| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,777,977 | A→T | intergenic (+195/+169) | ypjF → / ← ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,777,977 | 0 | A | T | 99.1% | 775.6 / NA | 229 | intergenic (+195/+169) | ypjF/ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (98/128); minor base G (0/2); total (98/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGAC > NC_000913/2777882‑2778071 | ttCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGccc < 1:3889233/99‑1 (MQ=255) tCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCcca > 1:3589373/1‑99 (MQ=255) tttAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCccacca > 2:2141013/1‑99 (MQ=255) aGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATc > 2:2426323/1‑99 (MQ=255) aGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATc < 2:2917167/99‑1 (MQ=255) aGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATc < 1:4346709/99‑1 (MQ=255) ggATCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCa < 1:3472259/99‑1 (MQ=255) ggACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCccaccagatc > 2:3770078/1‑95 (MQ=255) ggACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCa > 1:3121256/1‑99 (MQ=255) ggACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCa > 1:2538599/1‑99 (MQ=255) ggACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCa < 2:4871526/99‑1 (MQ=255) gACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCAt > 1:4278561/1‑99 (MQ=255) gACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTAAGACTCCGCCTGCCCACCAATCAt > 2:1128277/1‑99 (MQ=255) aCCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATg < 2:1030757/99‑1 (MQ=255) aCCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATg > 2:4571236/1‑99 (MQ=255) aCCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAAACATg > 2:2634156/1‑99 (MQ=255) ccAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCACTTCAGACTCCGCCTGCACACCAATCATGa > 1:1512146/1‑99 (MQ=255) ccAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGa > 1:1397952/1‑99 (MQ=255) ccAACAATGGGACCAAAATGAAAATTGAACTAAAGATTACAATAAATTTAACAACAAGTTACACCACCAATTCCGACTCCGCCTGCCCACCAATCATGa > 2:3116123/1‑99 (MQ=255) caacaaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCTCACCAATCATGAt > 1:1717445/1‑99 (MQ=255) caacaaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGAt > 2:4966033/1‑99 (MQ=255) caacaaTGAGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGAt < 2:3912209/99‑1 (MQ=255) acaaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTg > 1:2253359/1‑99 (MQ=255) acaaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTg > 2:2070620/1‑99 (MQ=255) caaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTgg > 1:2214396/1‑99 (MQ=255) aaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGa > 1:4982390/1‑99 (MQ=255) aaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGa < 2:1276989/99‑1 (MQ=255) aaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGa < 2:3088662/99‑1 (MQ=255) aaTGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAAGTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGa < 2:3230381/99‑1 (MQ=255) tGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACg < 1:530310/99‑1 (MQ=255) ggACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGCTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGgt > 2:394330/1‑99 (MQ=255) gACCAAAATGAAAATTGAACTGAAGAGTACAATCAATTTAACAACAAGATACACAACCAATTCAGACTCCGCCTGCCCACCAACCATGATTGGACggcg > 2:525829/1‑97 (MQ=255) aCCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGgtgt < 2:3782879/99‑1 (MQ=255) ccAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACAAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTa > 2:1665870/1‑99 (MQ=255) cAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTaa < 2:3276668/99‑1 (MQ=255) cAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTaa < 1:4205212/99‑1 (MQ=255) tctaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg < 1:1471421/96‑1 (MQ=255) aaaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg < 2:2770812/99‑1 (MQ=255) aaaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg < 2:4220444/99‑1 (MQ=255) aaaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg > 2:915323/1‑99 (MQ=255) aaaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg < 1:3095072/99‑1 (MQ=255) aaaaCGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAg > 1:2520025/1‑99 (MQ=255) aaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGa > 2:77549/1‑99 (MQ=255) ataaaaaTCGAACTGAAGATACCAATCAATTTAACAACCATTTACGTAACCAATTCAGTCTCCGCCTGCCCACCAGTCATGCTTGGACGGTGTAAGGac < 2:4659500/96‑1 (MQ=255) tGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGaga > 2:1439656/1‑97 (MQ=255) gAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGacaa < 1:3412819/99‑1 (MQ=255) gAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGacaa > 1:4072484/1‑99 (MQ=255) aaaaTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGagaac < 2:4282821/99‑1 (MQ=255) aaaaTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGacaac < 2:1392726/99‑1 (MQ=255) aaTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAacac < 2:4055307/99‑1 (MQ=255) aTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACAcc < 1:2765139/99‑1 (MQ=255) gAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGTACGGTGTAAGGACAACACcaac < 2:443441/99‑1 (MQ=255) aaCTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACcaaca > 1:1125605/1‑99 (MQ=255) cTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACaaa > 2:344118/1‑99 (MQ=255) tGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACaaaa > 2:619263/1‑99 (MQ=255) gaGATTACAACCTATTTAACAACAAGTTACACAAACAATTCAGACTCTGCCTGCCCGCCAATCATGATTGTATGGTGTAAGGACAACACCAACAAAAAc < 2:2244266/98‑1 (MQ=255) aaGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAAc > 1:2419018/1‑99 (MQ=255) aaGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAAc > 1:4867662/1‑99 (MQ=255) aTTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAgg > 1:1996030/1‑99 (MQ=255) tACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGaa > 2:3381149/1‑99 (MQ=255) tACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGaa < 1:1320301/99‑1 (MQ=255) tACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGaa < 2:2448672/99‑1 (MQ=255) aatcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGtt < 1:3317477/99‑1 (MQ=255) aatcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGtt < 1:3041323/99‑1 (MQ=255) atcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGAAAACAACAACAAAAACAGGAAGTTa < 2:690590/99‑1 (MQ=255) tcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACAGTGTAAGGCCAACACCAACAAAAACAGGAAGTTAg > 2:3643054/1‑99 (MQ=255) caatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGa < 2:1898180/99‑1 (MQ=255) aatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGaa < 1:4691089/99‑1 (MQ=255) aatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGaa < 2:1991432/99‑1 (MQ=255) atTTAACAACAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAg > 1:17554/1‑99 (MQ=255) aacaacAAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGtctc > 1:1941977/1‑99 (MQ=255) aacaacAAGTTACACAACCAATTCAGACTCCGCCTGCCAACCAATCATGATTGGACGGTGTAAGAAAAAAAAAAAAAAAAACAGGAAGTTAGAAGtctc < 2:1855389/99‑1 (MQ=255) acaacaAGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCa < 2:4914218/99‑1 (MQ=255) caacaaGTTACACAACCAATTCAGACGCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAGAACAGGAAGTTAGAAGTCTCAg < 1:1016459/99‑1 (MQ=255) aacaaGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGc > 1:2204720/1‑99 (MQ=255) acaaGTTACACAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCa > 1:2175817/1‑99 (MQ=255) acacAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACAcc < 1:4270949/99‑1 (MQ=255) acacAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACAcc > 1:4448993/1‑99 (MQ=255) acacAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACAcc > 1:43670/1‑99 (MQ=255) acacAACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACAcc > 2:1440934/1‑99 (MQ=255) cacaACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCg < 2:1730548/99‑1 (MQ=255) acaACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGa > 1:3216189/1‑99 (MQ=255) caACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCgtc < 1:1853062/99‑3 (MQ=255) caACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAc < 2:2165457/99‑1 (MQ=255) caACCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAc < 1:945983/99‑1 (MQ=255) aaCCAATTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAcc > 1:4995302/1‑99 (MQ=255) aaTTCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGAc > 1:3968008/1‑99 (MQ=255) ttCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACgg < 1:178090/99‑1 (MQ=255) gtCAGTCTCCGCCTGCCCACCAATCATGATGGGACGGTGTAAGGACAACACCAACAAAAACAGTAAGTTAGAAGTCTCAGCAAAACACCGACCAGACgg < 2:1481047/98‑1 (MQ=255) tCAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGt < 1:2099520/99‑1 (MQ=255) cAGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAAAAGAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTg < 2:647153/99‑1 (MQ=255) aGACTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTga < 2:4807807/99‑1 (MQ=255) gACCCCGCCTGCCCACCAATCATGGTTGGAGGGGGTAGGGACAACACCAGAAAGAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgag < 2:3324409/99‑1 (MQ=255) aCTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgagg < 1:823023/99‑1 (MQ=255) aCTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAAAAAAAAAAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACAAGACGGTgagg < 2:795363/99‑1 (MQ=255) cTCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgagga < 1:5096336/99‑1 (MQ=255) tCCGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgaggag < 1:1534315/99‑1 (MQ=255) cGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGAc < 2:3810470/99‑1 (MQ=255) cGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGAc < 1:770730/99‑1 (MQ=255) cGCCTGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGAc < 2:702889/99‑1 (MQ=255) | TTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGAC > NC_000913/2777882‑2778071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |