATGGGGAAAAAAA‑ATGAAA‑GCG‑TGTCCCTTA‑ACACAAATACAAAATTTT‑CAACAC‑CCTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa                                                                                                  <  1:121205/239‑1 (MQ=255)                                                                                                                                  aGTAATGAAGGGGAAAAGAAAAAATTTTTTTAGG‑AGAAGAAAATTTTAATCCCCCCCCCTG‑GACC‑TTCGGGAAAAAAA‑ATAAAA‑GCG‑TGCCCCTTG‑ACACAAATAAAAAATTTC‑AAACAC‑ACTTATCTACCA‑GATTTT‑GGCTTACA‑C‑CCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa                                                                                                  <  2:645976/239‑1 (MQ=255)                                                                                                                                    tgatgaACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGGAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAt                                                                                                 >  1:1031418/1‑238 (MQ=255)                                                                                                                                    tgatgaACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc                                                                                                                                             >  2:906717/1‑194 (MQ=255)                                                                                                                                    tgatgaACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAt                                                                                                 >  1:292211/1‑238 (MQ=255)                                                                                                                                    tgatgaACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAt                                                                                                 >  1:603178/1‑238 (MQ=255)                                                                                                                                     gatgaAGGAATAATGAAGAACATTTTTTATG‑TGAATGAAAATTTAATGCCCCCTCTTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCGTG‑ACACGAATAAAAAATTTT‑CAACAC‑ACTTATCTACTC‑GATTTG‑GTCTTTCA‑G‑CCGAAAAACCCAGCCCACCGCCATTAAAATAGCGATATTCACCATTAGCCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAtt                                                                                                <  1:266141/238‑1 (MQ=255)                                                                                                                                     gatgaACGATAAAAAAAGATATTTTTTTATG‑GACAAGAAGTTTTAACCCCTCCTCCTA‑GAGC‑AAAGGGAAAAAAA‑AGAAAA‑GGT‑TGCCCCTTG‑ACACAAAAAAAAAATTTT‑AAACCC‑TTTTATCTACAC‑AATTTT‑GGTTTCCA‑C‑CCACAAAAACCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                                                                    <  2:603752/234‑1 (MQ=255)                                                                                                                                     gatgaACGAGTAATGAAAAAATTTTTTTATG‑TACATAAAGATTTAATCCCTCCTCCTT‑GAGC‑ATCGGAAAAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATAAAAAATTTT‑CAACCC‑ACTTATCTACTA‑AAATTT‑GGCTTGCA‑C‑CCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                                                                    <  1:626829/234‑1 (MQ=255)                                                                                                                                      atgaACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc                                                                                                                                             >  1:268395/1‑192 (MQ=255)                                                                                                                                       tgaAGGAGTAATGAAAAATTTTTTTTATG‑TAAATAAAGTTTTAATGCCCCCTCAGA‑GAGA‑ATGGGGAAAAATA‑ATGAAA‑GCG‑TGCCCTTTG‑ACACAAAAAAAAAATTTA‑AAACAC‑ATTTATCTACAC‑GATTTT‑GGCTTGCA‑T‑CCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTccc                                                                                             <  2:887512/239‑1 (MQ=255)                                                                                                                                         aaCGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCAt                                                                                           >  1:768735/1‑239 (MQ=255)                                                                                                                                         aaCGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCAt                                                                                           >  2:435145/1‑239 (MQ=255)                                                                                                                                               tAATGAAGAAATTTTTTAAGG‑TAAAAAAATTTTTTATGCCTCCACCTT‑GAGC‑AAGGGAAGAAATA‑AGAAAG‑GGG‑TGCCCCTTG‑AGACAAAAAAAAATTTTT‑CAACCC‑ACTGATTTTTTC‑GATTTT‑GGC‑CGCACT‑CCACAAAAACCAGACGCCCGCCATTAAAATAGCGATATTCACCATTAACCAGGGt                                                                                                                                       <  2:1023905/189‑1 (MQ=255)                                                                                                                                               agaacaggaaATTTTTTTATGTTGAATGAAGTTTTAATCCCT‑CTCCCT‑TAGC‑AGTGGGAAAAAAA‑AATTAA‑GGT‑TTGCCCTTT‑GCTTAAAAAAAAAATTTTACAAC‑C‑CCTTATCTACACAGAATTT‑GTCTTCCA‑C‑CCCAAAAAACCAGTATACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGt                                                                                      <  2:72934/232‑1 (MQ=255)                                                                                                                                                aaTGAAAAAATTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTG‑GAGC‑ATCGGGAAAAAAA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACAAATACAAAATTTT‑CAACAC‑ACTTATCTACCC‑GATTTT‑GGCTTGCA‑T‑CCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGa                                                                                    <  1:735989/239‑1 (MQ=255)                                                                                                                                                         aCTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt                                                                           >  1:894818/1‑239 (MQ=255)                                                                                                                                                         aCTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCCGG‑ACAAGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAatatat                                                                                                                             >  1:1023905/1‑189 (MQ=255)                                                                                                                                                              tatATG‑TGCATGAAGTTTTAACGCCTCCCTCTT‑GAGC‑ATCGTAAAAAATA‑AGAAAA‑GCG‑TGTCCTTTG‑ACACAAAAAAAAAATTTT‑AAACAC‑ACTTATCTACTA‑TATTTT‑GGTTGGCA‑C‑CCAAAAAAACCAGTTCGCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACt                                                                      <  2:846731/237‑1 (MQ=255)                                                                                                                                                                 aTG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAg                                                                            >  1:72934/1‑230 (MQ=255)                                                                                                                                                                            aGATTTAACGCCTCCCCCTT‑GGGC‑TGGGGGAAAAAAA‑ATAAAA‑GCG‑TGTCCTTTG‑AAAAAAAAACAAATTTTC‑AAACCC‑ACTTATCTCCTC‑AATTTT‑GGCTGCCA‑T‑CCGCAAAAACCGGGTCTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACAt                                                           <  1:354515/237‑1 (MQ=255)                                                                                                                                                                             gATTTAACCCCTCCCCCTT‑AGGC‑ATCGGGAAAAAAA‑ATGAAA‑CCG‑TTCCCCTGG‑CCAAGAAAAAAAATTTTA‑CAACCC‑ATTTATCTA‑TC‑CAATTTGGGTTTCCA‑C‑CCGAAAAAACCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAAt                                                                                                         <  2:747330/190‑1 (MQ=255)                                                                                                                                                                               tttAATGCCCCCTCCTT‑GCGC‑ATCGGGAAAAAAA‑ATGAAA‑GCG‑TGCCCCTTG‑CCACAAATACAAAATTTT‑CAACCC‑ACTTATCTACTC‑AATTTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATaaa                                                        <  1:849024/237‑1 (MQ=255)                                                                                                                                                                                    tccccccgcctG‑GAGC‑ACCGGAAAAAAAA‑ATGAAA‑GCT‑TCCCCCTTA‑AAAAGAAAAAAAAATTTT‑CACACC‑CCTTACCTACTC‑AATTTT‑GGCTTACA‑C‑CCCAAAAAACCAGGTACCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTa                                                 <  2:179745/231‑1 (MQ=255)                                                                                                                                                                                    tGCCTCCTCCTT‑GAGC‑ATGGGAAAAAATA‑ATGAAA‑GCT‑TGTCCCTTA‑ACACGAATAAAAATTTTT‑CAACCC‑ATTTATCTCCTG‑GATTTT‑GGTTTGCA‑C‑CCACAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTa                                                 <  1:650210/239‑1 (MQ=255)                                                                                                                                                                                      cctcctcctG‑GGGC‑TCCGGGAAAAATA‑ATGAAA‑GCT‑TGTCCTTTG‑ACACAAAAAAAAATTTTC‑CAACAC‑CTTTATCTCCTC‑AATTTT‑GGCTTCCA‑T‑CCACAAAAACCGGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACt                                               <  1:113747/239‑1 (MQ=255)                                                                                                                                                                                       ctcctcctT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAACAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc                                                                                               >  1:747330/1‑190 (MQ=255)                                                                                                                                                                                              actgagaagaggggAAAAAAA‑AGAAAA‑GCG‑TGCCCTTTG‑ACA‑AAAAAAAAAATTTT‑AAAAACAACTTATCATCTA‑GAATTT‑GGCTTGCC‑C‑CAGAAAAAACGGGGACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTttat                                         <  2:894818/228‑1 (MQ=255)                                                                                                                                                                                                      aTCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGa                                                                                                     >  1:886174/1‑171 (MQ=255)                                                                                                                                                                                                       tCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACa                                                            >  1:360080/1‑211 (MQ=255)                                                                                                                                                                                                        cGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAt                                                                                   >  1:56013/1‑187 (MQ=255)                                                                                                                                                                                                        cGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGc                                >  1:336727/1‑238 (MQ=255)                                                                                                                                                                                                              aaaaaaagaaaa‑GAG‑TGTCCCTAG‑ACACAAATAAAAAATTTT‑CAACAC‑ACTTATCTACTC‑AAATTT‑GGCTTCCA‑T‑CCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCAcgccg                          <  2:603178/230‑1 (MQ=255)                                                                                                                                                                                                               aaaa‑atAAAA‑GCT‑TG‑CCCTTGCACAAAAATAAAAAATTTT‑CAACCC‑CTTTATCTCCTC‑AATTTT‑GGCTTGCA‑T‑CCGAAAAACCCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCACgccgcc                        <  1:514589/236‑1 (MQ=255)                                                                                                                                                                                                                               tgtCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCACGCCGCCCTCTTAAGTCaaa           >  1:131298/1‑239 (MQ=255)                                                                                                                                                                                                                                         acacGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCACGCCGCCCTCTTAAGTCAAATtgattgat  >  1:702607/1‑239 (MQ=255)                                                                                                                                                                                                                                               aTACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTa                                                                                        >  1:685809/1‑147 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG‑AAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATG‑TGCATGAAGATTTAATGCCTCCTCCTT‑GAGC‑ATCGGGAGAAATA‑ATGAAA‑GCG‑TGTCCCTTG‑ACACGAATACAAAATTTT‑CAACAC‑ACTTATCTACTC‑GAATTT‑GGCTTGCA‑T‑CCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAATGTAGCACGCCGCCCTCTTAAGTCAAATTGATTGAT  >  NC_000913/3665424‑3665886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑