New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2066558 =NA (NA)60 (0.330) 19/182 17.1 100% noncoding (796/1195 nt) IS5 repeat region
?NC_000913 2066607 = 0 (0.000)noncoding (747/1195 nt) IS5 repeat region
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 267 total aligned reads displayed.

CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAgcgcccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2066655‑2066558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGC  >  NC_000913/2066607‑2066711
                                                                                                                                                                                                           
CATGGGGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  1:4321048/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  1:339542/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  1:1324540/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  2:4439016/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  1:2753807/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          <  2:3697258/99‑1
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  2:2824345/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  2:2634313/1‑99
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGCGGATGTGGACTGGCTGATCGCCGAG                                                                                                          >  2:3993049/1‑99
CATGGAGAGGAGCAATTTGGCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAACTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAG                                                                                                          <  2:1975939/99‑1
 cTGGAGAGGACCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         >  2:4698755/2‑99
 ATGGGGAGGATGAAGTTGGCGCAGCCGATGCCGGCTACCAAGGGGCGTCGCAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:2459305/99‑1
 ATGGGGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  2:4514251/99‑1
 ATGGAGAGGAGCGCTTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACCGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTTGCTGATCGCCGAGC                                                                                                         <  2:3849141/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:3086417/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:2800807/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:2967882/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:3779086/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:4035284/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  2:1861914/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         >  2:4027315/1‑99
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  1:1548759/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  2:93363/99‑1
 ATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGACGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         >  1:638596/1‑99
 ATGGAGAGGAGCAAGTTGGCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGC                                                                                                         <  2:1588845/99‑1
  TGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCG                                                                                                        >  1:1992968/1‑99
  TGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCG                                                                                                        >  1:2022618/1‑99
   GGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGC                                                                                                       >  1:2387371/1‑99
   GGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGC                                                                                                       >  1:2199823/1‑99
   GGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGC                                                                                                       <  1:39066/99‑1
   GGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGC                                                                                                       >  1:25328/1‑99
    GAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCC                                                                                                      >  1:1839196/1‑99
    GAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCC                                                                                                      >  2:3123804/1‑99
    GAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCC                                                                                                      >  1:1781545/1‑99
    GAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCC                                                                                                      <  1:4613219/99‑1
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCTAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  2:4837072/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     <  1:893834/99‑1
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  1:4406404/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  1:834541/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  1:974077/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  1:3635632/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     >  1:3621435/1‑99
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCC                                                                                                     <  2:1699764/99‑1
     AGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCGGGCCGAGGAGGACGTGGAATAGCTGATCGCCGAGCGCCC                                                                                                     >  1:4850704/1‑99
     AGAGGAGCAATTTGTCTCAGAAGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGTCCGAGGTGGATGTGGACTGGCTGATCGCCGATCGCCC                                                                                                     >  2:758187/1‑99
      GAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGTTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCC                                                                                                    <  1:909774/99‑1
      GAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCC                                                                                                    <  1:2984309/99‑1
      GAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCC                                                                                                    >  1:3912171/1‑99
      GAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCC                                                                                                    <  2:3580921/99‑1
                                CGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAA                                                                          >  1:1356637/1‑99
                                   CTACCAATGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATT                                                                       >  1:3381768/1‑99
                                   CTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCAAGGTGGATGTGGACTGGCTGATCGCAGAGCCCCGCTTGTTAGCCGGCATAGGCTGAGACAAAct                                                                       >  2:4658523/1‑97
                                    TACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTG                                                                      >  1:4684618/1‑99
                                      CCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCT                                                                    >  2:352949/1‑99
                                      CCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCT                                                                    >  1:1652359/1‑99
                                      CCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCT                                                                    >  1:2745213/1‑99
                                      CCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCT                                                                    >  2:2617351/1‑99
                                       CAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTC                                                                   >  1:959193/1‑99
                                       CAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTC                                                                   >  2:3204121/1‑99
                                       CAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTC                                                                   >  2:549855/1‑99
                                       CAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCAGCTGAGACACATTGCTC                                                                   >  1:4767578/1‑99
                                       CAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGACCCTAGGTAGCCGGCATCGGCTGAGACAAATTGCTC                                                                   >  1:4877278/1‑99
                                       CAAGGGGAGCCACAGCGCGAGGAGCTGGCCGCGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGCGACAAATTGCTC                                                                   >  2:4864126/1‑99
                                        AAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCC                                                                  >  1:5005981/1‑99
                                         AGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCT                                                                 >  1:1075936/1‑99
                                         AGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCT                                                                 >  2:2474068/1‑99
                                         AGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCT                                                                 >  1:5110130/1‑99
                                          GGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGCCAAATTGCTCCcc                                                                >  2:1796100/1‑97
                                          GGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTC                                                                >  1:71697/1‑99
                                           GGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGCGACAAGTTCCTCCTCT                                                               >  2:4204753/1‑99
                                            GGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTC                                                              >  2:4320476/1‑99
                                                                        GTGGATGTGGACTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAG                                  <  1:2517340/99‑1
                                                                                   CTGGCTGATCGCCGAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGT                       <  2:3472505/99‑1
                                                                                             ctgtAGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCCGCTGATTGAGGTCATGCTCGTTGGCCGCGGT             >  2:4463483/5‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  1:3019826/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  2:846022/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  1:3135817/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  1:3541930/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  1:4096442/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  1:4638043/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  1:5153333/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  2:211330/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  2:1067903/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  2:1300238/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  1:2099562/99‑1
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        >  2:189613/1‑99
                                                                                                  GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGGTGGCCGCGGTGGTGA        <  2:4914750/99‑1
                                                                                                  GCGCCCCCTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGA        <  2:2368192/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  1:2315572/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  1:1016871/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  2:2249426/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  2:683492/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  1:1232119/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  1:812560/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  2:3641438/99‑1
                                                                                                   CGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCAGGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       <  2:2378427/99‑1
                                                                                                   CGCCCCTTGGTAGCAGGCATCGGCTGAGACAAATTGCTCCTCTCGATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       >  1:4505202/1‑99
                                                                                                   CGCCCCTTGGGAGACGGCATCGGCTGAGACAAATTGCTCCTCTGCATACAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAC       >  1:4548894/1‑99
                                                                                                     CCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTA     >  2:1371965/1‑99
                                                                                                       CCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGG   <  1:333483/99‑1
                                                                                                                                                                                                           
CATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAgcgcccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2066655‑2066558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACTAGGC  >  NC_000913/2066607‑2066711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.