Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,968,900 IS5 (–) +4 bp coding (985‑988/1104 nt) wecA → UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)177 (0.890) 99/196 0.5 99.4% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3968903 1 (0.010)coding (988/1104 nt) wecA UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase
* ? NC_000913 = 3653230NA (NA)233 (1.170) 123/196 0.0 99.6% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3968900 = 1 (0.010)coding (985/1104 nt) wecA UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase

Only 100 of 177 total aligned reads displayed.

TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289013‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC  <  NC_000913/3968903‑3968806
                                                                                                                                                                                                 
       ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAG                                                                                         >  1:359322/1‑99
        TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGA                                                                                        <  1:4634326/99‑1
          TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGC                                                                                      <  1:3801626/99‑1
            CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCAC                                                                                    <  1:2671405/99‑1
             GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACC                                                                                   >  1:141587/1‑99
              GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCA                                                                                  <  1:1529002/99‑1
               GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAG                                                                                 >  2:3695830/1‑99
                AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGC                                                                                <  1:1611190/99‑1
                 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCA                                                                               >  2:2214904/1‑99
                 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCA                                                                               <  2:3148740/99‑1
                 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCA                                                                               >  1:1992848/1‑99
                 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCA                                                                               >  2:1522402/1‑99
                  AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCAT                                                                              >  2:2620184/1‑99
                   acAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTAAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATG                                                                             >  2:776833/3‑99
                   AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCCCTTATTCGCACCTTCCCTAGCAAAACGAGCACCAGCATG                                                                             >  2:132958/1‑99
                     AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGAC                                                                           <  1:1319393/99‑1
                          GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACT                                                                      >  1:3203474/1‑99
                           gcgCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTGCCCTAGCAAAAAGAGCACCAGCATGACCCACTC                                                                     >  2:2384168/4‑99
                           gcaCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTC                                                                     <  2:2112062/96‑1
                            CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCC                                                                    >  2:2464269/1‑99
                             TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCG                                                                   <  1:2282709/99‑1
                             TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCG                                                                   >  2:4148750/1‑99
                             TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCG                                                                   >  2:1103669/1‑99
                             TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCG                                                                   >  2:4405126/1‑99
                              CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGG                                                                  >  2:273411/1‑99
                              CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACAAAAAAAAAAAAAAAGAGCACCAGCATGACCCACTCCGG                                                                  <  2:4319282/99‑1
                               AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGGAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACCCCGGG                                                                 >  1:314914/1‑99
                               AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGG                                                                 >  1:3858852/1‑99
                                AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGA                                                                >  1:1820600/1‑99
                                   ATGAAGAAATGAGATGACTGAGTCAGACGAGAAGAATTTCCCCGCTTATTCGCACCTTGCCTAGCAAAAAGAGCACCAGCATGACCCCCTCCGGGACAA                                                             >  1:4567631/1‑99
                                     GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAA                                                           <  1:3531087/99‑1
                                     GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAA                                                           >  2:3610392/1‑99
                                     GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAA                                                           >  1:4304189/1‑99
                                      AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAT                                                          >  1:2898243/1‑99
                                      AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAT                                                          >  2:3761104/1‑99
                                      AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAT                                                          <  1:4815897/99‑1
                                      AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAT                                                          >  1:814735/1‑99
                                      AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTACCCGCTTATTCGCACCTTCCCTAGCAAACAGAGCACCAGCATGACCCACTCCGGGACAAAAT                                                          >  2:2233718/1‑99
                                        GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA                                                        >  2:1910491/1‑99
                                        GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA                                                        >  2:1419878/1‑99
                                        GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA                                                        >  2:514135/1‑99
                                        GAAATGAAAGGACTGAGTCAGCCAAGAAGAATGTCCCCGCTTATTGGCACCTTCCCTAGCAAAAAGAGCACCAGCATTACCCGCTCCGGGACAAAATGg                                                        <  2:621321/99‑2
                                          AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGA                                                      >  2:4480170/1‑99
                                          AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGA                                                      >  1:59734/1‑99
                                          AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGA                                                      <  1:3882806/99‑1
                                          AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGA                                                      <  1:2061665/99‑1
                                           ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAA                                                     >  2:2825322/1‑99
                                            TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCACTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAAT                                                    >  2:4586164/1‑99
                                              AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATAT                                                  >  2:3220586/1‑99
                                               AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATT                                                 <  1:515291/99‑1
                                               AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATT                                                 <  2:2989726/99‑1
                                               AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATT                                                 <  1:1359707/99‑1
                                                ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTC                                                >  1:142866/1‑99
                                                ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTC                                                >  1:2815333/1‑99
                                                 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCT                                               <  2:2849891/99‑1
                                                  GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTG                                              >  1:2105330/1‑99
                                                   ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGGATATTCTGC                                             <  1:3163096/99‑1
                                                   ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGC                                             <  1:4964442/99‑1
                                                     TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCA                                           <  2:1068164/99‑1
                                                           AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGCCAAAATGCGAATATTCTGCCAGCACGC                                     <  2:1499510/99‑1
                                                           AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGC                                     <  1:4980418/99‑1
                                                            GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCC                                    >  1:3711009/1‑99
                                                               GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAAT                                 >  1:3465945/1‑99
                                                                AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCTGGACAAAATGAGAATATTCTGCCAGCACGCCAATG                                >  2:4133049/1‑99
                                                                 GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGG                               <  2:1577257/99‑1
                                                                  AAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGA                              >  2:1802674/1‑99
                                                                    GAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAG                            >  1:1124527/1‑99
                                                                         TCCCCGCTTATTCGCACCTTCCCTAACAAAAAGAGCACCAGCATGAACCACTCTGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGC                       >  2:4738027/1‑99
                                                                          CCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCA                      >  2:23596/1‑99
                                                                          CCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCA                      <  1:2873563/99‑1
                                                                           CCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGCATATTCTGCCAGCACGCCAATGGCAGCGAGCAG                     >  1:4917863/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCCATGGAAGCGAGCAGT                    >  2:4202355/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT                    >  2:4950031/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT                    >  2:3271566/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT                    >  2:1998080/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT                    >  1:4991677/1‑99
                                                                            CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT                    >  2:4394148/1‑99
                                                                             CGCTTACTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAGGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTG                   <  2:3369218/99‑1
                                                                              GCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCAGGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCTATGGAAGCGAGCAGTGC                  >  2:3904449/1‑99
                                                                                  ATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCG              >  1:4535691/1‑99
                                                                                   TTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGGGG             <  1:3983416/99‑1
                                                                                   TTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGG             >  2:3128495/1‑99
                                                                                    TCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGC            >  1:3315594/1‑99
                                                                                     CGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCA           >  1:5114174/1‑99
                                                                                      GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA          >  1:2479018/1‑99
                                                                                      GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA          <  2:4639497/99‑1
                                                                                      GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA          >  1:5146929/1‑99
                                                                                      GCAACTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA          >  2:4282999/1‑99
                                                                                       CACCTTCCCTCGCAACAAGAGCACCAGCATGACCTCCTCCGGGACAAAATGAGAATATTCTGCCAGCACGTCAATTGTAGCGAGCAGTGCTGCGGCAAG         <  2:1844865/99‑1
                                                                                        ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG        <  1:1139082/99‑1
                                                                                        ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG        <  2:3679607/99‑1
                                                                                        ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG        <  1:772414/99‑1
                                                                                        ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG        <  1:2913918/99‑1
                                                                                         CCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGG       <  2:4078600/99‑1
                                                                                         CCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGG       >  1:2885037/1‑99
                                                                                         CCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATACTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGG       >  2:1223249/1‑99
                                                                                             CCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAAT   <  1:2435904/99‑1
                                                                                             CCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAAT   >  2:860704/1‑99
                                                                                             CCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAAT   >  2:92673/1‑99
                                                                                              CCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC  >  1:913882/1‑99
                                                                                                                                                                                                 
TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289013‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC  <  NC_000913/3968903‑3968806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.